Gene detail

Detailed information of ENSQNNP00000024412.1 in Candelabrum cocksii

Genomic Location: not available for this species
NR annotation: XP_047137154.1, uncharacterized protein LOC100210754 isoform X3 [Hydra vulgaris]
Species Candelabrum cocksii · all data for this species · gene families

Sequence

CDS

Transcript

ENSQNNT00000025335

ATGATCAACGATTTGTATCTCCCTCTCATGATGGACTGCGAAAcgttaaaatataattttaaaagcatGCATCTTTTGTTCTCTAATGGTAGTACAAGCAGTCCTTTGCATAACGACGGGTATGAGAACTTTCTCTCCGTCTTTTCCGGTACAAAGGTCGTCTACAGTATTCACCCCAGATACATTAAACACTTGTACTTTACCACAGCTGCAAATTCTTTTCCTGGCGTTTCACCAGTGAATCCCGAAGGCATTGATTTGGTGAACTACCCCGGATTCGTCAGTGCACCTTTCCACAAAACGGTTTTACGAGCGGGAGATATGTTGTACATACCTCGGGGATGGTTCCATCAAGTGCGCTCGTACGATTCGCCGAACATTGGCGCCAGCTTGTGGTTTAATTTGTTCACAAGAAGTTATGCTCCCAATGTGGAAATTCCTGCCTTTACATTACGTGACGCCATAGGACAAGAAATGTACATCAACAAGTTAGTCGAGAATTCACCACCCACTATTCATTGCCGGTTGCAAAACGTGCCAATGCgcaattttcacaaaattgtttttccgATAACAAATGTTCCTCGAGGAGGCACATTAGGGCGCAACAGAGTTTTTCGGGTTAAAATGAAACCTCTTATTATCCTACATGAAGAGGTGCGCAAAGATGAGCCAACGATTTTTGTGGGTTCCGACGATAGCTATATCTATGCTGTTAGCTTACTCACAGGGAAAGTGAAGTGGAAAGTGAAGACGAAAAAAGATACTGGATCCACTTGTTCGTTTGGTGTTTCTCGACTTGTTGTCTACTGTGGAGCAGATGACGGCAACATGAGGGCACTTAATATTTCGAACGGATCTCTAATTTGGAAATTCCGAACGAAAAACTCTGTTATATCGTCGCCTCTTGTTGGCCCCGAAGGTCGAATTTATTTCGGTTCGTTGGACAGATATTTTTTCGCTTTGCGCAGCAATGGCAGTGTTTTTTggaaaacaaatttgaaagaCTTTGTTTGGAGTTCGCCTTGTTCAGCTGGCGAAACGATCTACATATCAACCATGTCTGATTACCATTATAACATCTTTGCTCTTAATATGAATACAGGAAAGAAGAGATGGAGGTACATTGCGTCTGGCGCCATTAAATCATCCCCTAAACTCAGTCACGACAATAGCACGGTGTTTTTTTGTGATATGAAGGGTTACGTGTATGCACTGAATGCTGTTACTGGTGAAGAGATCTTTAATCTGCGGCTAACTAATGAAACAGGTATAGAAGCGAGCCCTGCTATCTCACACACAGGTGTTCTTTACATTGTTACTAATCATGGTGATCTTATCGCTCTTGATACTGTGACGGAAACAGTGCGTTGGAAGATGCACATCGGAAATTCAACGACACGCGGTTGCACCTCCAGTCCGTACTTGGGGCCAAACGGTGTACTCTATGTTGGAGCTGGCAACGGTACGTTACTGGCGTTGAATCCTGATGATCAATCGGTTATATGGACAGTAAATATGAAATCAGAAATCTTCTACAGTTCTCCTCGTTCGGGTGAGAATCTTGTTGTGATTGGCACCATAGATGGAAGTCTGCATGCGTTAGATGCCAAGACTGGACAGCATGCTTGGAGAATTAAAACGGGGAATGCTATTGCTGGGACCCCTCTTATTTTATGAGACATTGTAAATCTCAAACCAGAACGAGACTTATTGAGTtggatatttgaaaattcaagTTCTGTTACCTTTAATTCATTCTCCACTAAAACCTTTATTTTGCACAAACCAATCTTCCTGtaataaaagaattttttgttatttttctttatcgttttggtatataatataattttttatagtTGAATATtagtttatttgtaatttatttacggtttttaaggtttgtttaaaatttttaacggTAACGATTCACTTcgatttttatgtaattttttttttgaactACGTACATATTTATTAGTCAATTTTgctttgatatattttttttatttttaatctgtGGTATCTATgtagcaatatatatatttattttatttaatgaatattttttcaggaTATAATTTACACttcaacttaaaataaaattgctttcaACGTGTGTCCtgagttaaaaattacaagttagtagtaaaaattaatatgtatctatatatgaatatatatGCGAAGTATGCGAACTTGTTGGTTGCCTCTTACTTTCGAGTATACCGGCAAAATACAGAAAGAAGAATATTGGGTTGTACCGGGATGACGGTCTTGCAGTCTTCAAAAACATCTCTGGTCCACAgagtgaaaaaattaaaaaggaatTTCAAAAGCTGTTTAAAGAGAATGACTTGGAGATAGTGGTTGAATGCAATATGACGGTA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q54FG7	JmjC domain-containing protein F OS=Dictyostelium discoideum OX=44689 GN=jcdF PE=4 SV=1
F4K2M8	Lysine-specific demethylase JMJ31 OS=Arabidopsis thaliana OX=3702 GN=JMJ31 PE=2 SV=1
A2RSX7	tRNA wybutosine-synthesizing protein 5 OS=Mus musculus OX=10090 GN=Tyw5 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001351 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01011 all species →	PQQ	PQQ enzyme repeat	Repeat	Interproscan
PF13621 all species →	Cupin_8	Cupin-like domain	Domain	Interproscan
PF13360 all species →	PQQ_2	PQQ-like domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003347 all species →	Domain	JmjC domain	Interproscan
IPR002372 all species →	Repeat	Pyrrolo-quinoline quinone repeat	Interproscan
IPR041667 all species →	Domain	Cupin-like domain 8	Interproscan
IPR011047 all species →	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR018391 all species →	Repeat	Pyrrolo-quinoline quinone beta-propeller repeat	Interproscan
IPR014710 all species →	Homologous_superfamily	RmlC-like jelly roll fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR34512 all species →	CELL SURFACE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQNNP00000024412.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.