Gene detail

Detailed information of ENSQNNP00000016745.1 in Candelabrum cocksii

Genomic Location: not available for this species
NR annotation: CAH3173839.1, unnamed protein product [Porites evermanni]
Species abbreviation CCOCK · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6P806	Sorting and assembly machinery component 50 homolog OS=Xenopus tropicalis OX=8364 GN=samm50 PE=2 SV=1
Q6PA35	Sorting and assembly machinery component 50 homolog B OS=Xenopus laevis OX=8355 GN=samm50-b PE=2 SV=1
Q7ZWS5	Sorting and assembly machinery component 50 homolog A OS=Xenopus laevis OX=8355 GN=samm50-a PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004787 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07244 all species →	POTRA	Surface antigen variable number repeat	Domain	Interproscan
PF01103 all species →	Omp85	Omp85 superfamily domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010827 all species →	Domain	POTRA domain, BamA/TamA-like	Interproscan
IPR000184 all species →	Domain	Bacterial surface antigen (D15)	Interproscan
IPR034746 all species →	Domain	POTRA domain	Interproscan
IPR039910 all species →	Family	Surface antigen D15-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12815 all species →	SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0019867 all species →	Cellular Component	outer membrane	Interproscan
GO:0033108 all species →	Biological Process	mitochondrial respiratory chain complex assembly	Interproscan
GO:0045040 all species →	Biological Process	protein insertion into mitochondrial outer membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K07277	SAM50, TOB55, bamA; outer membrane protein insertion porin family	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.