Gene detail

Detailed information of ENSQNNP00000025693.1 in Candelabrum cocksii

Genomic Location: :...
NR annotation: XP_047136397.1, uncharacterized protein LOC105846586 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSQNNT00000026690

CATAAAGACCACCCGATTGATGGCGAAAACGAAGtttgtttgaaatttttagctacgtttctttttcttttagttcATCTCTACCCTGAAAGTGGTTTGCATGTTAATCTTGTGAGAGAACAAAGCATACTTGCAAATAAATGGACTGTAGTTCGTGGATGGGCCAAAGTTGACAGTGTCAAAGGCCTTTTTCTAGAAGATCTTGTTATAAGACAAGAATCAAAATTTATTCCATCGAGGTCTGGTATATACTATGCAACTCTACatttacatttcaaaaaacaagTAAAGAACTTGAGATACATTACAAACACTTCTATGACAATTGGTCAAACTAGCACATCTGTTATATCGAAGGGTGGTTCTGGTAAAGTCGTGAAAAACATCCAAAGTAGTGATATGCTCTTAGTCAACGTTAATGCAAGTTTTGAAATCCTTCTCCATGTGTCTGTTGATGCTGTTCTCACACAATATTCAAGTTTTGCTATTCAGTTTGTAAGCTCTTATGTGCATGCATTAGGATTTATAGCTAATCCAACAAAACAGACAGAGTTGCATGGAAATGCTTTTAAGCAGTACATCCTTGATTGGTCTCCCaagtttgaaataattaatgcTTTATCGAAGTCAACTGCAAACTTTATTATACCTATTGGAGGATTTTATATCATTGTCATAAAACTTATCCTGGAAAACACCCAAGGCAATGTCTCTCTATACCTGACAGATTCATATAACTTTGAGGATTGTGTACATCAGTCATACTTCCATAAGATGGCAAGTTCTGTCACCATTTCCTTCGCTGTCATACGAATTTATAAAGTAAAGAATAAAGTTTCTCTACTTATACTTGcagaaaataattgttttgtttcaaaatccTCAGagtattcaatattttttctggaaAGTGCACCATCAAATGATTATTCTCAACATGCTTATCATTTAGGCTCAGATGAATATATTCAGTCTAGTGAAgaattcaaagaaattttgaactGGAAAACTGGTCCTGACCAGACATTCTTTCAAGGTGCTTTTCAGATATTTTCTTCTGGTTACTATTTCGTTGGCTTGAAGCTTATTATTGAAACAGAGGGAAGAAATTATATCCGTGTTTCCATACTCATTGATCAAGATGATgtaattcaaaattttttagATGTAACAAATGAGCACAATGTTATTTCCATgaataacattttatttattcgaCAGAAAGAAAGTTTAGTGTGTCAACTCCAAAGCTTACAGAatgtcaaaattttaaaattgagCTCCTTTACAATATACAAGGTGCCGTTTCAAATATATTCTTCCCTATACATAAACAAAGTTGAAGCAATTGAAACACAAATGACTGGTGGTACATATATGTTGTTGAAAAATGCTTTGGAAAAAATGGATGCAAATGCAAACTTGAGTCTAGATGGTACAAAATTGATTATTTCTGAAGATGGTGTGTATTACATTATTGTGAATTATTATGTTGAAATGGCTTCCCATAGTGTGGTAAACATGAGCTTGATTGTGAACAAAACCAGTGGAAAATCGCACATTATATCAACGTGCTACGAAAACAATTTGTCTTCCTGTTTCCTCTCaactgttttgtttctcgaggCGGGTGATGCACTTTCTGTTTGGCAAGACTGTTCAGAACCTTCATGTTCTAATCAGAAGCATAGTATATCTATAGAACTTGGTATTTATCTTATTGCAATAAATTTAATGCTTGAATTTGCAGATGTTTTAGAGTTGGTTGATATCATTATGACTGTTCAGCTTAACAGTACTGTTGCAAAACCAAGACTTTTTCATGGCTATAAAGAAATGCAAAAGACGAAAGGTGTGAGCATATCTTTTGTAAAGACATATTTCATGAACCTTGGTGATTGGATCACTGTAAGATTAAACCATTTGGGTAAAGACATAAGTGATGTTCTTATACAAGAGTCTTGCTCCATCTCAGTTTTTCTGCTTACAAGAGACCGTTTGAGAGATTATCTTGTGGAAGGCACAGAATACTCACAGACAAGCGGAGGAAGTATTTTCACCAGTAGTCCAACTGTTGGAAGAAGGAGTGTGTATTTGAATTTTGTCTACGACTTTTTAGCCAGGAAAACATTTGTGGCACTTTTAACGGTGACTCTGTATGGGGAATTAACATTTGGCAACAAAAAGCCACAATATATGGAAGTATACCTAACATTAAAGGGAACGAAATCATGGCCACATTTGTTGGCAAGGAAAACGCACATGGAATCTACTCCGCAAATAACTCTCCAGTTTTCTGGCGTGCTTATTTTGCAGCCTAACGAATTGATCCAAGTGTATATcaatatatcatcatcattggtATTTAAAACATTGAAAGGCACTTCCGTCTCATTTGCAGTTCTGGAGGGTGGTtcagaagaaattgaaaacagCAATTTTTTTGAGTCAAGCgatattttgtttaatgatCATTTTCCTGAAGGAGTGTTTACAGACATGCTAATTCCAAAATTGAATGCAGATATGCCTGTGTTCTTCGTGCAACCATCTCCTCGATACGTGAATACCCCTGGAAGAAGAAGCTTCACATGTGAAGCTAGTCAAGGAAAGAAAGGCATCAGTTACCATTGGAATAAATTCAGTGGCAACTACTCTCTGAATATATCAAGCAACAATTACATTGAGTTGAGCGGTACACCACAAGAGTCAGGACACTACTTCTGTTCTGCGTATTATAATGGCTATGAGGTTGATTCCAACATTGCAACGTTtaatttaaaagACAAAGACGAGTGCATGTTGATGTTGATTGATAGGAACTTCTCCCAACCTTGTCATAAATATTCCACGTGTACTAACACCATTGGTTCATATGCTTGCTTCTGTAACAATGGTTTCCTTGGTGATGGCATTAGCTGCACTGACATCAATGAATGTGATGGTGAAAACATTTGTGGGCAAAATTCCACTTGTACCAACTTACAGGGTTCATTTAATTGTTCGTGCAGAAACGGTTATGGGTCAATGAATGGGAAAAATTGTGCAGATGTCAATGAATGTGAAGTTTACAGTGAAAACTTTTGCAATCGGAAATTGTCAACGAGCCACGCATATTGCGTAAACTTTGAAGGTAGCTATGAATGTATTTGCGAAGATGGTTACAAGAAGGAAAGAGGTACATGTCAAGATGTGAATGAATGTTATCAAAACCCTGACGATTATCCGTGCCATAAACATGCCACCTGTATCAATGCGATAGGCACATATTCTTGTGAATGTGATGATGGTTGGCATGGAAACGGAACAGAATGTTATGATGTCGATGAATGTTTCAATGCAACGTCTAAACATCTATGCACGGAGAATGCGAATTGCATCAACAGTCCTGGATCGTACCGGTGTATTTGCAAGCGTGGGTACAAGGGTGACGGCATATCTAAGTGTGAAGCATTGGGTTGTTTCCCTCCATCCTACTGTTCTGGCCAATACTCAACATCTTGGTGGACGCGCACTCCGTATATCAACTACGATAAACAAACGAAACAAGCCAGCGGATTGATTAAGGACATACTTTCACTCATCATACAGGACATTTGCAGGAACTGCTCGCAGCTCATGTTTACAAAGCCGCTCAATGGATCGATTGAGTTGGAAATAAAACTGGAGAAGAACATTACAGACTTTGCATTTCCACTCTACGGTTCAAAAGAACAGCTGAAGTTTAGAGGGTTTCCTTTTATACCGCTAGTGGAAGCACCTGGTGTTGCATTCTTCGTGAAGAAACAAAAGCGAGTAAACAGTCCTCTCATACAATCGCTCTCTGGTTCCTGGCCGATTCTCGTTATCACCATTTTACTGGCATCACTTTCGGGTGTGATCATTTGGTTCCTGGACACTGTACGCAACCCGGACGAGTTCCCACATTCCTTCCTTTCTGGATCATGGGAGGGGTTTTGGTGGGCATTCATCACCATGACAACAGTGGGTTACGGAGACAAAGCACCACGTTCTTTTTTCGCGCGATTGTTCGGGATTGTTTGGATTCTTATCGGCCTGGTCATAATTTCTACTTTCACGGCTACCATAACAACCGTGCTGACAGCGAGCAGTCTGGGTAACGTCGCAAAGCTTTACGGGACAAAAATCGGCGCCCTGGAAAACAGTGAAGAGTTTCGCTTGGGTGTGAAAAGAAATGCTGACGTCACAGGTTACGACTCGGTGTCGGATATTCTGGCGGCGTTGGAAGCCGGCGACATTCAAGGTGCTCTACTCGACACATTTATCGCCGGCGAGTTCCAGGGCGAGTTGGAGAGTTACAAACTGCAAGAAATACTCGAACACGTGTTCGTTTATGGTGTGGCGTTGTCACGTGACGCGAGTAGGTTGGAGGAACATGTTCGCGCGTACCTTGAAAGAAAGCAGAGTACAATATACGCTACAATATCGCAGGTCGTGAAGCCACTAAAGGAAAATAAAGCTTCAAAGAGCTCTGCTAGTGATGACGTCACATTGTTCGACTCCGGATCGGCGTTCTTCCAGCATATGTTATTGGCGGGATCGGGATTGCTGTTGGCGTTAGTTTTGGTGGGATTCACGTGGGATTATCTCTACTGGAGGCGAAAAAGGAAACTTAATTTCGCTTGGCGTGGCGCGGACATCATTGAGTATCAGAAAGGCGCTTTCAAGAAAGAGGTGGTCGACCTCAAAAAGCAAATCAActgttttgcgcatgcgtggATCGAACGGCTAGACGCCATGGAAACTACTCACGAACAACAGTTGAACCGCGTGCAGAAATGGTTGGGAAAGGTTCtactaaatattcccctaaactctgccaatcgcgaaaataaattccgcgaaattcagatatattacctcatccgcgaaattcccagtttttag

Transcript

ENSQNNT00000026690

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07885	Ion_trans_2	Ion channel	Family	Interproscan
PF00060	Lig_chan	Ligand-gated ion channel	Family	Interproscan
PF07645	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan
PF12947	EGF_3	EGF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008983	Homologous_superfamily	Tumour necrosis factor-like domain superfamily	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR013099	Domain	Potassium channel domain	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR001320	Domain	Ionotropic glutamate receptor, C-terminal	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR049883	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR024731	Domain	EGF domain	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24039	FIBRILLIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0015276	Molecular Function	ligand-gated monoatomic ion channel activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan