Gene detail

Detailed information of ENSQNNP00000015190.1 in Candelabrum cocksii

Genomic Location: :...
NR annotation: XP_047139689.1, katanin p60 ATPase-containing subunit A-like 2 isoform X1 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSQNNT00000015727

ATTcagttttgtgttttctttccaaatgcttttttcttattttatatCATGTTTCAAGAAATGTTGCCTCAATAATAATACCAAGCAAAATGACGGCTCAAGATTTGAGCTACCACCAGTTAAAAGCTTCCAACGATGCACGACTTGGTGAAGAACTACGAAGCGAGCAACGCAAACGAAATACCCTACTGCTTATACTTCATTATCTACACGAAGAAGGCTACACGTCGTCAGCAACCACACTGGAATCAGAAGTTGGCGTGAGTTTATTGAAGTTTGAGATTTGCGATAACATTGATTTACAAACGATAATACAGGAGTACGAGTCTTATTACTTCGTCAAGTTCAATAAATGGCCGAGAATATCGAAAAGGTGCAATGCAACCGACGGTAATGAAAGAAACAAGAGCAGCAAACTTCCCGGCAAGCAACCTTCAAGGAGGCCACCAAAAGCGAAAAGCTTTTCCTTGCCTCACATCGCATCCATTTCTGCGCACAGCGACTCCGAAGTCCATTTGAACAATTCGCCAAATGATCGAATGAAGAAGAAATATGAGaagcaaaaagaagaaaacaatcgcaaaaacaaacaagaagaaacaaagaaaaaagagGAGACAGCATTGGAGGCAGACAGTCTTTCTTTGCAAGGTGTATCCAGTCTAACAATCCCTAAAAGCAAGAAAGAACCACCCGCTAAAaaggCAATCGTGGACTATAAAGCTATTCTTTCGAATACATTACAGAGCGAATATCAAGAGACATCAGAGCGCCTGCTGAAGCCTCTAGGTGGTTACAGTGGCCTAACTGGCGAATTAAAAGAATTGGCAGCTATCATATCAAAAGATATCTACCTTGAAAATCCAGATGTCCGTTGGAAAGATATCATTGGCCTAGATGAGGCAAAACGATTGGTTAAGGAATCTGTCGTTTACCCAATCAAGTACCCTCAACTCTTTAATGGAATTCTGTCGCCATGGAAAGGCTTGCTATTGTACGGACCACCAGGTACTGGTAAAACTTTGCTGGCGAAAGCAGTCGCCACCGAGTGCAATACCACATTTTTCAATATCTCCGCCTCGACTATTGTGAGTAAATGGAGAGGAGATTCTGAGAAACTTGTTCGGGTTCTGTTTGAATTGGCTCGTTTCCATGCTCCCTCGACTATATTCCTCGATGAACTCGATTCGCTGATGGGGCAGCGAGGCGTATCAAACGCCAGCGGGGAACACGAAGGCAGCCGCCGCATGAAAACAGAACTATTGATGCAGATGGATGGACTCTCTAAGACAGACGATCTTGTATTTTTATTGGCCGCGTCGAATTTACCATGGGAGCTTGATAGAGCCATGTTGAGGCGGTTGGAGAAACGCATTTTAGTCGGATTGCCAACGGAGGAAGCGCGCGTCAAAATGCTCGAACATTTCCTTCCAGAACAGCAAAAACCAGTCGGCAATCAAGTGCAAGTTAATTCGAAGATCGACTATGAAGAGATAGCAAGGAAAACAGTTGGGTACTCCGGTTCCGACATCCGTTTGGTTTGCAAGGAGGCGGCCATGCGTCCAGTCCGCAAAATATTTGCTATCTTGGAGAACCATAACACAGGTGATAGCTTACCGGAGTTCCACGTGGATCCAGTTGTGACGTCAGATGTCACGTGTGCACTCGAAAGGACAAAACCGTCTGCGAGCAATTTGCTTGAGAGATACGAGCGATGGAAACAAGAGTTTGGAGCGGGTTAAAGAGTAAATAAGTCAAGGTTCATGTTCCCATTAACGTCGAGAAAACAAGGTGTCCTCGTTAAGATTTATTTACACGGGTAGGTTTTTTCATTTAACCCGAAggtctgattggttaaaattcTTTGCCTCAGTGGTGACGACCAATCagctttcaagtttacattcGAAGATGAGCTAGCTTAAATGTGGGTTTTACCCTATTTTTTATACTTCAAATCGCAATAGGGAAATTATGAACCTCGAAAATGTGGCtttcttgaaattttcttccgcctGGTTTCTTCTATCAAAGTGTTTTTATGAACGCCTTTATGGTAGTAATTAGGgacaatgtatatatataaaagcgaaaatttctaatatttctaaacaagtaaataatatatacataattaaaaaagaataaataaatagaattTAGTTTCATGTGGATTTTCTTTCACTTTTCTCTCGGTTTTGAGGTAGGGACATCAAGATTCATAACAAAATCGAGGCACTTATGGACCTTCTCTTGTTTTTGTTAGACAAACTTAATCTTTCGATATCCACACTTTGACCGGACAACGACGTTCCAATGTCGTCGGAACTAAAACTCGCTCGGTAAATCGCCGTGTACTGTCGAAAAGGTTTCGGTCGTTTAAATATCAACTCTCGTTCATCGAGAAACTCATCAGCAACTAAATCCCGACGACATTTCGCCGAGTGTGGTCGACTATTCATCATCGGCAACGCGCCTTCGACCTCGGAATCGCTCGAATCGTACGACGATCTTGTCGCTTTCAAAACTTTGAAGAATTTGCGCGCTTTACCGACCGCAGGTTTCTGATTTAGTTTCTCTAAACTTTCTCGCGTTCTGCCTTTTC

Protein

Uniprot

Uniprot term	Description
A0JMA9	Katanin p60 ATPase-containing subunit A-like 2 OS=Xenopus tropicalis OX=8364 GN=katnal2 PE=2 SV=1
Q9D3R6	Katanin p60 ATPase-containing subunit A-like 2 OS=Mus musculus OX=10090 GN=Katnal2 PE=2 SV=2
Q8IYT4	Katanin p60 ATPase-containing subunit A-like 2 OS=Homo sapiens OX=9606 GN=KATNAL2 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17862	AAA_lid_3	AAA+ lid domain	Domain	Interproscan
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR006594	Conserved_site	LIS1 homology motif	Interproscan
IPR050304	Family	Microtubule-severing AAA ATPase	Interproscan
IPR027497	Family	Katanin p60 ATPase-containing subunit A-like 2	Interproscan
IPR041569	Domain	AAA ATPase, AAA+ lid domain	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23074	AAA DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0140603	Molecular Function	obsolete ATP hydrolysis activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07767	KATNA1; katanin p60 ATPase-containing subunit A1	EC:5.6.1.1	Cytoskeleton proteins	ko04812	deepkoala