Gene detail

Detailed information of ENSQPTP00000003341.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031557017.1, tetratricopeptide repeat protein 25-like [Actinia tenebrosa]
Species Actinia mediterranea · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000004197

GCAACACCACCTTGACAACCGATCTCGCGGCCATATTTACATCCAAGCAAATAAGAAGTCAGTGTGTTCAGTGAACGTCCTCAAAAAACCCTCATATTTATCctctgttttttttattaacaaTGTATGAAGACGacgaagaacaagaagaaggtCCTAAGAGCTCCTTTTCAACGTATTTAGCAGAAGGAGACGTGCTTTACAAGCAAGGAGAGTACAAGAAGGCATTGGATAGTTATTCGTTGGCCTTAGAATTAAAACCTACAGACAAGTTTTGCCTTGTAGCCAGGTCCAAGTGTTACCTTCAACTTGGAGACAATGCTGCTGCTTTGAGAGATGCTGAGGCAGCTTTGGAAGATGACAAGGACTTTAATAAGGGGTTGTATCAAAAAGCAGAAGCCTTATATGCCATGGGGGACTTTGAATATGCTTTGGTGTACTATCACAGAGGGAATAAACTCAGACCAGAGTTACAAGAGTTCAGACTTGGAATCCAAAAGGCTCAAGAAGCTATTGATAACTCTATTGGAGATGCAGCCAATGTCAAACTAGAAAACAAAGGggatttatcattttttgccAAGCAAGATGAAATGAAAAAGCCAAAAGGCTATAACAAGCCAAAGACACAAGCCACAAGAACACAACAGCAACAAATTAACAGAGGCAAGAGCAACAAGAGCCCTGCAGCATCTGATAAAACTGTCAAACAGCTTTTGGGTGAAATGTATGcagacaaggaatacttggaAAAGCTCCTGAGTGACGATGATTTagtaaacaataaaaataacaataaccaAATACATGGGCTTGTGACCAGTGGTCTTAGCTACCTGGAATCAAGGACAGAATTCTGGCGGCAGCAGAAACCTTTGTATGctcgtaaaaaagaaaaaccaaagcCCAAAAAAGTACAACAAAAGAGTAAACCTGCAGACACCACAAAGTTTATTTTACGATCCTTGGAAGAAATTGATCTTGCGCTGGCTGAAGGAGATGCTGAGGGAAGCTTGAAACAGGCTCAGTCTACGTTAAGAACGGTTCAGTCACTTGGTGAAGATAGTGTGCCCAATAAGGAAGATGTTATTGGCAACTTACATTCTTGTATTGGGAATGCCTATCTAGAGATggatgaaactaaaaaagctCTGGACCATCACCTAAAGGATCTTAAAATTGCTGACAAACTGGACAATAAGGTTGGAAAATCAAGAGCACTGGATAATCTGGGCAGAGTTCATGCCAAGGCAGGCGAGTATGATCGGGCTATCGACAAATGGATGGAGAAAATGCCTCTCATCAAAACACCACTTGAAAGTACCTGGCTCTTCCATGAGATTGGTCGCTGTCATCTGGAGCTAAAAAATTTCCAAGATGCGAAAGAATATGGTCAGAAGTCACTTGCAGCAGCACAGGAAGCTGACGACCAAGTATGGCAGCTCAATGCTACAGTTCTTATTGCACAAGCAGAAGTTAAACTGGATGAGCTTCAAGATGCACTAGGGTCATTCCAGCAAGCCCACGACCTCGCTAAAATATTGGAGGACGAGGCTGCTGAGAATGCTATTTCTAAAGCTATCAGGGATGTCAACGACAGAATTGCTCAAGGGGTCAAACCATCTGAAGGCCAAGATCAAGCAGAcaaagatgatgaagaaaaaactgaagaaaaagATGACAAAACAGATAAAGACAAAGAAGAAGAGCCAAAGGAAAATGTTGCAGAATCTACTGAAGGGCAACAAGAAAAGGAGAAGGAACTAGAACAAAAGGAAGATGACGCAAACCAAGAAACAGCTGCTGATTCATGAAACTAGTCAATAGAAACTGTATTTTATTAGAATATGATCTCAAGCATTACTAGTCAATAGTGCCTTGTGCACTACTCAGGCCTTTTAATTCAACGTCTTTTGTGAACAATTTGTCCATGTAATATAAGAGATTATGTATTTGACTTTAACCTTACTTGAAATTATTGTCATACTGACATACATTTATAtgctataataaataaaactgtATTATATTCTCTGATCTCCCCTTAAACCTTATGTCATAATAATTCAGTGTTGTGAAAACGTTTTTGATAATAGAATACAAACCATCTTTGGAAGAGTGGTGTACAAGTCTCAGGGTGGGGTGGACTGGGGGGTAGGGCccaggggggtactcccctatattcgctatacaggtacatgccgccaaacagtgggtatggttttcagcgattttactctggaacaagGTATATAAAATCATGCTCGATCtaggacagggtatatgaaatcacactctctcctctctgggaCGGTATCTATTTTCACAATGCGGGAACTGGGTATGATTTTCAgagatcttgctctggaacagggtatgaatgtcggtgatttttttctggaacagggtcatggttcagagggctcagcagcacatccctaccctaaatgggcaagagtacccccagGGGGTAGGGGGACAAGCTCAGTCTGAAAATTCACACCAAAACCATAGAAACCTATCAGTATCTATAAACACAACCCCTTAGTTTTAAATACCAACTCCAACTTCTATTCTTACACATACTAGTCTACCATAAGTCCCCCCTGGC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q32NU8	Outer dynein arm-docking complex subunit 4 OS=Xenopus laevis OX=8355 GN=odad4 PE=2 SV=1
Q7ZU45	Outer dynein arm-docking complex subunit 4 OS=Danio rerio OX=7955 GN=odad4 PE=2 SV=2
Q9D4B2	Outer dynein arm-docking complex subunit 4 OS=Mus musculus OX=10090 GN=Odad4 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007031 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13424 all species →	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF07719 all species →	TPR_2	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR040111 all species →	Family	Outer dynein arm-docking complex subunit 4	Interproscan
IPR013105 all species →	Repeat	Tetratricopeptide repeat 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23040 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24254	ODAD4, TTC25; outer dynein arm-docking complex subunit 4	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.