Gene detail

Detailed information of ENSQNNP00000022243.1 in Candelabrum cocksii

Genomic Location: :...
NR annotation: XP_047128453.1, leucine-rich repeat serine/threonine-protein kinase 1-like [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSQNNT00000023041

ATGTCAAGATTAAAAACACCAAAGGATCTTGGTTTAGTCTTTTGTTATGAAGGAGAATTTCTACACCAAGCTGCTCATGATGATAACATAGAGTGGCTTGAAGGCCTCTTGCAAAACGATTATAATGGGACAGTTCATTCAACAGATGAAATGGGACGCACACCACTTCATATCGCAGCATCAAGTGGAAGTAAAAATTGTCTGGAGATGTTATTGAAACGAGGAGcTAAACCAAATGTATGCTCTGGGTTTGAGGATCAGTGCTTTACGCCATTGCACCACGCTGTGGCTGAAGGAAACTTGGAATGTGTGAAAATACTGTTGAAATATGAGACTAGCTTGGATTTAAGGAACAGCTGTGGACAACGACCCCTTGAACTTGCTAAGGTTATTGGACCAACAGCCAGTGAATGTGCCAATTATATCAGAAAAGTCATGGCGCAACGCCTCATGGAAATTGAACAGGCCAAAGGAGAAGaTCTATATGATATGGTTGTCGAGGGGAACTTTAATGGAGCTAAAGAGATTCTTGAGAATATGAAGGATCCATTATCGTTGATTAACGGTTATTATCGCGGTCCGAATACCTTGTTGTACAGGTCCACATTCCAGGGCCACAAAGATATTGTGCAGTTGTTAATCGATTACAAAGCTGATGGACGGCCAAATTCCGAAAGTGCTCTTACGCCTTTATATGCCGCCTGTTATCACGGCCATTATGATATTGCTGTCATTTTGGCTCACTACTTCCCCAAACATCTCACCATGCCGGTGACAATCAATCAAACTTACCCGTTGCATGCTGCTGTTATGAAAGGAAAGAtaaaaatcattgagtttttACTGGCACTACGTGATCAGCGAGGCAGAAGTAGAGAAGATTCCATCGAGGGAGAGTTTGAGCGCACCTATCCTCCATTGCATCGAAGTCATTCTTTTTTTGTGATTGCGTTAGATTGTTCCAACATGCAGTACTACGTCGACATTAATCAGCCAATAGATAATGGTTACACACCGTTACATATTGCGGTTATGTACAAGCAACGGGAGAGTGTGAAGCTTTTGCTGAAATGTCAACCTATCATCTCCGAAAGTTTTATTATTGTTCCTGGTTGCTTGGTGATAGATAAGCTCTGCAATATGAAGACTCCGTTTCATCTTGCGTTGATAGTGGACGCAGTTGAAATTGCAGAGTTACTCATCCAGAATGGTGCTGATAAAGATTGTAAAtttgatgatgttgatgacATGTGCACACCTTTGCAATATGTTTGCAACCATCAAAAAAAGGACGCTATAGCCATGTTGCTGAGAAACAAAGTGCAGGATATGAAAGGAGCGGCCTTGCGGCAGGCAGCTAAAGACGAGAAGAATGATATTGTGTACATTTTGCTTCAAGATGGTATTTACGATGATGAGTGCGAGATTGTTTTAGCTGCTAATGAGTTGGAGTTAAATTTGAAACCTATTTATCTTCATTGGAATGAGCGTTTTTTAGATTTTGTCTCAGAGCAATGGTTTGTCGATGTTGCATGTCGGTCTGTTACCCAGTCACAAATTGATATTTCTTTGTCACTGAagctttttacttttattaacCTCTCAAAGAACTTGTTATCTTCCGTTCCAATGGTGCTGTTTCAGATGCCATCTctgaaagttttaaatttatctGAGAATAAAATTTCTGAACTGCCTATACCAAAAGCTACTCAAGAAGATCCATTCTTGGTGGATGAAAGCAATACTGGTGTGACCGGAACTGAAAACTGGAACTGTCCAAGCTTAAGCAAGCTGTTTCTCAACCATAACGAACTGGAAACAGTTCCTGAGAGTGTCTTTCAAATGCCAGCGCTGCAGGATCTTGACATTAAGAACAACTCCATCACTGCGTTGCCGTTCAACATGTGGTTGTCGAAAACACTTGATGTATTGGATGCATCTCATAACAAATTGAAATCTCTGCCAATGTTTACTAGTGATGGCAACAAAAAGAAGGGCAAAGAACctggaaagaaaaagaaacaTCGGAAAAGTATTTTCGCCAGGACCTCAACACTGTACAGTAAACGTCCTACGTGGGAAGATAACACCGACTCCGAGGAAGAAGATGGAGATGAACCTATTTCCACTCATACTTTCACAAAGCTTGATTTATCGCACAATGACTTTTCCACATTTCCTGTTTGCCTGCCGTGTTTGGCACCAGATTTATCAGGATTAAACATGAGCCACAACAAAATAACAGAAATTTCCAGTGTTTCAATGTTTCCGAGAAACATATCGTACATTGACTTGTCAGACAATCGTTTGAAGTGTTTGCACTTTTCAAGTTCAGAAGTTCTTGAGTGTAATTCTCCAACAAAGCACCAGCCGCAGAATCGTGTTTCATACCCAAATATAAACATCACAAAGTTTTGCCAACACCGCCGACATAGATCCTTGATACGTCTTGTGAGTCTGAAACTTGAAAATAACTTGCTTGAACATGTGAGTTTTAAAACCGCCACATCAGACGTTTTCTGTGAAGGCCTAAAAAATCTGAATCtctcaaaaaataaacttacaTTGCTTCCTAAAGACATTGGGAAGCTCAGTCACTTGGGAACTCTCTCCATCACTGAAAACCCTAAAATGACCAGCATTCCTTCTGAGCTCGGGCTTTGCTCGCGTCTTTTCTCTTTAAACCTCGATCCTGCGCTTCTTTATGCTGCACAATTGccaaaaaatgttattgaaaattaCGAAAAGGGAAGCGGAAATTATTCTTTGTTGGGTTATTTGAAGTCTCTACATGACAAAGCACAGCCCTTTCCAAACATCAAGCTTATGCTTGTGGGAAAGCATTATATCGGAAAGACAACATTACTGGATTGTTTGCGAAAAGAAGGCACTGGCACTTATCAACAACATCCCCATTTTGCAGGCATGAAAGGTAAACCTGCCAACTTGAGTACGGTAGGTGTGAATGTGTGTGACTGGGAATACGAGATTAACAAGAAAGTCGTTAAATTCAGCACTTGGGATTTCGCTGGACAGaaagaGTACTATGCTACGCACCAGTGCTTTCTCTCCAAAAGAGCCATTTATCTTCTTCTATGGAACATGGCTGATGGAGATGATGCAATTGCTGATCTAGAATCTTGGCTCCTAAATATCCAAATGCGAGCTGCCAATTCCTCAGTCATCATTGTCGGAACGCACGCagataaaattgaaaaaagacaTTTTGATGACATCGTCAAAAGAAAGCAGTTATTGATCAAAGAGCGCTTTGTGTCAACTGAATATGGCGGAGGCGTGAGGACTCCTTCACTGAAAGGCTTGCCCAAAGTTGTTGCTGTTATATCTGTCAGCTGTGTTACCAAATACAACATCAACGATCTTCGCAATCTGGTACATTACACGGCAATCCATTTGAAAGGAGAAGGGAAGGACCGAAGTATATGTTTATTGGACAAAGCCATCCCCGCTTCTTACATTGCTGTGGACAAAGCTATTTCAGTTGTTTCAAGTTCTCTGCAAAACGAGATACCAGTTCTCGATTCGAAAACATTCAGGTCAAAAATACACGAACAGTTAAAGGCAATGAAAGCTGAACTAAAGAATGAAAACCAAGAATTGGATCAAGCCGTTGAGTTTCTACATGGCTATGGAAGTCTTCTGCATTTCGATGATCCATCTTTGAACGACTTGTATTTCGTGAACCCTCAATGGCTTTGCGACTTGTTGGCGCATATCGTTACAGTGAAGAGTGTGAATCCATGCATCAAAAACGGATTATTGAAGATTTCCGATCTGCAGAATCAGATTTTTCACGGAGAAAACCGCTTTCCTGCCAGCATGATACAAAAGTATGTCGAATTGCTTAATCGATTCGAAGTCGCTATTAAGATTTCGAACATATTCCTCCTCATCCCATCGCTGTTACCTGAGAAACAAGTCGAGTGTCCAATAATGAATGAGCAAGAATCGACTGAGATCAGAAAGGCCATGGATATCCAGGCCTATCTTCAAAAAAGAGTTTTTCGGCGCCAGTATTTGATGTCGTACATTCCGAGTGGGTTCTGGTCCAGACTGCTTACTAGAATGATTGCCGACGATCGATTCTGCAAGATGGTTTCATCGTGTTGTGAGATCCAGGGAAGCACTGATCCCGAGAGCGCCCTTCAGGATGCGCAAAGACTCATGAACACTGCTCCGCCGGAATGGGCCTGCTGGAAAACCGGACTCGAGTTGTCATGCTTTGGAACAAAACTACTTCGCGTGTGCCAACTGCCACTCAGTGCATCATTTTATGGGGCAGATGGTAAAGCACCGCCAGTTTTCGTGAAGAATCCCAACACGGAGGTCCCGGATAAGCTGACTTTAGAGATAATAGCTCCTTGCTTGAAGTTGAATGTAGAGAAATTCATACGATATCGTTGCTCAAACAATGATGACGAGTTATTGGAGTTTCGTGTGACAGGCATCAATTATTCGTCATCCATGATAGCATGTCAGCTCTTTGTAAACGCTATCGACCATATAGACAATCTCCTGGCTGAGTGGTTTCCAAAGCTCGATCAGCAGGTAGACGGGCAAGGTATCAAGTCTGTCCGCAGGGTTTCGTTTTGTCCCACTTGCATACAACATACAATCAAGGGAAAGAAGAGAACCAATCGGCTAAGCTTTCACAGTGGGGCCTCTGGCTCATATGTTTTTCAGGGAGATATGACTCCTGATCTTGAAGAGCTTTTGGAAGAAGAATGCGCCGTGGAAGCTGAGGAGGATGAAGTGTACGAACCGCCCGTCGATTTAAGCGACGTCGAACTGAAAACACTAGGAGAGTATCGAATGTTAGCGAAGGACTCCACCGTTGCGTTTGAACTGGAGGAAGGGACGAAATTACTGAGGAGTGGCAAAGCTATTTACTGTCCGTTTCATTACAAAGTCAATTTCGAGGAGGTTTTTCCAGATTTGTGCTTTGTGGACCTGGATCCTAAATACGTGCTTCATCCCGAGCGCATCAAGCAGGGCGATTATCTTGCGCAAGGAGGCTTTGGCAAGGTGTACAAATCCCAGCTACTACTCGATGAACGGGGTGTGGTTGACGCCGCTATGAAAGTTTCACTGAGTGAGAAGTCTTGCCCCGATATGGATGAGGTCATTTCTTATGACGCGTACAGGAATATTCGCCAGGAGGTGGCCATTCTCATACCGTTACGTCATCGCAACATTGTTGAGTTTCTTGGCGTGTCGTTCAACCCATTGGCGATGTTCCTACAGCTGGCGCCTGGCGGTTCGCTCAACGACCACCTAAAGGTGTACAGAGAGGCGAGTAAGAAAGTCAGTTCGTTCGTTATAACAGAGGCGTTACGACAGATCAGCTCCGCGTTGAGATACCTGCATCGGCATGATATCATATATCGCGACTTGAAATGTGAGAACGTGTTAGTGTGGGACTTCCCTTCACCGGTTGCCGACAGCGATGATTACACGCACAAAGGCGCACCCGTGGCGTTGCAACTCACCGATTACGGCATCAGCCGGGCAGTGTCTATTGGCGGCAATAAAGGCTACTGGGGCACGCACGGCTACATAGCCCCCGAAATTTTACGATACATGGGCAAGGAGTGCTATTCCTCTAAGGTCGATTGCTTTTCCTTCGGTTGCGTCATTTACGAAATGCTCGCTCTAAATCGGCCTTTCTACGACATCTCGAAAACAGAAATCATCAAACAGTACATCATGGAAGGAAAGCGGCCACGTCTGACGTACAGAGAGCGTAGGTACCCTGTTCTACTGCTCTCATTGCTTTACAAATGCTGGGGTCATAACCCTGATGATCGACCTACCGCTTCTGAAATCAACTCTTTAACATCACTATCTGAATTCCCCGCTCTCATGGACGTGAGAGGTCTCGGCGAATCATTTGATTTTCAGTGCGTTGTTACTAGCAACCAGAGTCAATCTAACGAACACGTGATTGACAGCCGGAACGTGATTGGTTCGCACCTGTGGTTTTGCGGCAGTCATGGAGAAACTATGCACAGGGAGGGATTTGTCACCGTGTGTTATTACAACGAGAATAAATATAACCACGTCATAAACATTAAAGTAAAGGAAAAAGTGACTGTAGCCTGCAGCGTTGGCAGCACTATTTGGTTGGGCACGGAGGGCGGTGCTATTATGGTATACTGCTCGCTAACGTACAAACTACTTGCCAAGGGAGCTTGTCAGAGTCGCGGATACATCTTGAAAGTCCTGCATTGTCCTGTGTTTAACTTAGTGTTGTTTACGATGTCGGATGGCATTGTGCTTTCATTCCACGACACTTTGAGCACGTACGAGTTTATTCAGCCTTCCACAAACAGCGACAATAATCCACCGCACCCTATCACCCGAATCAAGCACTTGACATCAAACAGAAATTTAGCGTTCGAAAGCGCCATCCATTGCGTTGCCGTGGCAGCGAATCGTTGCTCCGCGCAACCTTCAAAGGATTCTGGGTATTGCACACCCCCGGAAACTGTTGAGTCGTCGTTCGAGTTGTGGTGCGGACAGGAGAAAGGACTTGTCACTATTCTCGATGTGAACACTCTCAGAAAGAAAGAATCATTTCCGGCCAAAGGCAACAACATGTTTGATCCGATGCTCGAAGACCTCATTGTTACGTTCTTGGAGACGAGCCGCAGCTTTGACGTCATCACGCCGAACGCTCCCTCCAACTGTCTGTCGAATTATATCTGGTCTGTGGTCTTTCCTGGCACCTACGTGGAACGGAGGAGCATAGAAAGTAGACAGGTTGAAGGGATGTTCGATGCGAGCCAGCACTCACCGCAACATAATTTGAATTCGCCAAAGAACACTCGCTACGCTAAACCACTTCCAGGGGATGACGCGCAGATTCAATCCTTGGTTATTGTCGAAGAAATCATGTATGTCGGAACATCATTTGGGTGCATGATATTCTGCGATGCCCTCACCATGATTCCTTACTCAGTGATACGTTGCTATAAATTACTGGTGGAGGCGATCATACCGTTCAGGATGTTTTCGAACAAATCGTCGAACAACAGAGAAAGAAAGATTGTGCTCAGTTGTGGTCGCAAATGCTTGGACAACTGGAAACAAAATTTCGAAAAGTCTGTAAGCAAAGAAATGACTATATTAACCTGGCGCTCAGTCTACTCCCCTCTCTCGTGA

