Gene detail

Detailed information of ENSQNNP00000020639.1 in Candelabrum cocksii

Genomic Location: :...
NR annotation: XP_047141875.1, ras association domain-containing protein 1 isoform X1 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSQNNT00000021390

CAGTCCTATAATATTGAATAGAACCTAGAGTTGAAATCTAAAACAACCCACTGTTGTGTTATGGAAAGCAACACGTTGGCTTATGTACATGATTGATTGATCGATTGATTTGAGATTGGcaacttttatttgtttgacGTTCGATTAAGTAGGCATTGTTTCACAACCGCAAAAGGATTACATGTTGTCCATGCAATTACATCAGACACTTGACTGATAAgtatcaaatatatttattgctCTGGGCAGCTTCTTACAATAACATTTGAGGAATAATGAGGCAGTGTTATGTTTGCTCGTATTGCCGCTACACTTGTCACAAGAAATGTGTGAGAGAGGTGTCTCTTGATTGCCCAAAAGCTCCCAgttcagaaaaatcttttgaagaTCTGACTAAAGAAGTCCAAGATGTTCTGGACTCGCACGATAATGCAGTGACGTTTAAATCGAAGAACAACAATCTTCCGAGTTTTGTGTCCTCGGTCGCCGAACTGCGCAGTCTCATTCATGAGTTTAACGAGAGCTCCCCCGTTATCATGAACCTGCATACCGACGGTACTTTCGACGGCTTCATACGCGTGCATATGAACTTAAAGCGACCGGTAAACGTGTCCGCGGACGTCGGTAATCTCACGCTTAAACGCGCCATGGCCAACAAGAGACTGTCGGACTCCAGACGACCACTCTCGGAGATGTTTAACCAGGAAACTGGCGCTAAATATGATTCCGGCATCGGTTCAGAGTCGGCCAGTTCGACTCTGTCGTCTATAGAATCTTCCGCCTTCACCACGATAGCTAAACGTCGCAAGCGCAACTCTCGACGGCTTAGTTTCTACTTGCCCAAAGGAACTTACAAGCCATTACATGTAACCAACACCACCACAGCAAGAGAGGTGATAAGTGCGCTTCTCTCCAAGTACAATGTGACAGATAACCCGAAAAAGTTTGCTCTCTACGAGAAATCTACCAACACTATTATAGAACACCAAAACAAAGATGTAATCTTTCGACGTCTCCAAGACGACGAAAATCCCTTGCTGTTGCGGTTGTCATGGGGAGCGAAAAATAACTCGAAAGCATTTGCACTTAAGGAAGACGAAGATGGCACCGTTCAGTGGATGAATTTTGAGGTTCCAGAACTTGTGAACTTTCTCGAAATTCTGCAGATCGAAGAGGATAGTTGCTACGCCCAGATTTTACAAAAGTATGAACGCTATGCAGAGGCTTTACGCAAGGCCCTCGAGTTAAATTCGACTGGTGAAGAGACATGGTAGGCTGGGACCTAGGGACTCAGCCAATCACAGGTCTACCTGTCACAACAGAGTATTTTTACAGGCAATAAATCTtgtgatatattttttagtatATATGTAACTTACTTTTTTTACTTCTTCGTGTTTTTTTTACCCTcgatttttgtttacaattattatattatttgtttagcggaaaaatatttattgttttttttcgttattattttttattacgtAACCAGGGATTTTTACATTTGGTTTTCACAGGAATCTATTAAACCAACTAAtagtattattaaaaaaacaattgtgtatataaattgaaaataatgtAAAATTAACGCAATAAAATCTCATCATACGTCAAATGATATTCTCTCTCTTGTTATCGTTCAAAGAAGAACTTTACGTTGTCTTTAACGGGAATGCTATGACAGCTAACTGGATGCTCGAAGATGAAATTTTCTTAGAATCGTGTATTCTTATTAGAGCCCATCTTACGTTTTAGTTTTacaatattcttatttattgaGGCACAGTTTTGCATCACGCTTCTGATGATATGTGATCATTTCAAGcagttattaaattaaactggGGTGTCAGTTCATGTGTAAAGTTTTTTCATACGCGGCTGACTTGAGGCATGGCTGCGCTTAATGAAGCAAGCATAGATGTCAAGAGCGTGCTCAGAGCTCGAATCTCTTCACCAGATAAGAGATGCTGTGGGAACGGCTTCTTTGCATATTAGCGACTTCGTTTTTCGTTTGGAGTTGCGAACCAGAAGATAACGACGAACGTCAGTAATCAAGTTGAAGTTTTTTTTCCCGATTCAAATCCTATCTTGtcatgtatttttaaaagcgCAACGCTGTTTTACTCGTTGTT

Protein

Uniprot

Uniprot term	Description
Q5EBH1	Ras association domain-containing protein 5 OS=Mus musculus OX=10090 GN=Rassf5 PE=1 SV=1
Q8WWW0	Ras association domain-containing protein 5 OS=Homo sapiens OX=9606 GN=RASSF5 PE=1 SV=1
O35141	Ras association domain-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Rassf5 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16517	Nore1-SARAH	Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain	Domain	Interproscan
PF00788	RA	Ras association (RalGDS/AF-6) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR046349	Homologous_superfamily	C1-like domain superfamily	Interproscan
IPR011524	Domain	SARAH domain	Interproscan
IPR000159	Domain	Ras-associating domain	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR033614	Family	Ras association domain-containing protein 1-6	Interproscan
IPR002219	Domain	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22738	RASSF	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0007165	Biological Process	signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09850	RASSF1; Ras association domain-containing protein 1	-	Non-small cell lung cancer	ko05223	deepkoala