Gene detail

Detailed information of ENSQNNP00000024766.1 in Candelabrum cocksii

Genomic Location: not available for this species
NR annotation: XP_012559008.1, tuftelin-interacting protein 11 isoform X1 [Hydra vulgaris]
Species Candelabrum cocksii · all data for this species · gene families

Sequence

CDS

ENSQNNT00000025708

ATGGCATCAGATGAAGAGTATGAGAGTTTTAAGATTACTGACTTTGATTTGGAATGTGAATTAAATCCATCAGCGAGAAGACACAAGCAAACCAAGGAACAAGCAATTTATGGTGTGTGGGCAAATTCTGATGATGAAATTGAAGGACACATGCAACGTAACACCAGGAAAAAAAGAGGGCGTGTTGACTACGTTGAACCAATGGGTTTTGTGAGCGGGGGAGTGTTTGGGGACAAAGACGAAGAAAAAGATGCAAAGAAAGAAGTAAAGTTTGAAGCTTCTATTAATAAAGACGCATGTAAAAGACAACAGAAAAACTCAAAACAGTTTGGTGCATGGGAGAAGTATACAACAGGTTTTGGCAGCAAGATGCTGGAACGCATGGGTTATCAAGGCAAAGGTCTTGGAAAGCGGGGAGAAGGCATCACTGAACCTGTTAAAGCTTTCAAAAGGAATGGAAGAGCAGCTCTCGGTGCTTATGGTTCAGAAAATCCAGTCGTTGAAAGTGAACTTGCTTATAACACAGATGAAGAGGAAGAAATCAAGATCAGGAGTGAAATCGAAAACCTTCAACAATGGAAAAAGACTAGACAGGAAGTAAAGAAACCAAAATATATGTACAAAACTGCAGAGGAAGTCAAGCAAAACAGCTCTTCAATACAATTAGCTCCTCTTCTCTCGTCCTATGGAAATGTCAAGGTAGTGGATATGACAGGTCCTGATACTCGCGTACTGCAGGGTTATGGTTCCATAGGTCACCAGCACGCCAAACCGGGAGAAGGGGAGAAAACAGgAGTTACTGACAGCGGAAAGCCTTTCGATATTCCAGAGCTTGTTTATAATCTGAATCTTCTTGTGGACTTAGCGGAATCCGAGATATTGAAAATTGATCGGCAATTGCAATTTGAAAATGACAATGTAGTGAACATGTCTCATGAAAAAGGACGTCTTGAGAAAGTTCTGAAGGAAGAAGAAATTGAAGTTGAAAACTTAGAATTTGTAACTAAAGTTGTTGAGAGATGCAAAATTGGTATGCAACCTGATGAAGATGAGCCATTAACACTTGAAAGTCTcatcaaatgttttcaaaagttgCAAGATAATAGTTACGAAGAATACAAGCTCTACCATTTGGATGAGCTAGTTGTACCACTTGGTTTCCCTTTGCTTTTGCGTCATTTTGAATCATGGCAGCCATTTCTAAATGCTACACATGGACTTGAGGAAATAACATTATGGAAAAGGATTCTAAAAGAAGACGAGAACGGTTTGAACTTCAgtaaaaaggaagaaaatagAAGCATGAAGCCATTTGAAAGAATAATCTGGGAAGTGTGGATGCCCCATATCCGAACTGCTACTGGGACTTGGCAAGCAAGAAATCCTGATCCTTTGATTAATGTGCTGGAGACATGGATGAATATTATCCCTGATTGGGTTAGGGATAATATATTGGAGCAGCTTGTCATGCCTAAATTACTGGCGGCTGTCGATTTCTGGAATCCACTTATTGATCATGTGCCAATTCACTCTTGGATACACCCTTGGTTACCACTCATGGGGGAACATCTAGAACCTTTATACGGTCCTATACGCCACAAGCTGGCCATGGCATTGACTAATTGGCATCCTTCGGATCCCTCTGTGAAAGCTATTCTTGAACCGTGGGTTAAAGTGTTTTCCCGCGGGGCACTCGAGGCTTTCTTGCTTCGGTCGATCTACCCGAAACTTGAACAATGTATGAGTGATTTCAAAATCAACCCGCACCAACAAATGCTAGAACCGTTTCATTGGGTGATGTCATGGCAGCACATTTTGAGTCTACATCACATGGTCAGCATCTTTGACAAGCATTTGTTTCCAAAATGGCTGCAAGTATTACGGCATTGGCTTAATAATTCACCAAATTTCGATGAAGTTACAAAATGGTATTTGGGTTGGAAGACGATGTTTGGGtcgaaattgttttcaaatccTTCAGTCAAAGAAAATTTCAACAGAGCTCTAACGTTAATGAACGAAGCTGTGAATGGTACAATGCAACCCGGAGCCAAGGAGAACGTAGCTTATTTGACCAGCACAGAAAGAAGACTTGAAACGCGAAATATATCGTACCGAACAGAAAAGCTTGTTTGCAAAGCGTCACCTTCCATACCGGCTCGATTTAAAGATATTGTGGAAAAAACTGCGGAAGACAACGATATATTGTTTATTCCCATTCCCAACCGCAAACACGAGGGCAAAGCTGTGTATTCGTTCGGTAAAAGCGTCATCTACATCGATCGTGAGGTGGTTTTCAGGTTCGTGCAGGGTACGTGGAAACCCTCATCATTGCAAGATTTGCTCGATTGCTCCAGATAG

