Gene detail

Detailed information of ENSQNNP00000013613.1 in Candelabrum cocksii

Genomic Location: not available for this species
NR annotation: XP_047140482.1, AP-3 complex subunit beta-1 isoform X2 [Hydra vulgaris]
Species Candelabrum cocksii · all data for this species · gene families

Sequence

CDS

ENSQNNT00000014130

ATGACTACTACCTATGATATGGAAGGTGCAGCATCACATTCTATGGGTTATTCTGTCTATGATAACAATAACCAATCAACAAGCTCCTCAACTCCTAGTCAAAGTGTGGTCTCATTTATCACGGGACAGTTTGGGAAAAGACACGATGATTTAAAGACCATGTTGGATAGCTCAAATAATGGGCAAAAACTGGATGCAATGAAAAGAATCGTTGCTaTGCTAGCATCTGGTAAAGACGTCTCAGAGTTGTTTCCAGCCGTggttaaaaatgttgtttcaaAGAACATTGAGGTGAAAAAGTTGGTGTATGTATACTTGGTGCGTTACGCAGAAGAACAACAAGATCTCGCTCTCCTCTCCATTGCTACATTTCAACGAGGACTAAAGGACCCCAACCAACTGATCAGGGCTAGTGCGTTGCGGGTTTTGTCTAGCATTCGGGTCCCAGTGATTGTGCCCATCATGATGTTATCATTAAAGGAAGCTGTCACAGATATGTCACCTTATGTCCGGAAAACCGCCGCTAACGCAATCTCCAAGCTTTACGGCCTGGATCCCTCTCAAAAGGAGCCATTGGTTGAGATCATTGAGAAGTTACTCCAGGATAAAACAACTCTAGTAGCAGGCAGTACGGTGATTGCCTTTGAGGTGGTGTGCCCCGAACGAATTGATCTGATCCACAGGAACTACCGTAAGCTTTGCAACATGCTCATTGACATAGATGAATGGGGACAAGTGGCCGTCATCAACATGCTGCTCAGATACGCAAGAACACAATTTCTTGACCCCAACTTGCTCCATAGCACCAATACAGATAAAAAATTCTACCCCAGTTCGCAGTCGGATGATAGTGGTACCAATGATGAAGAAGAACCGCGCAAAATGAACGCAATGGACAGTGATCATCGATTGCTCTTGAAGTCATGCCAGCCACTGCTGCAGAGTCGTAATTCAGCTGTGATAATGTCTGTGGCAAAGGTCTACCATCACATTGCTCCAAACTCCGAGGTTGGAATTGTTGTGAAAGCATTGGTCCGTCTTTTGAGAAGTCACAGGGAAGTTCAAAGCATTGTGCTCAGCAATATCATAACCATGTCACTTCAAAAGAAGggtCTGTTTGAATCCTacctcaaaacattttttgtgcaTACTGACGACCCCACACACATCAAGAAGCTCAAGTTGGAAATCATAACAAATCTCGCTAACGAATCAAATATTCCTCTTATCCTACGGGAACTACAGACATACATTTCATGTTCAGACAAAGACTTTGCCGCCTCAACCATTCAGTCCATCGGTCGTTGTGCGTCCAACATCCCAGAAGTTGCTGACACTTGCCTTGCTGGTCTTATACGAATGTTGTCTAATCGAGATGAGAATGTGGTGAGCGAAAGTATAATTGTTATCAAGAAATTGTTGCAGATGCGACAGAAAGATCACAGTGAGGTAATCACGCACATGGCGAAGTTGCTGGAGAAGGTGCATGTCCCGATGGCACGAGCGAGCATCATATGGCTGATTGGAGAGTACGCCGATAGAATACCAAAGATTGCCCCGGATGTCCTACGGAAAATGACATATTCAATTTTAATACCTAATATGGATGCCTAtACACGTTCACTGTGTCAGTACGTGCTGCAGATGTCAAAGTACGATCAGAATTACGACATTCGTGACCGAGCGAGGTTCATTAAGTTTATACTTTTCCCCGCGGACAAAACTGATgGAGGTAGTaacaatttgaagaaaaaggcGAAGAAGATTTTCCTGGTTGAGAAACCTGCTCCAGTGCTGCAGTCTTTATTCAAAGATCGTGGCCAGTACCAATTGGGATCATTGTCCCACATGATTGACGCAAAAGCTGCCGGTTACCAAGACTTGCCCGACTTCCCTGAAGAGCAACCTGATCCTACAGTTAGAAATGTTGAGatgcAGCCAGTTTATGGGAATCAGTTCTTATtgacaaaagaaaaaaggaaTGGAGAGACAGACTGCAAAGGGGCGTTTTATTCTTCGAGCgaagatgaagatgaggaAAGTGATGCGGAGGAGAGTGATTCAAGTGATGACGAGGACAGCCAGGAATCTAGTGCTGAAAATGATGAGGAATCAGCAGAAGtttttattcTTGCATTATTTCACATTATTCTTACTGATGATCTAAATTCTGCTCTGACGACCCATTCCCATCTTCTTGTTCAGCCCACCACAAGCATGCCATCTTATGAGCTTCTCAGCAAGATCAATGGGAAGGGTTTGGTTGTTAGTTATCGATTCACCAGAGCCCCTTGCGTTTTTTCACGCTCGATGGTTTCAATTGAAGTTGAATTTGTCAACAAAAGCAACAACGATGTGAAGAAGATACGAGTAGAAGATAAAGTAGGGAAATCTTATTTGTGCATAGCTGCTGGTGAGAGCTTGTATGTAAACATTGGTGTCGACTTTAAAGACACTATGCAGCCCGTTAATTTTCGGCTATGcaCGGAAACAGACAGATTTCCTGTAATCATTAAAGTTCCAGTTGGTGAGCTTACAAAAGGGGTCACACTGACCCAAGCTGACTTCACTGCACAGCAAATGAAACTGACTGGAATGACTGAGAGTACATTGGGGTGCGAATTGCCACCGACTTTGCACTTGAAGACCATTCAGGAAAAGATTCTGGAAGTTGCTAATATGACAATTTGTTCATCAACCACAGAAAACACTTTAAGATTTGCTAGCATACTGGTCTCCTCTGAATTGCCCGTGTTGCTATCAATAAAACAAGATGGCGCCTCCAGTGTTGTCATAGTGAACAGTGAGAAGATCAGCGTTGCTTCACTACTTGCCAAAGAGATCAAATCTACATTAATCAAGTTATAG

Transcript

ENSQNNT00000014130

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q13367	AP-3 complex subunit beta-2 OS=Homo sapiens OX=9606 GN=AP3B2 PE=1 SV=2
Q9JME5	AP-3 complex subunit beta-2 OS=Mus musculus OX=10090 GN=Ap3b2 PE=1 SV=2
Q7YRF1	AP-3 complex subunit beta-1 OS=Canis lupus familiaris OX=9615 GN=AP3B1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003541 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01602 all species →	Adaptin_N	Adaptin N terminal region	Repeat	Interproscan
PF14796 all species →	AP3B1_C	Clathrin-adaptor complex-3 beta-1 subunit C-terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR026739 all species →	Family	AP complex subunit beta	Interproscan
IPR002553 all species →	Domain	Clathrin/coatomer adaptor, adaptin-like, N-terminal	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR026740 all species →	Family	AP-3 complex subunit beta	Interproscan
IPR029390 all species →	Domain	AP-3 complex subunit beta, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11134 all species →	ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0030117 all species →	Cellular Component	membrane coat	Interproscan
GO:0030123 all species →	Cellular Component	AP-3 adaptor complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQNNP00000013613.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.