Gene detail

Detailed information of ENSQNNP00000024764.1 in Candelabrum cocksii

Genomic Location: not available for this species
NR annotation: XP_002165011.3, unnamed protein product [Hydra vulgaris]
Species abbreviation CCOCK · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P81377	cAMP-dependent protein kinase type I-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1b PE=2 SV=2
P12849	cAMP-dependent protein kinase type I-beta regulatory subunit OS=Mus musculus OX=10090 GN=Prkar1b PE=1 SV=2
P10644	cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Homo sapiens OX=9606 GN=PRKAR1A PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005610 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08292 all species →	RNA_pol_Rbc25	RNA polymerase III subunit Rpc25	Domain	Interproscan
PF00027 all species →	cNMP_binding	Cyclic nucleotide-binding domain	Domain	Interproscan
PF02197 all species →	RIIa	Regulatory subunit of type II PKA R-subunit	Domain	Interproscan
PF03876 all species →	SHS2_Rpb7-N	SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003117 all species →	Domain	cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain	Interproscan
IPR018488 all species →	Conserved_site	Cyclic nucleotide-binding, conserved site	Interproscan
IPR018490 all species →	Homologous_superfamily	Cyclic nucleotide-binding domain superfamily	Interproscan
IPR000595 all species →	Domain	Cyclic nucleotide-binding domain	Interproscan
IPR050503 all species →	Family	cAMP-dependent kinase regulatory chain	Interproscan
IPR013238 all species →	Domain	RNA polymerase III, subunit Rpc25	Interproscan
IPR036898 all species →	Homologous_superfamily	RNA polymerase Rpb7-like, N-terminal domain superfamily	Interproscan
IPR012340 all species →	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR014710 all species →	Homologous_superfamily	RmlC-like jelly roll fold	Interproscan
IPR005576 all species →	Domain	RNA polymerase Rpb7-like , N-terminal	Interproscan
IPR004519 all species →	Family	DNA-directed RNA polymerase, subunit E/RPC8	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11635 all species →	CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006351 all species →	Biological Process	DNA-templated transcription	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0003899 all species →	Molecular Function	DNA-directed 5'-3' RNA polymerase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04739	PRKAR; cAMP-dependent protein kinase regulator	-	Insulin signaling pathway	ko04910	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.