Gene detail

Detailed information of ENSQPTP00000007357.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_020916268.1, GTPase-activating Rap/Ran-GAP domain-like protein 3 isoform X2 [Exaiptasia diaphana]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000009161

ATGGCCGCCAGTCGACGACCCAGAGCCTCAACATTTTCAACCTTCAGTGTTCCATCTCCTGATGTTGGTAGGAGACCAGGATTGAGTAGAAGACATTACTATGGCTCCCTGGAAACTCTGAACACGGCGAATGGTAACTACGAAACGTCTGGAGTAACGCCGAAGTTTCGCATCGAAAGCGGAGAAATCGGAGGCCTGCAGAACGGAAGTCCAACTTCGAGTCAGGGAAGTGTGGTTCATTTGGAAAACCCTGAGTTCCAAACACGATGGTACTTCAAGTACTACTTGGGCAAAGTTCATCAAAACTACATTGGTGTGGATGGCAAACAGAATCCTTTTATATTATCAATATGCCTAACAGCAGCAGATAACTACGATGTACCACAGTACAGAGCGATCTTGTGGAAGAAAACTGGCAGCGAAAAGAAATGTATTCCTTACTATGCAAACAAACCTGTTTCACCAAAAGTCATTATCCAATCGTTTGGTATCGAGAAGTGTGAAAAAGGACCAAAAGAGGTTCTCAGTCCAGAATTTCAACAGGAGCTTTTAACGCTTGAAGAACAAGAGGGATCAGTGAATTTTAAGTTTGGAGTGTTGTACGCTAAAGCAGGACAGACCAGCGATGATGAGATGTTTAGTAATGAAACTGGTAGCGAGGATTTTGATAATTTCCTGGACTTACTTGGTGATAGAATCCCTTTACGGGGCTGGCAGGGATACCGTGGTGGACTCGATGTTAAAAACGACATGACAGGCTCACAGTCAGTCTTCACAGTGTACGAAGGACACGAGATAATGTTCCATGTGTCGTCGCTTCTTCCTTACACACCAGACAACCCCCAACAGGTTGAGCGTAAACGTCACATAGGTAACGACATAGTAACAGTTGTCTTCCAAGACACAGAAAACGAGGACGACAAACCTTCTTTTACTCCACTCGGAGTGAAATCTAAATTTATTCATGTATTTGTATTGGTGACTTATATTAAGTCGGATGATAGTTATAGAGTAACCATATTCACAGAAAAGAATGTCCCGATATTTGGTCCACCGCTCCCTTGTCCTACAGTCTTTCACAATCATCAGGAGTTCAGAAATTTCCTTCTTGTTAAACTTATCAACGGCGAAAAGGCCGCGTACTCCTCACCGATCTTCAGCAGCAGACGACAACGAACACTAGAGAGCCTCATAACAAGACTGTGCCAGGAACAGATGCACGAGaaaATTGGGGTTCGCAAGTCATGGGGAGATGCGATATCAGACCAGCCGAGAGGAAACAGACGAAAAGAGACAGAAAGAGAGCAGCTGTTTGTACAGTTTGGTCAGTCGCTGAAATTGAAAACTATAGTAAAAGGTGACGCCCCTACGAGCCTCATTACGACGTCAGCCAATGTCAAAGCTGAGCCATGGCAACAGCAGACCGTATATGAAGATTTCCCTCATAAAATATTGTGTGGAGATTCTTGGGGTGATGCTTTAGTTCTCGGTACCGAAAGTGGAATCTTCGTCGTACTCGGTGATAGCATTCGTCAGTTATTCGACAAGTCAGTCATCACCAAGCAGCTAAGTGTAGACGAAGCCTATGGTCTGCTGTTGTTTCGTGTAGATAAAGgAAAGGATTTCCACAATTCGAGAATCTGCGCCTTTAAACTGTTTAACTTCGAGGACGAAGATCAGGTGGCCAAAGCTAAAGATGACTGTAAGCAACACAAGTTACCCAAAACGAAAGGATGTCATCTGTATGCTGTCAGTCATACTAGTGGCAGCCAACCACTGTTCATGGGCGTGGCCTGCGGCAAAAAAGTTCTCCTGATGAAATGGAAATACCCTGTTGTATGGAACACGTCAGCAGCTGCTACTAGTGGTACACGAGAGCTTATCGAGGGGTTCGTTGTTGTCAAGGAAATAACGATGAGTGATTCCCCGCTATTGATGACAGTCACCCTAGCAGCGAACAAAGATTCCCTGTTGTGCGTCGGCTACAAGCATTTCTTCGACCTCATTCGACACACGGGGGAGACAACCAGGCTACATTCTGTTGATACACAAAAGAAAACAACTCTGGTGTCTGCTGTTGATGTGTATGAGGACGAAGAACCCGAGCTACTGCTCTCTTTTAATCATCAGTCCGTCTTCAAAAAACTCAGCGGCGAACAATCTTCAAACTTTTATTTTAACTGGAACTCAGCTCCTCGATCGATTGTCTGTGCATTTCCTTATTTATTGGCCTTCACAAACACGACCATTGAAATCCGCCTGGTTGTCAATGGCAACCTGGTCCATACGCTCGCACTTCCAAAACTCGAGTTGATAACTTCCAAGTGGGATATATACTTCGCGGCGTCGCCACCCAAAAGAACAAGTGTGTTGTCAAATGACCAAACCACCCAGTCCAATTCCTGTCCTCCTTCCCCGACGCTACCAAGAGAACATAGCTGTATATATAAGATATCATTGTATTCATTAATGGGACAATTCTTATCACCAACGCTAAAATGTTCTGAAGAATTCCCCAAAACGACAGCATTCACAGAAGAAGGAGCAGACACAGAAGATGGGCATGAAGCAGAGTCACGTGACTCGCTCGGCTCACCAGTAATCGAAGCAAATTCAACGTTGTTGCCACAAAAGGACGCTCTTTCTCGAACTCGTTCTTGCCCGATACCTGCGAGGGAAACTTTGTCGGTTTTTTCTGAGGAAGTTGAGCTGTGGAATCGACGAGGAAGCAGGGACAAGGAGGACTTTAGTCAAACTCTCAAGACGTGA

