Gene detail

Detailed information of ENSQNNP00000020461.1 in Candelabrum cocksii

Genomic Location: not available for this species
NR annotation: XP_047125538.1, translation factor GUF1 homolog, mitochondrial [Hydra vulgaris]
Species Candelabrum cocksii · all data for this species · gene families

Sequence

CDS

Transcript

ENSQNNT00000021208

AGTGATTAAAAAATGCTTCATGCAGAACCATTATTGTTTCTCGTTGATTTTGCTTTAAACTTTCAATTTCTGGACCTGGGAATAACAGCTCAATGATCAAAAACATTCTACAGatacAAATTAgattatatgttatatatatatatatatatggactCTTGGCAATATTATTCAAAGAAATATGACACACTATCAGCTTAAGTGATGTTTCTGACTTTCTACAAGAGGTTTGGTACAAATGCAAAGTTTTTTCGAGTTATATTCTTTCGAACCAGATGCTACAGCAATGAAACCAATCCACCTTCAATGGAAAAGTTTATTGGGGATGATATCCGTAATTTTTCTATCATTGCTCATGTAGACCATGGGAAGAGCACGCTTGCGGATCGTCTTTTGGAGTTTACCGGAACGATTCAaccaaatatttcaaataaacaaGTGTTGGATAAACTCCAAGTTGAAAGGGAACGTGGTATCACTGTTAAAGCTCAAACTTCATCGATGTTTCATATACCTGCAGGGGAGAGAAAACcatgtttgtttaatttgattGACACACCTGGCCATGTGGATTTTAGCTACGAGGTGTCGCGTTCATTAGCAGCTTGTCAAGGAGCCTTGCTTATTGTTGATGCTGCGCAGGGTGTACAAGCACAAACTGTTGCGAACTTTTACAATGCTTTGAATGCTGGTTTAGAGATAATCCCAGTTATAAACAAGATTGATCTGCCAACAGCTGATGTAGAGCAGGTCTCACGACAAATCAATTCATTGTTCGACAAGAAGAGGGATATTGTTCAGGTATCTGCCAAAAAAGGCAAGGGAATCGGAAAGTTGTTGGAGACTATATACACTTCAATACCTAGTCCTTGCGCGGATATGGACGCAGACTTATCATTGCTTTTATTTGACTCATGGTTCGATATGTACCGAGGAGTCGTCGGTCTTGTGGCAGTCAAAAGTGGACAGCTAAGAAAAGGTGACCGATTACAATCCTTCCACACAAAGCActctttcgaatgttttgcgCTTGGTATTTTGCATCCCAATGAAAAACCTGTCGATGCCTTGTACGCCGGCCAAGTGGGATACATTGTGACTGGGATACGTGATATGAGCCAAACTTTAATCGGCGAAACTTGTTATCACACTGAGAAACCGGTTCCGCCAATCCCCGGTTTCAAGCAGCCAACACCCATGGTGTTCTCGGGAGTTTATCCCCCCGATCAAGCATCTTTTGTAAGTTTGAAACGCTCCATTGAGAAACTGTGTCTGAATGATTCGAGTGTTACAGTGCACCCAGATAGCAGTGTGGCGTTGGGACAGGGCTGGAGGATTGGTTTCATGGGATTACTTCACATGGATGTATTTAAGCAGAGACTGTTACAGGAATACAATGCCGACGTTATTGTCACTACTCCAAACGTACCCTACAGAGCTTTATTGAAGACCTGTGAGGAAGAACTTGAAATTCGAAGTCCGCAAGCTGTACGTTGTTTCTCCTACATACTGTTGCTTCACATGAAACTTCCATGTTGTTTCAGTTTCCCTCTCGTAGTGACGTCAATGTGTATTACGAACCGGTTGTCATGGGAACCTTGGTATTTCCTGATCGCTACATCGGGAAAGTGATGCATATATGCGAAGTAAGCTTTCGTTAGGGTCCGTTTTTAAAATTGGCATTTGCTTTTTTTGTGTCCCCAGAAAAGGCGCGGTGAACAAGTAAAAATGTCTTACATAGACGAatctcgaattttgatgaagtACAGGCTGCCTTTAAGCGAGATTGTTATCGATTTTTTTGACGCGTTGAAATCAGTTACGTCAGGTTTCGCGAGGTGAGTGAcgtttaaatataaaactgaCGGTCGCTGGAATACCGGTTCTGTTTTGCTTGCGAAATCTTCTACCCCATAAACAATGTTCTTTGACAATATCTTTCGCAGTTTCGACTACACTGAGGCAGGCTACGAACCTACGCAAATCGAGaaggtttttttatataagaataaCGAAGGCTGTCAACTGTTGGTTTCCTTTCAGTTGGAGATTCTTCTTAACGGAAACTCTGTGGACTCCTTGAGTACAATAGTTCACCAGAGTAAAGCCCATGCTGTCGGAAAGACGTATTGCTTGAAACTAAGAGAAACCATACCACG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8C3X4	Translation factor Guf1, mitochondrial OS=Mus musculus OX=10090 GN=Guf1 PE=1 SV=1
A6QLJ3	Translation factor GUF1, mitochondrial OS=Bos taurus OX=9913 GN=GUF1 PE=2 SV=1
Q8N442	Translation factor GUF1, mitochondrial OS=Homo sapiens OX=9606 GN=GUF1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002510 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00009 all species →	GTP_EFTU	Elongation factor Tu GTP binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009000 all species →	Homologous_superfamily	Translation protein, beta-barrel domain superfamily	Interproscan
IPR000795 all species →	Domain	Translational (tr)-type GTP-binding domain	Interproscan
IPR035647 all species →	Homologous_superfamily	EF-G domain III/V-like	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR005225 all species →	Domain	Small GTP-binding protein domain	Interproscan
IPR006297 all species →	Family	Elongation factor 4	Interproscan
IPR031157 all species →	Conserved_site	Tr-type G domain, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43512 all species →	TRANSLATION FACTOR GUF1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0043022 all species →	Molecular Function	ribosome binding	Interproscan
GO:0045727 all species →	Biological Process	positive regulation of translation	Interproscan
GO:0097177 all species →	Molecular Function	mitochondrial ribosome binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQNNP00000020461.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.