Gene detail

Detailed information of ENSQNNP00000023366.1 in Candelabrum cocksii

Genomic Location: not available for this species
NR annotation: XP_047127490.1, AFG1-like ATPase isoform X1 [Hydra vulgaris]
Species Candelabrum cocksii · all data for this species · gene families

Sequence

CDS

Transcript

ENSQNNT00000024222

CCGACGAAATTTCCAAAGAAACCTGATGATGGAAAGTGGAGAGAAGACTTTAAATGAGAAATTCCAAAACTTGAAtactgatgattcaacatgtTTTCTACAAGCAATGTTTTTCACAGGATATGATTGTAGTGcgtattaaaaataaatcaagtGCCACTAACTGAAAAGGAAGAGTTTCATTAGGGGAATTGTTTGTATACGAaatgattttcttttcttttgagCACAACGTACCACCATTAAATAGCACAATACCACCCAGTGACACAACACCCAATAATACAATGTGCTTTTAAATGGCCTGTCGAACATGCAACTTGTTACAGTCTTTTGGAAGGTGGAACAAACCATTGTTTCTTGGCTGGAGAAGATGTTTCTCAGTTAACTGCCATGTGAAAGACAAAAATACTGACAACCTAGCACCTAGTACTGTCTACCAGCATCTCATTGATACAGGAAGATTACGTGAAGATGAACATCAGAGGAAGGTTGTGGGCGACCTGGATGTGTTAGCTGATCACCTGAGAAAGTATGAACTGGCACAAAACCGTGGTTTCTTTGGAAAGGTCTTTGGAGGTGGTTCGAATGCAAAACCAAAAGGAAGATATTTGTACGGGTCTGTAGGTTGTGGGAAAACAATGCTGATGGATTTGCTTTATGACCATGTTGATATTTCCAAGAAGAAACGAGTTCATTTTAATGCCTTCATGTTAGATGTGCACAAACGTATCCATGCGTTCAAGCTGTCGGCCCCACCCACCGACCATCGCAATAGGAACGCCCTTCCTCTTGACCCCATTCAACCGGTTGCACAAGATATAAGAAGAGAAATCACTTTCCTTTGTTTTGATGAGTTTCAGGTAACCGACGTCGCTGATGCGCTCATACTCAAGCGACTTTTCACATGTTTGTTTGAGGCGGGAATCGTGGTGGTAGCGACGTCAAATCGACCACCATGTGACCTATACAAGAACGGATTACAAAGAAGGGACTTCCTTCCTTTTATACCCATACTAGAGaaaaattgcgaagttgttcATATATCGTCGAGAGTTGACTATCGTTGGCTTGATGTCAGCATGCTTGGAGGTTCGTCGCTAATATCTGGTGAACCGAGTACAGCCGGCAAACTGTCAGAGATATTTAATAGGTTTTGTGAGTACGAACGCAAATATGGATCTGAAATTGGTGAACAAACATTGACAGTGTTTGGTAGGAAGCTTGTCGTCAAGAGAACGTGTGGAAAGCTGGCGTGGTTCACATTCGAGGAATTATGCACAAAGCCTTTGGGAGCCGTAGATTACATTGCGATATCGGAAAGATTCGAAACGGTTCTCATCCAAGACATCCCAATAATGAGCATCCGGAggaagatggaaatgaggagATTTATAACACTCATTGATACTTTCTACGATAATAAGGTCCGTTTGATATGTTCTACCGAGAAGCCGTGGGACAAGATGATTGTATCTGCAAGTTTGAGTCAATCTGACATCGATGCTAAACGAATGCTAATTGATGATCTCGGAATCACTGAAAACACCGCTAGCCTGTTCACTGGTGAAGAGGAGCTTTTCGCGCTCGATCGAACTTTATCTCGTATAAACGAAATGCAAACAGAGCAATACTGGAAGCTGAGAGGAGAAACGACGTTGTAACTTTACCTGTATATTTATTAAAGCGGATTCGTCACAATATATTGCACTTACGTTTGTACTCTCTGCTTTCATCAGTTGTCATTTAATTGATTCGTTAATTATaagtctgaaatgtttttgtgtgAAGAGCTTTCGATTAATTTTATTCAAAGCGAGGGACATCTTTTCTTTGTGCGCGGGCGATTGAAATAAATGTTCCAACTTCCTTATACTCTCCTCAAGAAAAATCAAATCCTGTTTCTTATGATTAATGTAGTTGATTCGCGGCTCACTCTTTTTCGCCTTCAATGCCTTACCAAGTTCCATGTCTTTGTCTTTAAAGAAGCTTCGGGTC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3V384	AFG1-like ATPase OS=Mus musculus OX=10090 GN=Afg1l PE=1 SV=1
Q32PX9	AFG1-like ATPase OS=Rattus norvegicus OX=10116 GN=Afg1l PE=2 SV=1
Q8WV93	AFG1-like ATPase OS=Homo sapiens OX=9606 GN=AFG1L PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001828 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03969 all species →	AFG1_ATPase	AFG1-like ATPase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005654 all species →	Family	ATPase, AFG1-like	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12169 all species →	ATPASE N2B	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18798	AFG1, LACE1; peroxisome-assembly ATPase	EC:3.6.4.7	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.