Gene detail

Detailed information of ENSQNNP00000020439.1 in Candelabrum cocksii

Genomic Location: not available for this species
NR annotation: XP_047146387.1, tubulin tyrosine ligase 3-like [Hydra vulgaris]
Species Candelabrum cocksii · all data for this species · gene families

Sequence

CDS

Transcript

ENSQNNT00000021186

ATTGCAGAAAGAGCTAACAGTTTTAATGCATACACATCTACGAAGTTTTCTCCTAGTCGGCAGTATAAACTCTCCAAGAAACCTCATTCAACACCTTGTATAAAATCGCCGAATCTAAAAGAATGCAGTTTAACATCGAGCGATAGTAATTTGAGAAGAGGAAAATGTGCTAGTTCTACGGTCATGCACTTGAAAGGTAACAACTCCATCACTACTAAAATCCAAACACATGATGACTCTACAAAACACTCTGAGGTGGAAAATAGAGTTGGTGGCGGTGTGTTTACATCTGGCAAAAGGATTACATGTTGCCAGTCATCGAATAAAAacctagaaaataaaaatgacaaaaccctaaataaagaaaatcgCGTTGAAAATGACGTGGAATGCAAAAACAAAGATGTGACTAGAAAATGTGCAGACGAAAACCCAATTACTTCTGTACCATTTAAGTCTGAAGGTTTTGGCATCAGTTATCAATTGTTGCAGAAGTTAAAACGAATAGCATTCCAAGCAATACAGGATCAGAAGGTATTTATCTGTAATGGCCCCTACGCCAAGTTGCGTGGTGCCCTCTGGAACAGAGGTTGGattgagaagcatttcaaagtaaaaggtTCTAACGAGGAAATAAAGGTGAAGTTTTGTCACGATATCGAAGGCGAATATTTTACGGAGGCACATTGCGACATCATGTCACGGATTGTACGTCACGCTCCACCGACGTTTATTTGGACCATAAAACGTGAAAACATTTCCTTTATGCTTCTACGTAAAGAGCAAATAGTAAACCATTACATGTCGGCTTGGATGTTTACCACCAAGTCTGGTTTGTGCACGCATCTACGTAGTCTACGTCACTTTACCAATTGCACAGCTGACTTCTTCTTTCCGCGTTGTTATCGTTTATGTTgtgatgatgaaaaggatGACTTCTTGAATGACTTCCGCATGACTGCAATGCAAGGACTAATGAAAATCGTCCTTAGTAAAAGCAGCCATTGGAGAGTGATGGAGGAAAGGAAAAATGAGGGGAGCACGCCAGAAAGTGGAAAAAAACCCAGAAAGGTTCCAAAACCAGTGTCATCTGAATTGCTATTGGTTGCCTTTCGGACATGCTACGCGTTCTTGGATTCAAAAGCTCATTTAGATATCGAAGAAGACTTCGTCGCAGACTCGAATATCGATGATATGACTTGGCAGTCATTAattcaatattattataaaGTATCGaggtataaaatatataaatggaTACATCTAGTATGTTGATAAATTTTAACATCtaaaacatgttttgtttttggtgAAGAAGTTACAAAGATattacaaatgaaaattaaaaggtgCTTTATTTAGTTCGCATTATTTTgagtatttttatttcttgcatcaagataattattttatttacaggtttttttactttatatttattgatatttttattcGTTTATATTTGTTGAGATTTTTATTCGTTtctatttattgatattttattcACTTGATTATAtcttaatatttttatccTTTGTTTTCTGTTGCAATTTTTTGAATCTGCAGAAGAAAATTCTCTTCTATTCTTTGAGTATGAGATGGTTGCTTATGTACATAATGTTAAACAGTTCCCATCATGCACCCTGATATTTACAATAGAACAGTTCTAAAGAAatatactaataataatacagtacaatcctgaTAATTCAAACCCCCTTTAAGTcaaactcgaactgtttttcagttcctcttccctaatgttttctcataaaaactcccgataactcgaacattcgttatctcaaactattttactcggtctcttgggggtttgagttatcgggattatactgtatatagaATAGTAAAATAATAGATTtaatgtgtatatataaaatatattgaacTGAAGTACTTTGTTTCGATCCCAGATGGTCAAAGAATATTTCCCGGGTCAGGTCAGTTTTAAGTTAGTAAGGTTAATGTAGGAAATACAGAGAAAAAGTGGCGGAGCAGAAACATGATATATGACAACATCATTTTAAgattaaaaatacatttgtttttgttctttatttctttaagGTTAGAAAATTTATGTTTCCCAACACAGAAATCCAAATGTTATTTATCTCACTATCAATGAATGGAATAAATCATACAAGAATGCTATTTTACTTGTTACCATGGACAAAACCATTCATTTCATTGGTTAAAAAAGGCTCagacaaaaatttgtttgtcttcAACTGTTATTGTTGAGAATAGACT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q1ECV4	Tubulin monoglycylase TTLL3 OS=Danio rerio OX=7955 GN=ttll3 PE=2 SV=1
B2GUB3	Tubulin tyrosine ligase 3 OS=Xenopus tropicalis OX=8364 GN=ttll3 PE=1 SV=1
A4Q9F1	Protein monoglycylase TTLL8 OS=Mus musculus OX=10090 GN=Ttll8 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004986 (this species only)

Pfam domain

No Pfam domain signature was detected for ENSQNNP00000020439.1. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR051437 all species →	Family	Tubulin tyrosine ligase-like monoglycylase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45870 all species →	TUBULIN MONOGLYCYLASE TTLL3	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0015630 all species →	Cellular Component	microtubule cytoskeleton	Interproscan
GO:0018094 all species →	Biological Process	protein polyglycylation	Interproscan
GO:0070736 all species →	Molecular Function	protein-glycine ligase activity, initiating	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQNNP00000020439.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.