Transcript

ENSQNNT00000025708

CAAGAATTTagtttttatcaatatttactgctatttttgaataataaaaagatCTAAAAAAGGAAGGAAATGGCATCAGATGAAGAGTATGAGAGTTTTAAGATTACTGACTTTGATTTGGAATGTGAATTAAATCCATCAGCGAGAAGACACAAGCAAACCAAGGAACAAGCAATTTATGGTGTGTGGGCAAATTCTGATGATGAAATTGAAGGACACATGCAACGTAACACCAGGAAAAAAAGAGGGCGTGTTGACTACGTTGAACCAATGGGTTTTGTGAGCGGGGGAGTGTTTGGGGACAAAGACGAAGAAAAAGATGCAAAGAAAGAAGTAAAGTTTGAAGCTTCTATTAATAAAGACGCATGTAAAAGACAACAGAAAAACTCAAAACAGTTTGGTGCATGGGAGAAGTATACAACAGGTTTTGGCAGCAAGATGCTGGAACGCATGGGTTATCAAGGCAAAGGTCTTGGAAAGCGGGGAGAAGGCATCACTGAACCTGTTAAAGCTTTCAAAAGGAATGGAAGAGCAGCTCTCGGTGCTTATGGTTCAGAAAATCCAGTCGTTGAAAGTGAACTTGCTTATAACACAGATGAAGAGGAAGAAATCAAGATCAGGAGTGAAATCGAAAACCTTCAACAATGGAAAAAGACTAGACAGGAAGTAAAGAAACCAAAATATATGTACAAAACTGCAGAGGAAGTCAAGCAAAACAGCTCTTCAATACAATTAGCTCCTCTTCTCTCGTCCTATGGAAATGTCAAGGTAGTGGATATGACAGGTCCTGATACTCGCGTACTGCAGGGTTATGGTTCCATAGGTCACCAGCACGCCAAACCGGGAGAAGGGGAGAAAACAGgAGTTACTGACAGCGGAAAGCCTTTCGATATTCCAGAGCTTGTTTATAATCTGAATCTTCTTGTGGACTTAGCGGAATCCGAGATATTGAAAATTGATCGGCAATTGCAATTTGAAAATGACAATGTAGTGAACATGTCTCATGAAAAAGGACGTCTTGAGAAAGTTCTGAAGGAAGAAGAAATTGAAGTTGAAAACTTAGAATTTGTAACTAAAGTTGTTGAGAGATGCAAAATTGGTATGCAACCTGATGAAGATGAGCCATTAACACTTGAAAGTCTcatcaaatgttttcaaaagttgCAAGATAATAGTTACGAAGAATACAAGCTCTACCATTTGGATGAGCTAGTTGTACCACTTGGTTTCCCTTTGCTTTTGCGTCATTTTGAATCATGGCAGCCATTTCTAAATGCTACACATGGACTTGAGGAAATAACATTATGGAAAAGGATTCTAAAAGAAGACGAGAACGGTTTGAACTTCAgtaaaaaggaagaaaatagAAGCATGAAGCCATTTGAAAGAATAATCTGGGAAGTGTGGATGCCCCATATCCGAACTGCTACTGGGACTTGGCAAGCAAGAAATCCTGATCCTTTGATTAATGTGCTGGAGACATGGATGAATATTATCCCTGATTGGGTTAGGGATAATATATTGGAGCAGCTTGTCATGCCTAAATTACTGGCGGCTGTCGATTTCTGGAATCCACTTATTGATCATGTGCCAATTCACTCTTGGATACACCCTTGGTTACCACTCATGGGGGAACATCTAGAACCTTTATACGGTCCTATACGCCACAAGCTGGCCATGGCATTGACTAATTGGCATCCTTCGGATCCCTCTGTGAAAGCTATTCTTGAACCGTGGGTTAAAGTGTTTTCCCGCGGGGCACTCGAGGCTTTCTTGCTTCGGTCGATCTACCCGAAACTTGAACAATGTATGAGTGATTTCAAAATCAACCCGCACCAACAAATGCTAGAACCGTTTCATTGGGTGATGTCATGGCAGCACATTTTGAGTCTACATCACATGGTCAGCATCTTTGACAAGCATTTGTTTCCAAAATGGCTGCAAGTATTACGGCATTGGCTTAATAATTCACCAAATTTCGATGAAGTTACAAAATGGTATTTGGGTTGGAAGACGATGTTTGGGtcgaaattgttttcaaatccTTCAGTCAAAGAAAATTTCAACAGAGCTCTAACGTTAATGAACGAAGCTGTGAATGGTACAATGCAACCCGGAGCCAAGGAGAACGTAGCTTATTTGACCAGCACAGAAAGAAGACTTGAAACGCGAAATATATCGTACCGAACAGAAAAGCTTGTTTGCAAAGCGTCACCTTCCATACCGGCTCGATTTAAAGATATTGTGGAAAAAACTGCGGAAGACAACGATATATTGTTTATTCCCATTCCCAACCGCAAACACGAGGGCAAAGCTGTGTATTCGTTCGGTAAAAGCGTCATCTACATCGATCGTGAGGTGGTTTTCAGGTTCGTGCAGGGTACGTGGAAACCCTCATCATTGCAAGATTTGCTCGATTGCTCCAGATAGTGTGCTATCATTTCAAATGGCTGTTAACCGTTATCGACATCTTTTGGGCAAATTGATATAACAAAAGCATGCAAATTAGTAATAAGATCCtttataaaacttttcaaTTCAACTCAATGAAGGTTTTGTTGTTGAcagcataaaaatattttccataaaacCACGTGAAGTGTAGCAGCCGGTCATGATTCTCTCATATCATTTCTTGACTGTGTGTACCTCAATTTCATGCTATCTTCTATAACCATAGCAATCAAATCCAAGGTagaatgttttcttcttgCTTCAGTACCCAAAGTCTCTGCTACCGCCTTGATATGGTCTAATTTCTCGCTAACGTTATCCCTGTCGACTGCATTAATTGAGAAATGCAACATATCAGACAGATCTTTAATTTCTATAATAACATCCTCGATGTCTTGAATAATCGTTACCACACTAATGACAATCTTTAATAACGACGCAAGGATATCTTTCATATCACTAATAATTTGACGGGCGTCTTGTCCTACGCTGTACAGTATACCCATGATAGATACGCCCTGTGAGTCTGAAAATTCAGGAAACCTTTTTAGTTTTGCACATGAACGTCTTCAGCATAATTTATTGAAAGCTCCCATGAGCATCCGTTAGCGTGCAAGATTTATGTGCTGAATGTGAGAGATTAGATCTTAAATTCATTCGGCCCAAATGGCAAGGGACTTTAGAGTCCACCCTGGATTATAGTTTAGCAAGTTTATCTGAAACTAGAATGCTTTTAGGGTTGTTATTATCGAACAATCGTTAATTGTCCAAGAATTTGTTTGCCACGTGTATTTTTGAATTGTCGGGTGCAATTGTGTTTAatgtaacaaattttaagaaatttttgtactttcaaaaagaaatggaGCAACATCTTCATCGCCTATCAAAGCTCCTGAAACATTCTTGTAATCTTAAAAGACATGTAAAGATACAAAGTTTCAGTAAACCGATGTTTCCAGAGATTTGGGTCTG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9UBB9	Tuftelin-interacting protein 11 OS=Homo sapiens OX=9606 GN=TFIP11 PE=1 SV=1
A1XD93	Tuftelin-interacting protein 11 OS=Pan troglodytes OX=9598 GN=TFIP11 PE=2 SV=1
A1XD94	Tuftelin-interacting protein 11 OS=Macaca mulatta OX=9544 GN=TFIP11 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004065 (this species only)
Transcription factor family	GCFC · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12457 all species →	TIP_N	Tuftelin interacting protein N terminal	Family	Interproscan
PF01585 all species →	G-patch	G-patch domain	Family	Interproscan
PF07842 all species →	GCFC	GC-rich sequence DNA-binding factor-like protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045211 all species →	Family	TFP11/STIP/Ntr1	Interproscan
IPR022159 all species →	Domain	Tuftelin interacting protein, N-terminal domain	Interproscan
IPR000467 all species →	Domain	G-patch domain	Interproscan
IPR022783 all species →	Domain	GCF, C-terminal	Interproscan
IPR024933 all species →	Family	Septin and tuftelin interacting protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23329 all species →	TUFTELIN-INTERACTING PROTEIN 11-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000390 all species →	Biological Process	spliceosomal complex disassembly	Interproscan
GO:0071008 all species →	Cellular Component	U2-type post-mRNA release spliceosomal complex	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13103	TFIP11; tuftelin-interacting protein 11	-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.