Gene detail

Detailed information of ENSQNNP00000026065.1 in Candelabrum cocksii

Genomic Location: :...
NR annotation: XP_004207331.2, ribosomal L1 domain-containing protein 1 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSQNNT00000027077

CATTCGCacattcaagatggttgtagaaaataaagaattaactgcagtcaaagaaaaagttccatttaaacgTGCTCAggTGAAGCTTGCGTTAAACGCACTGTTGGCGCATGTTTCCGAAGAAGCGAAAAAGAAGCCACGCAAAGACGAGCTATTCGAAAGAGATGAAACATTATGGCTATCCATGAGTGTACATCGAATTCCTGccatcaacaaaaaaacaaaaaagatCCCACTGCCGCATAGTGTCCATGGCAACGCAAGTGAGGTATGCTTCATTTCTAAAGATCCTGGAAAGATTGTGAAGGAGACCTTCCAAAAGAAAGGCGTGACAACAGTAACTAAGGTGATCAGCCTCACGAAGTTACGCAAGGAATACAAGTCGTTCGAGTTGAAACGCAAATTGTTGTCCTCGTATGATGTCTTTCTGTGTGATGATAGAGTTTACCATCTTGTTTGCAAGTCTCTTGGGAAAACGTTCTTCCGGCGGAGAAAGGAGCCGATACCGGTTAGGTTGAGGTATGATGATCTAAGGACGGAGATAAACAAGTCCCTCTCCTGTACCATGCTTAGAATGGGGCATGGACCCACAAGctCTATTAAGCTTGGTTCAATCAGCCTACTCAGTGAAAAACAACTCAGAGAAAACGTTATTCACGCGATGAAGGTTGTAGCGAGGAGCGTACCGGGTGAATGGAAGAAtgtcaaaagtttttttgttaaaacggCCGAGTCCGTTGCTCTTCCTCTCTACCAGTCCGCTCCTGTCCGAACGGTGAAGCAACTTGATGACGTAATCAGTGACAAGAAGGCCGTCAAAACCATCAAGTTCACGTTAGACGATAGCGATGACGGCGATGATGTCGGTAAAAACGACGCTGATGATGCCATTAAAAAGTCCGACAGTCTCGGTACAAATGAtgttattgaaaatgaaaatccCATCGATGAGAGTCAAATTTCCGACGAAGAGGTTGTCATCCGACGCGACGTTGTGGGCAGCGCAAAGAAGACTAAAGGTAAGAAGAATGTGAGTGAtggcaaaaagaagaaaaaggtgCAGAGCGAGAGAAAAGTCACTGGAAGTGAGCCtagaacaaagaaaataaaggAACCggaaatgaaaagaaaaacgaaACCGCAAGTTGACACCAGTCCAAAAAAGTGCcgtaaaaataaaagtggaaAAAAGTTGGCTGCAGTAAATAAAAGTATTTCCGCTGAGTAAATAACCAGTAAACTTCATTGATCGTGTTTTGATACTCGTCAAACTGGTTTCTTAAACCGGTTTAACTGAAACTTCAAGAAATTTGTGGCAACGCACatgttcaaatcaaaattagCATTTTTGTGGATAAAAGCCGcacaataaaaatttcttttttaatcaataaataatcTTTGACGGATTTCAGTTTTCGTAATTCTTTTATGGTAgtgtttaaaacaatattcGCAAGCGTAGTTAATgacgtttttaaaaagcatttcAGGCGTTGTTGTGTTGTTAATTATGAAACGCGAGACAAATTCCTTCGTGAAaagataaaacacttttttatttttgtaaacatgtTTCGAGACAAATTCTACGCTCGATTTTATAACAACAGTTGCGTTTTGTTGGTGTTCGTAATCGCTTCACGATCGTTaacttgttatttttaaatcgTTGGTTTATCGAATTTTCATTCGGTTcattttcgaatttttattAGAGAATAGAACAATAAAGATGCTGGAGAACAATGATTTAAGCGTTTGGCAAAAACAACGAACCGAGTTGGACAGTAAACTAGAAACTCTTCGTTCCGAGTTGCTGCTTGTTAAGAAGATGGATAAAGATATTACGCGGAAATTTATTCAGCTTGGATGCGAGATTAACGCGGTGAAAGAGAGGCAGCAAGAACATGGTTTTTATGAAGTTTTTAGTCCGACTGGACACGAggatacaaaattttaaaatttgcttggagtattgtttaaatgtttttctcgTGACgtgtaattttaaaaaccttaCATATTTTGGGTTTAATTGTATATTAATGAAAATTGTAAAAAGActtgtgtaaatattttaaatctttaattaattttaacgTGTTTATATTAGTTTTTATCTCTTCTTGTTTGTAGCCGAAAAACAATCttgttaataataaaaccTCGTTTCTGTGTCATTGTTTAGCCGCCAAATCGCTCAACGCCTCTTTTTAGCTGCTTT

Protein

Uniprot

Uniprot term	Description
O76021	Ribosomal L1 domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RSL1D1 PE=1 SV=3
Q5RCE6	Ribosomal L1 domain-containing protein 1 OS=Pongo abelii OX=9601 GN=RSL1D1 PE=2 SV=2
A4FV97	Ribosomal L1 domain-containing protein 1 OS=Bos taurus OX=9913 GN=RSL1D1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00687	Ribosomal_L1	Ribosomal protein L1p/L10e family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028364	Family	Ribosomal protein uL1/ribosomal biogenesis protein	Interproscan
IPR016095	Homologous_superfamily	Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain	Interproscan
IPR023674	Homologous_superfamily	Ribosomal protein uL1-like	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14775	UTP30, RSL1D1; ribosome biogenesis protein UTP30	-	Ribosome biogenesis	ko03009	deepkoala