Gene detail

Detailed information of ENSQNNP00000012935.1 in Candelabrum cocksii

Genomic Location: not available for this species
NR annotation: XP_012555068.1, uncharacterized protein LOC100201077 isoform X2 [Hydra vulgaris]
Species Candelabrum cocksii · all data for this species · gene families

Sequence

CDS

Transcript

ENSQNNT00000013445

ttttttcgcAGGATAagagtttttactttttgggGGAAATCCCACGATTGCATTGAATACACTTGATTTGAGGGAAATTCCTGACAACGTTTCTAGCTGATAGGTTTATTGTAATACACAGAAAAGTGTTGGCATGCTATGATTAATGCATTGAAAGTGTATGATTTACTGTTGCAAATCCAGCACGAAATCTTTGATAACCCTACGGAGGCAAAAACATACTTTTGTGGTGTATTTCTCAAAAGAAAATCTTCTAAAGCTGATTTAGTTTTTCCTGTCGATGAGCACCATGTCAAAAATCAATCCACTTTTCGAAACAGCAAATATATTGCCAGCATCCTTTACAATTCTCCTCTCTCCACATTATGTGTATCACTAAACAGACAGACTGTTCTCGAGGCAGCATTCAAGGAGAGTTTGCCAACTAAACATAGTGTGATTACGGAGAGGAAACCATGCAATGTTGTTTGTCATTTGCTGAATGAGGATCTTTGCACCATTGGCACAGCCAGATCTTTAATGGTTTCCGCATTTCTCTGTAATCTATTTAACAATGATGTCATTACTCTGAACAATTGCAAAATCAAATGTATTGATGTCAATGAAGTTGAGGAATTTCTGGAGAAAGCGCAAAATGAGGACCACTCTTTGGATTATACCTTTTGCGATGAAAAGGCTGACGAAATCTTGCAAAAGCTAGAAAAGAACGTTGTGAATAAAAACGATGTGGTGTGGATGGAAATACCACGAAACAAACCAATCAAAGTGAAAGAACATGGACGGTATTTACCGTGCTTAATGGAAGCAGCTGCAATAATATCTCTACAAAAGAACAAGGATTGTGTACATGTGACTTCGCAACGGGAAGTTGTAAAAGAGGCAGTACTGTTAGCAAGTGCGTATCTGGAGAAGGATCTTAACCATATGTTTTGCTCTTACCCAACAACGAGGGGAGACACACTTGCTCAGTGGCTGAAATATAGAGAGGCAGAAGTTCGGGAATCATACGAGTTAAAGTTCGGCCAGCAAGTGGACAGCGACACCAGCTGTTGGAATACCGCCATCAACTCTGTGGCATGGGCCTCCTTCAAACTGGACATCCTGACCTCTACCAAGCAGTTGGATCCAAGGAAAATCGACTCTCGTAACAACctctttgttttgtataattACTCGAGAATTTGCAAACTTCTCCGACATTTTGAAGAGAAAGTGAGCCAAGGTGTTTACCCGCATTTATGGAACGTGAATGAAATTGATGTGTCTCTCTTGACGGCTAAGgcGGAGTGGCGTTTGTTCAGACAGTATATCCTCGCGTATCCGTTATTGTTGAGAGATTTAAAAGAAGCTAAAGGAAGCATCATATCTGGGCCGTCTAAATTGTGTCGTTTCCTTTACGATCTATCCCGCGACTTCAGTTCTTATTATCACCAAACGAAGGTTTTACTGGATGGCCGTGATCATTTGTTCCCTCTCATGATGACACGCATGCATCTTTGCATCTCCCTGCAACAGGTGATGGAGCACTCCTTCCAACTGCTAGCCGTGCACCCGCCCAAACAAATGTGACGTCACGCCTCGTACTTTAACTGGAAACCGCGACCGGACGCGGTATTGTCGCTATGGAAACGTACAAACAATGTGCTGTTCACTCGCATGGCGTTTTTACTTTGGTTTGCATTACAAAACCGCCCTGCAATGAAGGGAGAAAATCTAGATGTATGGAAACAAAACGTGTGCGACCTTCGTTACCTAGCAACGTGCTGTTGTCTTTAATCTCCACGTAATCCTGTTCACACGACATTCCGCCAATCACGTCCATGTATGTGAATTGCACGTCTGCTGCTCCCTCGTACGTCCAAACGCAATCGGTGTAAGGCGGGTACGTGAAACCGGCATCGGGAAGGAAGAACGGCGATTCGATCGTTCCGTTGCTAAGGAACAGCTCTCCACCGCACACTGAAATATTACGAGACAACAATTTTTGTGACTCATTATGTTATATTATGTTAGAAATGTTGTAAGTCGTTAACAATCGATGCTATACCAAAGCAGATCTCACCcgcaattttgaatttaagGTTGTTCCGGATTAAtcatgaataaaaaaattattctccGTGTACTACCTTTAGTTTGACTTTGCATGAAAACGGCTTTGAATCCAGACATCCTTCCGTACAGGTCCGCAGTGAATCGCAAAGTTATTGTATTGCTCGAACTCACAAATGCAATCGGCGGATAGAAGCAATAACTAAAAGGCAATAGTTAAAGGTTCCGTCCGTAGAATTGAGCTTATATCACAGTATTCACCAGGACTGAACCGGTCCTTCTTTTACAAATAACGAGTCTAAATGAACTGATCGGGGTTGCAACTAATCGAAGTATGCATACAATTAAGACATTTTTGCATTACGTTTAACTCGAATAAGTTGTGGCTTTGAGAGTAGTTGTGCGAGTAAATGGAAACATTGAAAGAATATTAAACTAAATGgattttgatttcttcaaaata

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6PJN8	DALR anticodon-binding domain-containing protein 3 OS=Mus musculus OX=10090 GN=Dalrd3 PE=2 SV=1
Q5D0E6	DALR anticodon-binding domain-containing protein 3 OS=Homo sapiens OX=9606 GN=DALRD3 PE=1 SV=2
Q641Y9	DALR anticodon-binding domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Dalrd3 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004627 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05746 all species →	DALR_1	DALR anticodon binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008909 all species →	Domain	DALR anticodon binding	Interproscan
IPR037380 all species →	Family	DALR anticodon-binding domain-containing protein 3	Interproscan
IPR009080 all species →	Homologous_superfamily	Aminoacyl-tRNA synthetase, class Ia, anticodon-binding	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16043 all species →	DALRD3 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004814 all species →	Molecular Function	arginine-tRNA ligase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006420 all species →	Biological Process	arginyl-tRNA aminoacylation	Interproscan
GO:0000049 all species →	Molecular Function	tRNA binding	Interproscan
GO:0106217 all species →	Biological Process	tRNA C3-cytosine methylation	Interproscan
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan
GO:0004812 all species →	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0006418 all species →	Biological Process	tRNA aminoacylation for protein translation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24973	DALRD3; DALR anticodon-binding domain-containing protein 3	-	Transfer RNA biogenesis	ko03016	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.