Gene detail

Detailed information of ENSQPTP00000006789.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031569109.1, spliceosome-associated protein CWC27 homolog [Actinia tenebrosa]
Species Actinia mediterranea · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000008386

CTGGtttgtgaataaaaaccatgttTTTTGGTTTAAATATCTCCTGGAAAGAAGAACTCTGGCGGTCATTTTGGTCAACGTGGTTCCCAGCCACGCATGAGTCAACGTGGTTATCCGCTGGTTTATCGACGGGCTGAGCATGTCTGGAAAACattgaaaaggttttggagtaaattttgactttttaatgaaataaataagcaaAAATGAGCAATATATACATCCAGGAGCCTCCTACTAATGGAAAAGTTTTGTTAGAGACATCTGTTGGCGATATTGATATAGAGCTTTGGAGTAAAGAAGCTCCTATGGCATGCCGGAACTTTATTCAGCTATGCTTGGAACATTACTATGATGATACTATCTTTCACAGAATTGTAAAAGGGTTTTGTATTCAAGGAGGTGATCCTACTGGCACAGGCTTTGGTGGGGAATCTGTATATGGTAAAAGGTTTAAGGATGAGTTCCATCAGAGGTTAAAATTCAATAGGCGTGGTCTGGTTGCCATGGCAAACTCAGGACCAAACGACAATGGCAGCCAGTTCTTTTTTACTTTGGACAGAACAGATGATCTGAATGGAAAGCATACCATATTTGGCAAGATTACTGGAAATACCATATATAACATGTTGAAAATGGTTGATCTAGAAGTAGATGATAATGACCATCCTCTTTACCCACCAAAGATTAAAAGAACAGAGGTATTGTCCAACCCTTTTGATGACATTGAACCAAGAAATAACAAGATGAAAAAAGACGAGGCTCTAGCACCTAAGAAACCTAAGGCCAAAGGCACCAAAAATTTCAGTTTGTTATCGTTTGGAGAAGAAgcagaagaagatgaagaagaagtaATTAATGTTGGCAAGgaattgaaaatgaaaagcagCCATGATGTACTAGATGACCCAACATTAAGTAAACAAACTGTGAATCAAGATGCTTCAAAAGAGAAAGACGGTGATAAAAATCTCGGTGAACAAGCTCGGCAAAAGCTCAAGAAACAGACTcaagaatatgatgatgattctaGTGAGGACGAACCGACTGAATCAACAAGCAAAAGTAaagaacttcgaaaagaaTCAACAAAGTTGctaaaagaaatcaaagaatCGAGGAGAAAAGCAGCGAACAAGGAAACTGAACCTGAAAGTAAGACTGTTGCATCGAAAGATACATTATCTCGCGTTGTTGCTGATTTTCGTGCTGAGAGAGACGAATATGTTGCAAAAGTCAAAGGAACAATAAAGGCCAAAGGTGATGGGAGAAGTGAACAAACTTTCTCTCTACTTGCTGACTTCCAAGCCAAACTGAACGAAAAGATAGATGAAGAGAATTCAGATGAAGAAAATTCAGATAAAGATGAAGGAGATGAAAAATCGGATGACATAGGATGGATGACGCACGTATTACATTGTGAAGAAGGAATGAAACAAAAGGTCAAAGACGCAAACATACAAGACGAAGATACCTACGAAATATTCGATCCAAGAAACCCAATCAACAAACGAAGAAGAGAAGCCAGTAAAGAAGCcatgaaaggaaaaagaagaaaagaaagatagGATAAACAAACGAAAAGGGACCATAGCCACACAGCCAACTTGTTTTGAGCTCCGTCTGTTTAAAAGTcgcacggcagccatgttgtagCATAAAGAATGATAAgatttttaatcctttaggAATAGAAATCTCTTTTAATGCGAAAGCATTGCGTTGTTCATGCCCTGGCTACATGGCTGTCGTGAGCTCATGGCTCATTACTGTCCAGCAATATCATGATCAATTCTCTTAAGGCTGGAGCCAAGAAAAAAAGGCATGGACTTCTCATCTGTTAACTCAATATTGCTTCATTAACCAACTATCGTTTGAAAAACTAGTAAGACGAGGAGTTTCGCGATAGTTATTGGAACTTGGACTTCCCTGGGCTGCCTGCACGCAATAGTTTCCCTGATGAAGACTAACAGTTTGCAGTCGAAAAGTCGCGGTCCTCTACCAATGACCCTCAATCGTGAGACAAATAAATAAGTATCATTTATTACTTTTCCATGATCAGTCGTATACCTGTAGTTACCCTCCACGCAGGCATGACTTGGGGTGCTAATAAACGCATCTTGTATTGGCATACACCATGCAGTCTGAAGAAAACCATTGGAGCCGGATAGTTGGCATACCTACTAGTGTCATTCAGGTGCCTGCTTGCCTTAAGCACCCTGGGTTTTGTGTAGTCTATAAAGcagatttatttgtttgtaaatAGATTATCGGTTCATAGAACTGAACTAGGACTGTATTCATGCAGTTTTTAAGTAAAATACACTGATTCCGGGCGGCTTAGCTTGGGTGATCACCGAAGAATGGGTAGTTTTCCCAACTCGAATTCAGAATCATCT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7ZW86	Spliceosome-associated protein CWC27 homolog OS=Danio rerio OX=7955 GN=cwc27 PE=2 SV=1
Q4R713	Spliceosome-associated protein CWC27 homolog OS=Macaca fascicularis OX=9541 GN=CWC27 PE=2 SV=1
Q5R7W3	Spliceosome-associated protein CWC27 homolog OS=Pongo abelii OX=9601 GN=CWC27 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001075 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00160 all species →	Pro_isomerase	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029000 all species →	Homologous_superfamily	Cyclophilin-like domain superfamily	Interproscan
IPR002130 all species →	Domain	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	Interproscan
IPR044666 all species →	Family	Cyclophilin-type peptidyl-prolyl cis-trans isomerase, cyclophilin A-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45625 all species →	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000413 all species →	Biological Process	protein peptidyl-prolyl isomerization	Interproscan
GO:0003755 all species →	Molecular Function	peptidyl-prolyl cis-trans isomerase activity	Interproscan
GO:0071013 all species →	Cellular Component	catalytic step 2 spliceosome	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12737	SDCCAG10; peptidyl-prolyl cis-trans isomerase SDCCAG10	EC:5.2.1.8	Chaperones and folding catalysts	ko03110	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.