Gene detail

Detailed information of ENSQPTP00000006524.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031568102.1, AP-2 complex subunit alpha-2-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000007996

ATGCCGGCCGTTAAAGGCGAAGGGATGCGAGGACTAGCGGTCTTTATCTCCGACATACGTAACTGTAAATCGAAGGAAGCTGAGATAAAGCGTATCAACAAAGAACTCGCAAATATCAGGAATAAATTCAAAGGTGATAAAACGCTGGATGGATACCAGAAGAAAAAATACGTCTGTAAATTACTCTTTATCTTCCTCCTTGGACATGATATTGATTTTGGTCATATGGAAGCCGTGAATTTGTTATCATCCAACAAGTACACCGAAAAACAAATTGGATACCTTTTCATATCAGTTCTCGTCAGTGCTAACAGTGAATTGATCAAACTGATTGTCCAAAACATCAAGAATGACCTGTCAAGCCGCAACTCCATCTTTGTGTGCCTAGCGCTGCAGTGTATTGCGAACATCGGCAATCAAGAAATGGTTGATCACCTTGGTATCGAGATTCCCAAACTGTTGGTTTCTCCAGATACCACTGATAATGTGAAGCAGTGTGCTGCATTGTGTGTGTTGAAGCTGTTTAGGTTGAAGCAGAGTATTCTACCACCAGGGGAATGGACTTCAAGGATTGTACAGTTATTGAATGATAAGCACTTGGGAGTAGTGACATCTGCATCCAGCCTTATTCATGGTTTGGTCTACCACTACCCTGATGAATACAAGGGATGCATCCAGCTTGCAGTATCAAGGCTGAGTAGGATTGTTACCTCATCATACACAGATCTTCAGGATTATACTTACTACTTTGTTCCAGCCCCATGGCTTTGCATCAAGCTGCTAAAGTTGCTGCAGAGTTACCCACCACCAGaTGACCCTGCTATTGCAGCAAGGCTTCATGAATGTCTGGAAACAATTCTCAATAAGGCTCAGGAGCCTCCCAAATCCAAGAAGGTGCAACATTCCAATGCTAGGAATGCCGTATTGTTCGAAGCCATCAACCTTATCATCCACATGGACAGCGAACAAAGTTTACTCATAAGAGGATGCAACCAACTTGGGCAGTTCTTGACGCACAGAGAGACAAACTTGAGATATCTTGCTCTAGAAGGTCTTTGTCTGATGTCCAACAGTGAGTTCTCTGTCGATGCTGTgagaaaacatcaagaaacaGTCATGGGTGCTTTGAAGACTGAAAGAGATGTCAGTGTGCGTCAAAGAGCTGTGGATCTGCTGTATGCAATGTGTGATAAAAACAATGCAGAAGAGATTGTTTCCGAGATGCTCGACTATTTAGAGACAGCTGATTACTCCATCAAGGAAGAAATGgtcTTAAAAGTAGCAATCCTAGCCGAGAAATATGCCACCAATTACACTTGGTATGTTGACACCATCTTGACGTTAATAAGGATCGCTGGAGATTATGTCAGCGAAGAGGTTTGGTACAGGGTTATTCAGATTGTCATCAACAGAGACGATATTCAAGGTTATGCTGCAAAAACTGTCTTTGAGGCTTTGCAATCTCCTGCCTGTCATGAAAACATGGTCAAAGTTGGTGGATATATCTTGGGAGAATTTGGAAACTTAATCGCTGGTGACCCTCGGTCAAGCCCAATGGTTCAGTTCCAGCTTCTTCATAGCAAGTTTCCTTTGTGTCACAAATCAACAAGAGGGCTGCTCTTGTCAACGTATATCAAGTTTATCAATCTTTTCCCTGAAATCAAGGGCTACATTCAAGAGATCCTGAAAAGCGATTCAAACCTTCGCAATGCAGATACTGAGATACAACAGAGAGCTTTGGAATACTTGAGGCTAAGCACTGTAGCCTCACCAGATGTATTGGCCACAGTTTTGGAAGAAATGCCCCCTTTCCCTGAGAGGGAGTCATCGATCCTTGCCAAACTCAAGAAGAAGAAACCAAATAGTgttaaagaaaaagatgaaaaaccaGAGGCTGAAAAACCAACCTCAAATGGTCAAGTTTCTACTGTTGAAAAAGTAAGTACGCCTGGAATGatgtttttgtttttagatttAATGGCCATAAGTTCACCAGGTGCTGTCCCTAATGCAGCACCGTCAGGTGGTgggttgttggttgatgtGTTTGAGACACCTGCAGCAAGTGCTATTAGTGGAAGCTCTCCTGCGGTAACTCCTGGTGCAGAAGAAATGCTTAAAAAATTTGTATGTAAGAATACTGGAATTCTTTTCGAAAATGATATAATCCAAATTGGAGTCAAATCTGAATTCAAAGATGTTTTAGATATTGTACATATTTTTCTTAACAAATCTTCACGTCTCCAAGTCGACATTAAGCCTCCTCCACCAGCGGTGGATGGCGGAGCCCAGGTCCAACACTTCATTACTGTAGAATGTCTTCAAGATTTTTACCAtttcattgttttcttctcTCTCTTCACCAGTGTTAGTGGAATGGTGCAAAGTCTTAATCTCAAGATTCCAGTATTCCTGTCCAAGTTCTGTACTTCTGCAGAGATGAATTCGCAAGATTTCTTCACTCGCTGGAAGCATCTTAGCAATCCCCAACAAGAAAGCCAAAAAATATTCCAGGCCAAATATCCTATGGATAATGCTGCTATCACTACTAAGTTGACAGGGTTTGGCATTGCCATCCAGAACAACGTTGACCCCAACCCAGAAAACTTCATTTGTGCTGGAATAATAAAAGTTAAGGTAGCACAGATTGGATGTTTATTACGACTAGAGCCGAATCGACAAGCACAGGtaatgaaaaatttttttgttattaaattattttgtcCTGACAagggttgttttttttttttttttcaatttgattCTGAATTTGTACACAAAATTTTGATCCCTGATTCCAAACATTGTGGCccactttga

