Gene detail

Detailed information of ENSQNNP00000021954.1 in Candelabrum cocksii

Genomic Location: :...
NR annotation: XP_012567064.2, muskelin [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSQNNT00000022744

ATGTGCTTGAAACATTTTCGTCAGAAGAATTATACAGAGGTATTTGAGGCACTACAAAAGAGGTCAAAAGTGGCACTGGAAGATCCCATCTTAACTGAATTACATACTAATTTGGTAGGATATCTTTTCTTATCTTAATTAAAACTTGAAGCATTAAGTTGAATAGAAagaatactatatatatttttcttctgcttctggtttttctttaatttaagGTAAAACAAGGGAATTTTAAAAGAGCTGAGGATATTATTCAAGATTCCGATGGTGTTGAGAGTGATGACTGTCACCCGGGTATGAGAGGTGGCCATCAAATGTGCATCGACGTAGACCAACAATTGATATTTTTGCTCGGAGGATGGGATGGAACCAAAGACCTTGCAGATTTTTGGGTGTATAACATCCAAGCCGGAGAGTGGCATTGTATATCAGAGAATACCGAACTTGATGGTGGCCCATCTGCACGTTCCTGTCATAAAATGTGCTTCGTATCGAAGCCAAGATGTCTGTATATCCTCGGCCGATTTCTTGATGGCAAACGAATGAATGTGGAAATGAAGAGTGATTTTTTCAAATACGGTCTTGATACAGGCCTATGGGAATGCATATCTGAAGATACATACTCTGAAGGAGGGCCTCATTTGCTGTTTGATCATCAGaTGGCTTATGACCAAATTACTGAAAGAATCTTTGTTTTTGGAGGAAGATCATTGTTGACTGGTATAACCGACATAGAGCCAACATTTAGTGGATTGTACTCTTACCATGTTTCACACTGTACATGGATAAAAATCAAagaTGACTGCAATTGTTCTCCGTCAAACAATCAGATGTTGTCGAGAAGTGGACATTCCATGCTTCTGGACAAAAGCAGTCgacttttgtatatttttgccGGCCATCGAGGAAGGAACAGAGAAAGTGTCAATGATTTTTTCACATACAACATTGATACAGAAGAGATAATAACACGAGTGGATAACAAAGATTTACCTTCCAATGAGTTCACTCAACGCGCAACAATCGACATAAACATGGGAGAGATATACGTGCTCTTTGACTCAAATCGCGAAGGAGAGAAGAAGGACGAACCAGTACGCAACTCGTTTTGGGTCTACAATATAAAGCATAAGAAGTGGACATGcatatacaaaaacaacaacgttaaCCAGTTGTACTGGAAAAAGTCAAAAACTGTTGAACCACGTCCACGATTTGCGTATCAAATTGTTTACGACCCAAAAAATAGGGTGCATTTCATGTTTGGAGGGAATCCTGGGGGATGGTCTTATTTGAAAGTGCGATTGGATGACTTCTGGATGCTCAAGCTGGAAAGATCCAGCTGTAAAGATTTGCTGCAACATTGCAAGTTTATCATCAGGAAGCTAAGATTCAAAGAGTTGAGCGAGGAAGATCCAATGGAATCATTACGTTATCTCCAGGATGAAGTGTCGGATGTGATTGACCACAATAATCCTGCGGAGAGAGATATTtTTGAAGAATTAGCTTCAGTATTGTTTGCTCCTGCTCCCTCAGGTTCCAGTGATGAAGAATCTGCCACAGATCAACctAATACAACATCTTCGCAGCAATATAAATCTCGTACACTTgTTTTCAATGAATTGACAAAATACTTTCCCGCCAGCATGGTACAACCGACTGGTGAAATCACAGATTTTGTTGACATAAAATTTTAATGCCGAAGATGATGCTCCTGAAAAAcggaaaatatgtttttcacTTTTATAATGAACGCCTGAATCGTTTGAttgagtttttattttcattactTAGATTTCCTCCtaagaatttgtttttgtgaaataGACTTTATTGTATACATTAATTGTGTATTTATTTCTACGTTTTAAAATGTAAGTATTTTATACTGAAAAATGTCGTCTAAAGAGAAGTTACTGATCTTGTTGTGAATTGATTCCATTCTTGAGATAGTTTAGTTTCGTTTAGTTGAATTTTCATCACCAATACACTTGTATAATAGCTATGTGGTAAACACGAATGCCAGAAGCTTCATTTTGGTAGAGGTTAAAACTGTTTTCTGCATATTGTGGAAC

Protein

Uniprot

Uniprot term	Description
O89050	Muskelin OS=Mus musculus OX=10090 GN=Mkln1 PE=1 SV=1
Q99PV3	Muskelin OS=Rattus norvegicus OX=10116 GN=Mkln1 PE=1 SV=1
Q9UL63	Muskelin OS=Homo sapiens OX=9606 GN=MKLN1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13415	Kelch_3	Galactose oxidase, central domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052456	Family	CTLH complex component protein	Interproscan
IPR015915	Homologous_superfamily	Kelch-type beta propeller	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15526	MUSKELIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23337	MKLN1; muskelin	-	Ubiquitin system	ko04121	deepkoala