Gene detail

Detailed information of ENSQPTP00000006092.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031569357.1, hemicentin-1-like [Actinia tenebrosa]
Species Actinia mediterranea · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000007377

agaggctttgaaccatcacgtgatggcagctaTGAAAGGAGGCAGGAATAGTTgattctggtctaatctgatttacatgagaaagaattcagtttcccggggggggaggggggggactattgttatgtcctctgtcatggctgccatcaagtgatggtgcaaagcccatatatttattatttatcatatattgTTATATAAATAGTTTTTGGTCTTATAAATATAGTCCagtctcgtacccagagcctgcgtttatTCTGGCCTGCGGGGGAAAACGAGGGCACTGGCATATTCCATTTATGGCGCATGCCAAGATTGAATCTAGTCTTAACCCTGTTACTCGTCGTTCAGTGTTTGTCTCTATTGgTTGTGTGAATGTTAGACCATTAGGAGTAGCCAATAGGACAATGGTTCCTGATATTCAGATGTCATCATCAAGTTCTTTCAGAGAATCAGTCGACTACCTCACGGCCAAACATGGCCGACTGCATACGTCTAGAGCCTGGTGCCCAGCGAGTTTGGGAGGCGATGATTGGCTACAAGTGGATATGGGAAATTATTATAATGTGTGTGGTGTGGCGACACAGGGGAAGGAGTATCGGACAGACGAGTGGGCGACTAACTATACCTTATCGATATCACTTGATGGTGTTACATGGGTGGAATATAACGAGGACAATAGATTGAAGGTTTTTGCTGGCAACATAGATGGAGTCTCAGTTGTACGACAAAACGTCACTTCCGTCTGGGCGCGATACGTTCGCTTCTATCCACGGGGTTACCAACTATGGCCGTGTCTACGAGTCGAGATCTACGTCGAATTCTCCCCACCTATCATCACAATCAAACCAGAAACTCAAACTATCGCAGTCGGCAACCATCTCTTACTTAACTGTCTCTCCAAAGGCTCCCCAAAACCCAAGGTCACATGGTCTCTTAACGGAAATGACATCATCTTTGGCGAAGTGTTGTTGAATGGTAGCTTGTTGGTGAAGTCGGTTGAAAATGATAAGAATTTCGAAGGGGAATATCGTTGCGTTGCAACGAATAAAGAAGGATCAGCTTCCAGGAACGCCGTGGTTATTGTTCACGAGAAACCTAAAATTCTGAACTCCCTACCTTCCTACAGTCCATATCTTCGAGGGAAAACCGCTGTCCTGTCATGCTACGGCGTTGGTGATCCAGTACCTTCTATCACGTGGACAAAAGATGGCAGCCCGCATATACCACGTGGTACCATACATGCCGATGGTCATGTCCTCGTGATCAGTCAAATATCAGCACGTGACCAGGGCGTGTATCGATGTGTGTTGTCTAACTATCTTGGCTTCGCAATGTCTGCTACCAATCTTACAATTTTAGATCGACCAACCATAGATACAGTACGAACACGAAAAACTATACGCGCCATTCTACACCATACTATTAATATTGGTTGTTATGGAAACAGTATCCTGCCTTTAACCTATACATGGACAAAAAATAAGGTGGCAGTTACAGATAGTGATAATCATGGAAACAATATGGTTCGAGTATTCGGTAACTTGTTGATAATCACCCCAAATGAACCACGTGATTATGGCACGTATGTGTGTCACGTGAACAATACGGTGGACACAGCAATGTTTGAGATCGAGGTTGTTCCATTTCACCACGAAACGAACCAATCAGGCACATTTGCAGCTCTCAGTAACTCACCTTCCTCCTGTGAAGCCCGCCTTGGGATCATCATTTCACTAGTGATAGTATTCCTTCTATCCCTGGCTCTCAACTTACGTCTAATCTACCGATACCGCCAAATGAAGAACGCTAGTAAAGCCTCATTGAAGTCAATTTCCTTGGGGAAGAAGATGAATGCCGAGGGTTCAAACCTCATGAAGGATACAGAGATAGCTTGGGATAACCTAATACCTGCAGGACACGGAGGCCCGTTCGTGAATGCAGGAATCGAGAGAGACACAGAGCCTGCGATTCATTACAGAAAACAAGTTGACGATGACTAACATCTCTAGTTCGGTTGTCTATAAATTACGCCGCGTTTGGCAATCAAGGGTAGTACCGCCATATTACTGCGGCGCTCTCCTCAAGGATGGTGTAGTTATTATACTGCATGCACTCGATCGCCTCTCACTTCTGGGGTCTCCGGTTCTATTCCTGGACTCGGCTTAACAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A4IGL7	Peroxidasin OS=Xenopus tropicalis OX=8364 GN=pxdn PE=2 SV=1
A2AJ76	Hemicentin-2 OS=Mus musculus OX=10090 GN=Hmcn2 PE=1 SV=1
Q96RW7	Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000557 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00754 all species →	F5_F8_type_C	F5/8 type C domain	Domain	Interproscan
PF13927 all species →	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF00047 all species →	ig	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR000421 all species →	Domain	Coagulation factor 5/8 C-terminal domain	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR003598 all species →	Domain	Immunoglobulin subtype 2	Interproscan
IPR013151 all species →	Domain	Immunoglobulin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10075 all species →	BASIGIN RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007156 all species →	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0007411 all species →	Biological Process	axon guidance	Interproscan
GO:0030424 all species →	Cellular Component	axon	Interproscan
GO:0070593 all species →	Biological Process	dendrite self-avoidance	Interproscan
GO:0098632 all species →	Molecular Function	cell-cell adhesion mediator activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000006092.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.