Gene detail

Detailed information of ENSQPTP00000001485.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031559522.1, formin-like protein 20 isoform X1 [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000001934

ATGGCGAAGCTTGGGGATGATGTTCTTGAGTGGCAGACCGATCAACTTGTGGAATGGCTGCAACAGGAAGAGATGAATGACTGCATAAAACCCTTCACTACAAGAAAAATGAATGGACGTTCACTAGTGAACCTCTCAGAATTAGAAATCAAGGCCCTACATCATGTTTCAAATGACAGTAAAAAAAAGTTAATCAGATCAATTGAAAAGTTTAAAcgcagaaagaaagagaaaatggCAGCAATGTTTGGAAACCAAAAACTAGTACAGACTGTAAACACAAGGAAACCTCCATCCTTTTGCCAGGAAGATGATGcTGGCAGCGACGACGATGGCTGGGGAACAGACGAATGGGATAGTGATGGCTCACAAGATGCGTCGTCCGACGGTGATTACCTCGAACCTGAGGAGGACCTCTCCAAAACAGGTTCCCTAGGAAGAGAAGCTGCTTCCGTGCCTACTGGATTGgtTGCACAGCTTCGAGCAGGCATCGCTAGCAGCCTTACAAGATCACACAAGGCCCCACAACAGAGCTACcaagatgatgaagatattTATGACGAGCCTCCAGAAGAAGAAGAACTTTATGACGAACCCAGCGATAGTTCTGGTGGAGCGGTTGTTGTAAGACCACCTAAAAAACCTCCCAAACAAGAAGACAAAGGAGAATACTTACTACCTAGAGAGATGGACGGAGATCAGGATGTATACGAAGCGCctttagaagaagaagaagAAATATCTCCAAGACCCCCCGCACGACCGAGCAAAGCCAACAGATTTATCCCTACTCAAGTAGTTCAAGGAAACAAGTTTGTACCCATCAGAAGCAGCATCGATAACGATGAAAATGAGACGTATGAAATCCCTGAACTTGAAGACCAAGAAGACAGCTATGAAATACCTGGAGAACAGACCGTTCCCCCACCCAGACCGCCAAAAAAGTTCAGCGCTCCTGTCAACACTCCCCTCAAACAAGCTAAACAATCGAAACCATTACCACCTCAAAAGCCACAGGTTTCGCCTGGAAAGCCTTCATTCAAAGtTCCTTCGCCTCAGCCAAGTAATCAAACACAAGGAGCTACGAGACGCTTCCCGGGAACGAATGCTCAACAAAGTAGTTTATCACCCCAAGGCACACCATTCCGAACTCAGCCACCGCCGCCTGCACAAACAAAGTTCCAGCCACCACTAGGGAGAAAACCTACACCAGAACCGAAAAAAACAGAGTTTGGTGGATACCCTGGACGACAAGAGAGGAGTCCTCCACCAAGTCCTGTGAAATCTACAGGTGCAAGTATAGCTCCAGTGCCGGGCCCTAGAGCTGGGATCTTGAGTAAGTCGGAACCCCGTCCGTCTCCAAGAGGATCCCCTCTTCCTCCAGCAGCCCACAGGAAGCAGGCACCCCTACCAACAGAAAGACCTCCTCCACCAGAACCCAGGGCTACGCCAGGAGTGGAACCCGTGCCGCCTAACCATAGAGGTTTACCCTCTGTGCCATCGCCACAGATGACAGAACCAGTACCTCCCAGACCCCCGAAGATAGGCCACCCTGCTGGTACCCCACAGCCAATGCTACCGCCCAGACAGgGAGTTCCTCTGCCTGCTCCGCCTTCTGCTCCCTCTAGTCTGAGAGACCAAAGAGAGCAGTCATCTGCTTCAAGTATTGAGTCTACCTCTGCAGATGAACCCGTCATCTCACTACAGCATCTTCCTAAACCAGGAAAACGAAGTCTTCCACCCACTCCCACCGTAGATTCTAAGAAGAGTTCATTAGAGTTAATGAAGGAAGCTCCGTGGTTCCAGGGACCTGTGGAACGAAAAGCGGTCGAAGAAAGTTTAAAGCAATTTAATCAGAATGGCGCCTTTCTTGTACGCAACAGCACCAAGAGTCCCAACGACTACTCAATGTCTTTGATCTACAATGGAAATGTTCGCCATCTAAGAATTCCTCATAAGAACAACAAGTATGTGTTAGGAGATAGCGGCATTCAGCAATTTGACTCCATCATAGATCTCGTGAATCACTATCGTCAAAATGAAGTGGACCTCAAGAAGGGAGGCAAGACTAAACTAACAATAGCATGCCAAGTCTACAAATCCTAA

Transcript

ENSQPTT00000001934

CTTCCGGGTCGTGCGTTAAATCAGCATTGAACGAGATACGTAATAGACTGATACTAATGCTGATGCTCTGCCTTGACTAGGCTATCGTGTATTATTAATGATTCATAAATTACTCACCTCAGAGACTTGGTGAATTATTCTCTAAGCCATGGCGAAGCTTGGGGATGATGTTCTTGAGTGGCAGACCGATCAACTTGTGGAATGGCTGCAACAGGAAGAGATGAATGACTGCATAAAACCCTTCACTACAAGAAAAATGAATGGACGTTCACTAGTGAACCTCTCAGAATTAGAAATCAAGGCCCTACATCATGTTTCAAATGACAGTAAAAAAAAGTTAATCAGATCAATTGAAAAGTTTAAAcgcagaaagaaagagaaaatggCAGCAATGTTTGGAAACCAAAAACTAGTACAGACTGTAAACACAAGGAAACCTCCATCCTTTTGCCAGGAAGATGATGcTGGCAGCGACGACGATGGCTGGGGAACAGACGAATGGGATAGTGATGGCTCACAAGATGCGTCGTCCGACGGTGATTACCTCGAACCTGAGGAGGACCTCTCCAAAACAGGTTCCCTAGGAAGAGAAGCTGCTTCCGTGCCTACTGGATTGgtTGCACAGCTTCGAGCAGGCATCGCTAGCAGCCTTACAAGATCACACAAGGCCCCACAACAGAGCTACcaagatgatgaagatattTATGACGAGCCTCCAGAAGAAGAAGAACTTTATGACGAACCCAGCGATAGTTCTGGTGGAGCGGTTGTTGTAAGACCACCTAAAAAACCTCCCAAACAAGAAGACAAAGGAGAATACTTACTACCTAGAGAGATGGACGGAGATCAGGATGTATACGAAGCGCctttagaagaagaagaagAAATATCTCCAAGACCCCCCGCACGACCGAGCAAAGCCAACAGATTTATCCCTACTCAAGTAGTTCAAGGAAACAAGTTTGTACCCATCAGAAGCAGCATCGATAACGATGAAAATGAGACGTATGAAATCCCTGAACTTGAAGACCAAGAAGACAGCTATGAAATACCTGGAGAACAGACCGTTCCCCCACCCAGACCGCCAAAAAAGTTCAGCGCTCCTGTCAACACTCCCCTCAAACAAGCTAAACAATCGAAACCATTACCACCTCAAAAGCCACAGGTTTCGCCTGGAAAGCCTTCATTCAAAGtTCCTTCGCCTCAGCCAAGTAATCAAACACAAGGAGCTACGAGACGCTTCCCGGGAACGAATGCTCAACAAAGTAGTTTATCACCCCAAGGCACACCATTCCGAACTCAGCCACCGCCGCCTGCACAAACAAAGTTCCAGCCACCACTAGGGAGAAAACCTACACCAGAACCGAAAAAAACAGAGTTTGGTGGATACCCTGGACGACAAGAGAGGAGTCCTCCACCAAGTCCTGTGAAATCTACAGGTGCAAGTATAGCTCCAGTGCCGGGCCCTAGAGCTGGGATCTTGAGTAAGTCGGAACCCCGTCCGTCTCCAAGAGGATCCCCTCTTCCTCCAGCAGCCCACAGGAAGCAGGCACCCCTACCAACAGAAAGACCTCCTCCACCAGAACCCAGGGCTACGCCAGGAGTGGAACCCGTGCCGCCTAACCATAGAGGTTTACCCTCTGTGCCATCGCCACAGATGACAGAACCAGTACCTCCCAGACCCCCGAAGATAGGCCACCCTGCTGGTACCCCACAGCCAATGCTACCGCCCAGACAGgGAGTTCCTCTGCCTGCTCCGCCTTCTGCTCCCTCTAGTCTGAGAGACCAAAGAGAGCAGTCATCTGCTTCAAGTATTGAGTCTACCTCTGCAGATGAACCCGTCATCTCACTACAGCATCTTCCTAAACCAGGAAAACGAAGTCTTCCACCCACTCCCACCGTAGATTCTAAGAAGAGTTCATTAGAGTTAATGAAGGAAGCTCCGTGGTTCCAGGGACCTGTGGAACGAAAAGCGGTCGAAGAAAGTTTAAAGCAATTTAATCAGAATGGCGCCTTTCTTGTACGCAACAGCACCAAGAGTCCCAACGACTACTCAATGTCTTTGATCTACAATGGAAATGTTCGCCATCTAAGAATTCCTCATAAGAACAACAAGTATGTGTTAGGAGATAGCGGCATTCAGCAATTTGACTCCATCATAGATCTCGTGAATCACTATCGTCAAAATGAAGTGGACCTCAAGAAGGGAGGCAAGACTAAACTAACAATAGCATGCCAAGTCTACAAATCCTAACATAAATGAAAATCTTATTATCAGAATATAACATGGACAGCTGTGAAGGACTTCAGGTTCACTCCAGCTGTAGAACACAAAGCTTATTTGgaatttagatttttatatataataaggatATTATGCACTGTAATTGATGATGGTTCAAGGGATGGCCAAGGTATCCTAGTTGTTGTATCACTACCCAGTTAGGCAAGTTAGTTGATAAGTTGTTTCTAATACAATTAAACTGCATTCCCTTGGATTAATGTAGATGAGCAGGACTCGGAGACAAAAAACCCCTGGCACTATCAAAGAtcataagaaagaaagaaagaaagaaagttctTGCATAAAATAGAAACTGGATTCAGCAGTCAGATGAAAATCGACTTTCCTGATGTGCTGGTAATCCACTTTTGTATCctattttcttatatttttgtgACAAAATTAAGAGAATGCTTCCTCTAAGAGGGGGTAGAAACCTTTAAATGGATGTTCGTAATGTACACCatgtaaaaaatgttttgatttATTAGTTAAGTAGCATTTAAACACTATACTCCAGTCAGCTGCACCATTTCCAGTCTTGTGCAGAATGCTCATCAGCCgaatcacaagttttcaatagcaTTCAatggctgacagcacatgtTGGTCAGTGcttgaccaccatttggagcagacAATAAATTCAGGATActtatcagctgattgaaacccagaAATTATGTTATGTACATGTTTTgtagaaattaaagaaatttatTATTGTGAAAAGCAAAGAAACTGAACAAAAAACTATCTTTTCAAATCTCATCattgatttattttgttagtaataatattttgtaCTTTGATTTCACAATCCAATAAagattttgaatttattttctctATGATTTTT

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004547 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00017 all species →	SH2	SH2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000980 all species →	Domain	SH2 domain	Interproscan
IPR036860 all species →	Homologous_superfamily	SH2 domain superfamily	Interproscan
IPR013761 all species →	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR001660 all species →	Domain	Sterile alpha motif domain	Interproscan
IPR051184 all species →	Family	Tyrosine-phosphorylated adapter molecule	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19969 all species →	SH2-SH3 ADAPTOR PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0016477 all species →	Biological Process	cell migration	Interproscan
GO:0030971 all species →	Molecular Function	receptor tyrosine kinase binding	Interproscan
GO:0035591 all species →	Molecular Function	signaling adaptor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K07371	BLNK; B-cell linker protein	-	Primary immunodeficiency	ko05340	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.