Gene detail

Detailed information of ENSQNNP00000024971.1 in Candelabrum cocksii

Genomic Location: not available for this species
NR annotation: XP_047143476.1, cytoplasmic tRNA 2-thiolation protein 2 [Hydra vulgaris]
Species Candelabrum cocksii · all data for this species · gene families

Sequence

CDS

Transcript

ENSQNNT00000025928

GTGAAACGACTTTGTAGGCGCAAATGAGTGTAcaccaggacctaaaccttgagataagaagagccactgttacatgtggagagtcccgtaaaactccattattgttattattaacaCAAATTCAAAAGGAATATAACAATATTCAAACAACGGATAACGATGTTCATGTTTTTTCAAGATAACGTTCTGAAACCATCTGTTATTCACCATAGACCAATAGACACCATTACTCAAAATATCAATAACAAATTTACTGTTATTTTATTGACTTTCTTAAAAAGTTGCGAACAAAAAGTACAATGTGTGATGTGAACCCAGAGAAACTATCCGCAGAAGAAGTTATGGTCTCGCGAAGGAACGACTTATCAAACAGTGTGTGTATGAAGTGTAAAGAGGTGAAAGCTGTTGTCATTGTTCGTGGACAGGATCCTTTATGTAGGACGTGTTTTTTAACGTATACCACGCACAAGTTTCGCTCGACTCTCGGAAAGTCTAAACTCATCAAAGCTGATGACAAGGTCTTATTAGCACTGTCCAGTGGCCAGTCATCAACAGCCATGCTTCATCTTGTTAAACAGGCCCTCAGTGAAGGTGCACACAAACGATTGAAGTTCTCTCCTGCGTTGGTGTTTGTGAATGAGCACGTAACAATTGGTGATGAATTTCGTTACGATACACTGCATGTGGAAGATCTTGCTAGACATTTTGGTTATCCTTTGTTTTGTGAACCCGTACATAAGGGCTTCTGCTTGTTGGCTGATGGCGATAACGACGAAAGCAAATTTGTGAGAACCTTGAACACGATAACATCTCTGACATCGAAAGTTCAGTTTATTGAACACTCAAGACTTTCTGTGATTTGTGGCATAGCGAGACAACATGGATATACAAAGATTTTGATGGGAGACAATGCCACCCACCTGGCCATGAAAATCTTAACGAACATGGCTGAGGGGAATGGAGCTACCATTCCATTGGTCGTTGGCGTGGCTGACACACGCTACCATGGGTTGACTATTATACGTCCAATGAGAGAGTTAACGAATAAAGAAGTTGCGCTCTACAATCGCTTACAAGACGTCTCCGTTCATCCACTACCAAACATACTCACAAAGAAGCCTGAGGGTTCCTGCATTCAGCGAAAAACAGAAGAATTCATAAACAACCTACAGAATGGTTTTCCTTCAACAGTCGCTACAGTCTTCAGAACTGGTGATAAACTTTGCGTACATTCTCAAGCCAGCAGTGCTTCTTGTGTTTTGTGTCAGCGAACTTTAGATGGAAGTGAACAGAGCTACAAAGCCACCAATGATATGAGCTCACTCAATCACGAGTCAACCACGTGCTCAAGTTGCGATTGCGGAATTTCATTGGATAGCAGGCAATCGACCAGCGAAGTTCAGTCAAATTTATGTTACGCTGGCGGTGGCGAGTTACTGTCCCAGGAAGGTACTACGCAAGAGACTGCACAATATCATACCCGACGCCCGTCAAGCCTGGCTCGCAGACGACGCCGCAGCGGGAGGGAAAATCGCAAACCTTAAGAGCTGGTTCGATATTCTTGTCCATGAAGGAAAAAAGTTTGGGTATTACGTTAATGGCGGTAAAAGCTGGcttatacttaaaaatgaaatgcagTTGATGCACGCAGATGAGATATTTGGAGAAGAGGTAAACACGACAACAGATGGTAAGAGGCATTTAGGTGCTGTGATTGGAAGCCAAGTCTATAAAAACGAGTATTGTAACGAAAAAGTATCAAAATGGACAAGCGAATTAAAAACCCTCTCTGAAATCTCGAAATCCGAACCACAGGCGGCATATGTCGCGTTTATTAAGAGCTTCAAGTCAAAATTTACTTACTTTACAAGAACGATTCCTTCATTTGAAGACTATGTTGAGCCGATTCAGGAAATAATAAACGATTGTCTCCTGCCAAATCTTTTCGACCAGCAAGAAAAGTTTTCGACAGAAAtgctaaaattattttctct

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6DC53	Cytoplasmic tRNA 2-thiolation protein 2 OS=Danio rerio OX=7955 GN=ctu2 PE=2 SV=2
Q17JB7	Cytoplasmic tRNA 2-thiolation protein 2 OS=Aedes aegypti OX=7159 GN=AAEL002056 PE=3 SV=1
A0NEF7	Cytoplasmic tRNA 2-thiolation protein 2 OS=Anopheles gambiae OX=7165 GN=AGAP005651 PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007424 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10288 all species →	CTU2	Cytoplasmic tRNA 2-thiolation protein 2	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019407 all species →	Family	Cytoplasmic tRNA 2-thiolation protein 2	Interproscan
IPR014729 all species →	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20882 all species →	CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000049 all species →	Molecular Function	tRNA binding	Interproscan
GO:0002098 all species →	Biological Process	tRNA wobble uridine modification	Interproscan
GO:0034227 all species →	Biological Process	tRNA thio-modification	Interproscan
GO:0002143 all species →	Biological Process	tRNA wobble position uridine thiolation	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0016783 all species →	Molecular Function	sulfurtransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQNNP00000024971.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.