Detailed information of ENSQNNP00000023502.1 in Candelabrum cocksii

Genomic Location: :...
NR annotation: XP_002158319.2, collagen alpha-1(I) chain-like [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P12105Collagen alpha-1(III) chain (Fragments) OS=Gallus gallus OX=9031 GN=COL3A1 PE=2 SV=2
P05997Collagen alpha-2(V) chain OS=Homo sapiens OX=9606 GN=COL5A2 PE=1 SV=3
Q8IZC6Collagen alpha-1(XXVII) chain OS=Homo sapiens OX=9606 GN=COL27A1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF01410COLFIFibrillar collagen C-terminal domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR000885DomainFibrillar collagen, C-terminalInterproscan
IPR050149FamilyCollagen superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24023COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005201Molecular Functionextracellular matrix structural constituentInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan

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