Gene detail

Detailed information of ENSQNNP00000025656.1 in Candelabrum cocksii

Genomic Location: :...
NR annotation: XP_047143311.1, small G protein signaling modulator 3 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSQNNT00000026652

atgaaaatttgtgCAAGCAAGTTCCATATATCaccattttattttgacacatTGTTTGATTATCCAGCTCCCATGGTTGCTGGTGATAGCTCAGATGATGGCTCTGATGAAGAAGACAATGGTACAATGTGGGGCCATCCCAACTACGGCGTGATTGTAGGCAGCGAACTTGGAGCTAATGTTCCTTCATCTCCCACTACTGCACCTGCCCAACACATGCCTGTTCTTGGTGGACCGTTTTCTGCCTTGTTGCAAAGTATGTGGCCACAAGATATCTTAGGACAAATTCAACAGACTGAAGATTCTGGAATGCATCCTGAATGTGAATATGATGAATTTGGGTTTCGACTTAATCAAAACAAAGAAGACCCTGATCCTTGTTCATATGGTGCATCCGAAGACCCTTCAGTCCGTTTACGATGGACAGCTTTTGTTGAATCTACGCAGAAAGGAATTATTGGCGATTTGACTTGGGATAAGGTATCTCTGAGTTTGGAGAAATCAGAAAAACTCAAGGAACTTGTCTACTCTGGCATACCTCACAGTATGAGGGTGCATgTGTGGCCACGACTCAGTGGAGCTTATCATAAAAAGTCTGAAGCAGAGATGTCTTACAAGCTTTTATCTGCTGTTTCTCGACAGGATTTGTGTCGAACAATGCCAGCAAATGCTTGCTTTTGCAATGATGACAGTATTGGTGTGCCTAAACTAAAACGTGTGCTGCTCTCGTTGGCTTGGTTTTTCCCTGATATTGGATACTGCCAGGGAATGGGAATGATTGCATCTTCCTtgcttttgtttcttgaagaAGAAGATGTCTTTTGGATGATGGTATCCATCATTGAAGAGTTACTCCCTACATCTTATTACTCGTCAACTTTAATCGGAGTGCAGGTGGACCAGCGTGTTTTGCGGCAGTTAATTGCGAGCTACATACCTCGTGTTGATGACTTGATGAATGAGAATGATATTgAACTTGGCTTGATAACACTGCATTGGTTTCTTACAGCAATGGCTGGTGTGCTGAACCTGAAAATGTTGCTACGAATATGggatttgtttttctatgaaggATCAATTATACTGTTTAAGGTCACTCTTGGAATGATCAAATACAAGGAAAAGGAGTTGTTGTCAATGGAAAATTCAGCTCAAATTTTCAATATCCTCTCCAATCTTCCATCGGAGATGGTTGACATTAATATGCTGCTTGTACACACAAACAAAGCTGCTGCTTCGCTCACTCCTGTTATCCTTCAAGCACATCGTAATAAACACTTTGCTTTTCTGGAGGCAGAGCTGAATAAACGAGAAGATAGTGTCAACAACAATGTCAAACAGGAGATTCAACGGAGAACAAGTGTACCACAAAGAAAGACTTGGATTAGCATGGCTTATGATATCAGCACTGCCGTTTACAAAAATAGCCTCATATGCGGCTCACCCAGAAAACCCGCTCTAACGATGAAAGCCAAGAATGTCATTCAAACAGAAATAATAAGCAACCTGCGTGAGGCAGTCTTTCAGATAGCCAGGCATTTTGATTACAAAGGGACAAAAGCTGAGCTACTTCCAGACTACACAAGGAACATCACTTTGCAAGACTATCAGAATGTTAACATAGAAAGAATCAAGCAGCGACGAGCAAAAGCACTCATTGATTTCGAAAGACACGAAGATGATGAACTTGGTTTTCGAAAAAATGATCTCATTATGATAATTTCTCAAAAAGATGAACATTGTTGGATAGGCGAGTTAAACGGATTGCGAGGATGGTTCCCTGCCAAGTTTGTTGAAGTACTTGATGAACGAAGCAAAGAGTATTCATCTGCTGGAGATGACAGGGTAACAGGAGCCGTCACTGATCTTGTACGAGGAAAACTTTACAACTCACTTAGACGAGTTTTAGCCCATGGTTTGAAGTCTCTCTCCTTCTCTGGTTACACTCACCCTTGGTTGTATATACAAGAGGCGAGTAAAAAGGAAGTGCAAAACGATTTCAAGTCCGTTTATTCAAGACTTGTTCTTTGCAAAACATTCAAATTGGATGAAGATGGGAAGATTCTATCTCCAGATGAACTTCTTTACAGGGCAGTACAAAGAATCAACAGCAAATATGATGACGTTCGAGCTGGTAATGACGCAAAACTGCGCACCCTCATATGCCATGGATTGAAcgAACAAGTGCTTCATCTATGGTTCGAGTTACTTTGCTGCATGAAGGAGTTAACTGAGAAATGGTATGACCCGCATTCTTATGTCAGAAGTCCGGGTTGGGTCCAGATTAAATACGAACTAACGGTGTTGTCGAAGTTTTCCTTCAATCTGTCATTGGACCATGAAATCAAGGAAAAGGAAGAGAGTGCGTCAAGCATGAAGGAAGATGTTCAAGATATGCTCGTGAAACATCACTTATTCAGCTGGCATCTCTGA

Transcript

ENSQNNT00000026652

Protein

Uniprot

Uniprot term	Description
Q8VCZ6	Small G protein signaling modulator 3 OS=Mus musculus OX=10090 GN=Sgsm3 PE=1 SV=1
Q6P6R7	Small G protein signaling modulator 3 OS=Rattus norvegicus OX=10116 GN=Sgsm3 PE=1 SV=1
Q2KI13	Small G protein signaling modulator 3 OS=Bos taurus OX=9913 GN=SGSM3 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00018	SH3_1	SH3 domain	Domain	Interproscan
PF02759	RUN	RUN domain	Family	Interproscan
PF00566	RabGAP-TBC	Rab-GTPase-TBC domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001452	Domain	SH3 domain	Interproscan
IPR035969	Homologous_superfamily	Rab-GAP-TBC domain superfamily	Interproscan
IPR004012	Domain	RUN domain	Interproscan
IPR037213	Homologous_superfamily	RUN domain superfamily	Interproscan
IPR000195	Domain	Rab-GAP-TBC domain	Interproscan
IPR035833	Domain	SGSM3, SH3 domain	Interproscan
IPR050302	Family	Rab GTPase-activating TBC domain-containing protein	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47219	RAB GTPASE-ACTIVATING PROTEIN 1-LIKE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20176	SGSM3, MAP; small G protein signaling modulator 3	-	Membrane trafficking	ko04131	deepkoala