Transcript

ENSQNNT00000023041

Protein

ENSQNNP00000022243.1

MSRLKTPKDLGLVFCYEGEFLHQAAHDDNIEWLEGLLQNDYNGTVHSTDEMGRTPLHIAASSGSKNCLEMLLKRGAKPNVCSGFEDQCFTPLHHAVAEGNLECVKILLKYETSLDLRNSCGQRPLELAKVIGPTASECANYIRKVMAQRLMEIEQAKGEDLYDMVVEGNFNGAKEILENMKDPLSLINGYYRGPNTLLYRSTFQGHKDIVQLLIDYKADGRPNSESALTPLYAACYHGHYDIAVILAHYFPKHLTMPVTINQTYPLHAAVMKGKIKIIEFLLALRDQRGRSREDSIEGEFERTYPPLHRSHSFFVIALDCSNMQYYVDINQPIDNGYTPLHIAVMYKQRESVKLLLKCQPIISESFIIVPGCLVIDKLCNMKTPFHLALIVDAVEIAELLIQNGADKDCKFDDVDDMCTPLQYVCNHQKKDAIAMLLRNKVQDMKGAALRQAAKDEKNDIVYILLQDGIYDDECEIVLAANELELNLKPIYLHWNERFLDFVSEQWFVDVACRSVTQSQIDISLSLKLFTFINLSKNLLSSVPMVLFQMPSLKVLNLSENKISELPIPKATQEDPFLVDESNTGVTGTENWNCPSLSKLFLNHNELETVPESVFQMPALQDLDIKNNSITALPFNMWLSKTLDVLDASHNKLKSLPMFTSDGNKKKGKEPGKKKKHRKSIFARTSTLYSKRPTWEDNTDSEEEDGDEPISTHTFTKLDLSHNDFSTFPVCLPCLAPDLSGLNMSHNKITEISSVSMFPRNISYIDLSDNRLKCLHFSSSEVLECNSPTKHQPQNRVSYPNINITKFCQHRRHRSLIRLVSLKLENNLLEHVSFKTATSDVFCEGLKNLNLSKNKLTLLPKDIGKLSHLGTLSITENPKMTSIPSELGLCSRLFSLNLDPALLYAAQLPKNVIENYEKGSGNYSLLGYLKSLHDKAQPFPNIKLMLVGKHYIGKTTLLDCLRKEGTGTYQQHPHFAGMKGKPANLSTVGVNVCDWEYEINKKVVKFSTWDFAGQKEYYATHQCFLSKRAIYLLLWNMADGDDAIADLESWLLNIQMRAANSSVIIVGTHADKIEKRHFDDIVKRKQLLIKERFVSTEYGGGVRTPSLKGLPKVVAVISVSCVTKYNINDLRNLVHYTAIHLKGEGKDRSICLLDKAIPASYIAVDKAISVVSSSLQNEIPVLDSKTFRSKIHEQLKAMKAELKNENQELDQAVEFLHGYGSLLHFDDPSLNDLYFVNPQWLCDLLAHIVTVKSVNPCIKNGLLKISDLQNQIFHGENRFPASMIQKYVELLNRFEVAIKISNIFLLIPSLLPEKQVECPIMNEQESTEIRKAMDIQAYLQKRVFRRQYLMSYIPSGFWSRLLTRMIADDRFCKMVSSCCEIQGSTDPESALQDAQRLMNTAPPEWACWKTGLELSCFGTKLLRVCQLPLSASFYGADGKAPPVFVKNPNTEVPDKLTLEIIAPCLKLNVEKFIRYRCSNNDDELLEFRVTGINYSSSMIACQLFVNAIDHIDNLLAEWFPKLDQQVDGQGIKSVRRVSFCPTCIQHTIKGKKRTNRLSFHSGASGSYVFQGDMTPDLEELLEEECAVEAEEDEVYEPPVDLSDVELKTLGEYRMLAKDSTVAFELEEGTKLLRSGKAIYCPFHYKVNFEEVFPDLCFVDLDPKYVLHPERIKQGDYLAQGGFGKVYKSQLLLDERGVVDAAMKVSLSEKSCPDMDEVISYDAYRNIRQEVAILIPLRHRNIVEFLGVSFNPLAMFLQLAPGGSLNDHLKVYREASKKVSSFVITEALRQISSALRYLHRHDIIYRDLKCENVLVWDFPSPVADSDDYTHKGAPVALQLTDYGISRAVSIGGNKGYWGTHGYIAPEILRYMGKECYSSKVDCFSFGCVIYEMLALNRPFYDISKTEIIKQYIMEGKRPRLTYRERRYPVLLLSLLYKCWGHNPDDRPTASEINSLTSLSEFPALMDVRGLGESFDFQCVVTSNQSQSNEHVIDSRNVIGSHLWFCGSHGETMHREGFVTVCYYNENKYNHVINIKVKEKVTVACSVGSTIWLGTEGGAIMVYCSLTYKLLAKGACQSRGYILKVLHCPVFNLVLFTMSDGIVLSFHDTLSTYEFIQPSTNSDNNPPHPITRIKHLTSNRNLAFESAIHCVAVAANRCSAQPSKDSGYCTPPETVESSFELWCGQEKGLVTILDVNTLRKKESFPAKGNNMFDPMLEDLIVTFLETSRSFDVITPNAPSNCLSNYIWSVVFPGTYVERRSIESRQVEGMFDASQHSPQHNLNSPKNTRYAKPLPGDDAQIQSLVIVEEIMYVGTSFGCMIFCDALTMIPYSVIRCYKLLVEAIIPFRMFSNKSSNNRERKIVLSCGRKCLDNWKQNFEKSVSKEMTILTWRSVYSPLS

Uniprot

Uniprot term	Description
Q9TZM3	Leucine-rich repeat serine/threonine-protein kinase 1 OS=Caenorhabditis elegans OX=6239 GN=lrk-1 PE=1 SV=6
Q3UHC2	Leucine-rich repeat serine/threonine-protein kinase 1 OS=Mus musculus OX=10090 GN=Lrrk1 PE=1 SV=1
Q38SD2	Leucine-rich repeat serine/threonine-protein kinase 1 OS=Homo sapiens OX=9606 GN=LRRK1 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF16095	COR	C-terminal of Roc, COR, domain	Family	Interproscan
PF00023	Ank	Ankyrin repeat	Repeat	Interproscan
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF08477	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan
PF13855	LRR_8	Leucine rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR032171	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR020859	Domain	Roc domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR003591	Repeat	Leucine-rich repeat, typical subtype	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24198	ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan