Gene detail

Detailed information of ENSQPTP00000002197.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_048580633.1, uncharacterized protein K02A2.6-like [Nematostella vectensis]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000002844

AACGCTCTAAAAGAACTCACACCCCGTGAGCTCGAAGCAAAACTTGCCGAGATTCTGAACCTCACCAACTACCACATTTCTCTTCCTGAGGCTTGTGTTCTAGATTATTATGTGGCTGGATTTTGGtttacaaaagaagaaaatttcaACAACCAGCAGACTTCTGCATTCTTCacgcttttaaaaatattagtagaaaatataaaagACAAGCATATGTCACTGGCTGAGAGTCTAGTAGAGTTCAAGAGGCTACTTGTTGGAATCGGAATGGAGAACTGTCCTAAGAGTGGAGGACTTGAATGCTTTGATATCAGCCAAGCCAAAGTCATTACAAATTATTTTACCGATAGTTTGTTTCAGCATTTTAAACTCTACGAGTTTTTGTTTACTCAAGAACCTTCAGAAGAGGTCATAACTACCGAGGTGAAAGTAGAAGTACCACCAATGGCAGATATTCCCTTCCCTCCACCACTGGACGAGGGAATGACAGAAGACCTTTGGCGGGAGTACATCATGACCCCACCCACCACACCTGAACCCGAGACAAATGATGAGTGCAGCAGTAAAAAGAACAAGAGTATGATCAAGCTCACAATCGCAGGAAAAGAAGTCAGAGTCAAAGCAGATAATGGTGCAGAAGCCACTGTAATCCCATACCATCTGTACAAGACCATTACAAAGGCACCATTACAGAAAATAAAGCAGCCATTAAGGGGCTGGCTTGCAGCCGAGCCTGTACATCCAAAGGGTCGTGTGCGCCTTCCAACTCAGTACAAGTACCGCAAGATGAATTTGTTGTACCTTGTTGTAGATGGAGATTTCACACCATTATTAAGTTGTGATGCTGGCTTAGATTTGGAGGTTGTCAAGTTCATGAATCTAGAACTGATAGACCCACCACAACCTAAAGGGTTTAATTCACAAAAGAACCATGATAGAGAGGAGTTAAAGTTTGTGGCAGATCCAGTGCTGCGTGACTATATAGACTGTTTTAGCAACAAACCTGGTGCCCTCCCAGATGCAGTACATTTGGAGGTTGACCATACAGTACCTCCAGTGATACATCCCCCAAGAAAAATCCCAGTTGCACTTATAAAACCAGCACAAGAAAAGCTGAAAGAAATGGAAGAGGATGGCATCATCGTGAAAGAAGAGGAACACACACCCTGGATATCATCAATGCTGGTGatggacaaaagaaaaggaaaagatagGAACTCACCACCATCAAAGAACAGTGTAAGAATTTGCATTGACCCGAGGGACCTGAACAAGGCCCTGAAACGACCCCACTACCCAATGGTGACGGTAGAAGAAGTAGCCAACCGACTGCCTGCTGCAACAAGCTTCACGACTCTTGATGCATGCAGTGGATATTGGCAGCTTCCCGTTTACGATGAGAGCTCTAACTTGACTTTTAGCACTCCTTGGGAAAGATACCGATTTACAATACTCCCTTTTGGGATACATTCAAAAGAGCAGGTGGATGAACTAGCCAGGGAATACTGGGGCTACAAGGAGGAGTTGAGTGTAGAAGACGGACTGCTGTTTAAGTCAGACCGAATGGTTGTTCCAAGAGCACTGGGAGGTGAAGTACTGGAAGACATCCATGGAGCTCACCTGAGGGTGACAAAAAGCCTCAGTTTTGCTAAAGACTATGTCTTCTGGCCGTCAATGACAGCCCACATCAAAGATAAAGTTAACTCATGTGCTATCTGCAATGCATTCCGCAATCAGCAGCAGAGGGAGTCATTGCATCCACACGACATTCCTGGATTGCCCTGGCAAGTAGTTGGAACTGATATAGTCAAGTATGGTGGCTACTCGTATCTGCTAGTCACTGACTTTTATTCAAagtgttttgaaataaaatcgTTACGTCAGATTACTGAAACTTGTGTAATTAACAACTTAAAGAAAATCTTTGCACGTTTCGGAATCCCAGCTGAAGTAGTCAGTGACAATGGGTCACAATACAGCAACACCGGAAACCTGTTTAACAGCACTCATGAATTCAAACGGTTTGCAGAGGAATGGGGATTCCGACACACGACTAGTTCACCAGAGTATCCACAGTCAAATGGAGCaaaaagaattttgaaaaaagctGAAGCAGATAAAAAGGACCCGTTTGAAGGACTCCTCAAGTACAGAAACACCCCTTTTGACGATATAGGGGTCCCACCTGCTCAGCTCCTGATGAGTCGACGAACTCACACAACACTACCAACTCACAGGCGTCTCTTAGTACCACGAGCTGTAGAACCTGGCCATGTTCAGAAAGCACTTAAGCAGCGCCAGGATGTTTCAAAGGCTAACTATGACAAACGCAGTCGAGACCTACCACCTCTGCAAGCTGGGGAAAAAGTACGGATTCGTCCAAACAAGGCGAAAGAATGGCGTAAAGCAGAAGTTTTGCCGAGATCCTATGTGGTACGAGATGTGCAAGGACACACTTACAGGAGGGATAGAAGGCAAATCATTGCAGTTCCAAAAGATCAACACATGATCCCTCAGTTCAAAACGACCTTTACGAGTCCTCGACCTAAAGACCCTCCCACAAAGACACATGACGAGAAAACGCACTCAGTGTTACCGCCACCCATCTCAGAAGGGATCTCAGAAAAACCAAAATCACCAGTACATCATTTGCCGATGGCAACACGATCAGGGCGACCTGTAAAGAAGCCCCAAAGACTAATTAAACAGTGTTGA

Transcript

ENSQPTT00000002844

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8CDT7	Ciliary-associated calcium-binding coiled-coil protein 1 OS=Mus musculus OX=10090 GN=Cabcoco1 PE=1 SV=2
Q8IVU9	Ciliary-associated calcium-binding coiled-coil protein 1 OS=Homo sapiens OX=9606 GN=CABCOCO1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005785 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17921 all species →	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF14769 all species →	CLAMP	Flagellar C1a complex subunit C1a-32	Family	Interproscan
PF00665 all species →	rve	Integrase core domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR041588 all species →	Domain	Integrase zinc-binding domain	Interproscan
IPR032727 all species →	Family	Flagellar C1a complex subunit C1a-32	Interproscan
IPR001584 all species →	Domain	Integrase, catalytic core	Interproscan
IPR050951 all species →	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984 all species →	PROTEIN CBG26694	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0015074 all species →	Biological Process	DNA integration	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000002197.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.