Transcript

ENSQPTT00000007996

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q0VCK5	AP-2 complex subunit alpha-2 OS=Bos taurus OX=9913 GN=AP2A2 PE=1 SV=1
P18484	AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3
P17427	AP-2 complex subunit alpha-2 OS=Mus musculus OX=10090 GN=Ap2a2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003821 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02296 all species →	Alpha_adaptin_C	Alpha adaptin AP2, C-terminal domain	Family	Interproscan
PF01602 all species →	Adaptin_N	Adaptin N terminal region	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013041 all species →	Homologous_superfamily	Clathrin adaptor, appendage, Ig-like subdomain superfamily	Interproscan
IPR012295 all species →	Homologous_superfamily	TBP domain superfamily	Interproscan
IPR003164 all species →	Domain	Clathrin adaptor, alpha-adaptin, appendage, C-terminal subdomain	Interproscan
IPR017104 all species →	Family	Adaptor protein complex AP-2, alpha subunit	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR002553 all species →	Domain	Clathrin/coatomer adaptor, adaptin-like, N-terminal	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR050840 all species →	Family	Adaptor Complexes Large Subunit	Interproscan
IPR009028 all species →	Homologous_superfamily	Coatomer/calthrin adaptor appendage, C-terminal subdomain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22780 all species →	ADAPTIN, ALPHA/GAMMA/EPSILON	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0030131 all species →	Cellular Component	clathrin adaptor complex	Interproscan
GO:0015031 all species →	Biological Process	protein transport	Interproscan
GO:0030122 all species →	Cellular Component	AP-2 adaptor complex	Interproscan
GO:0035615 all species →	Molecular Function	clathrin adaptor activity	Interproscan
GO:0072583 all species →	Biological Process	clathrin-dependent endocytosis	Interproscan
GO:0030117 all species →	Cellular Component	membrane coat	Interproscan
GO:0140312 all species →	Molecular Function	cargo adaptor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11824	AP2A; AP-2 complex subunit alpha	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.