Transcript

ENSQPTT00000009161

TAAACTATAGTACGCTGCCAAGTCTATACTCCTGAATTTTGAACATTTATCACAAAGTTCTGGAGTTTAATTTTGCGCTATTTACGTTGGGGATCGCTTGTCGAATCAACAGTAATTTTGGTTTTCTGCCCACTTGAATGGGGACATAATTTATACATGGTTTATTTGCGGTTTTGATCATATATCTGGAAGTGGGTAGATAAACGCGTGGTTTCATACAACGTGTATCGATCAAAGAAGCCATAACGCGAAAAAAAACACAGAATATTGACACAGTTAGAACTGCTGTCTGATCAAAGATGGCCGCCAGTCGACGACCCAGAGCCTCAACATTTTCAACCTTCAGTGTTCCATCTCCTGATGTTGGTAGGAGACCAGGATTGAGTAGAAGACATTACTATGGCTCCCTGGAAACTCTGAACACGGCGAATGGTAACTACGAAACGTCTGGAGTAACGCCGAAGTTTCGCATCGAAAGCGGAGAAATCGGAGGCCTGCAGAACGGAAGTCCAACTTCGAGTCAGGGAAGTGTGGTTCATTTGGAAAACCCTGAGTTCCAAACACGATGGTACTTCAAGTACTACTTGGGCAAAGTTCATCAAAACTACATTGGTGTGGATGGCAAACAGAATCCTTTTATATTATCAATATGCCTAACAGCAGCAGATAACTACGATGTACCACAGTACAGAGCGATCTTGTGGAAGAAAACTGGCAGCGAAAAGAAATGTATTCCTTACTATGCAAACAAACCTGTTTCACCAAAAGTCATTATCCAATCGTTTGGTATCGAGAAGTGTGAAAAAGGACCAAAAGAGGTTCTCAGTCCAGAATTTCAACAGGAGCTTTTAACGCTTGAAGAACAAGAGGGATCAGTGAATTTTAAGTTTGGAGTGTTGTACGCTAAAGCAGGACAGACCAGCGATGATGAGATGTTTAGTAATGAAACTGGTAGCGAGGATTTTGATAATTTCCTGGACTTACTTGGTGATAGAATCCCTTTACGGGGCTGGCAGGGATACCGTGGTGGACTCGATGTTAAAAACGACATGACAGGCTCACAGTCAGTCTTCACAGTGTACGAAGGACACGAGATAATGTTCCATGTGTCGTCGCTTCTTCCTTACACACCAGACAACCCCCAACAGGTTGAGCGTAAACGTCACATAGGTAACGACATAGTAACAGTTGTCTTCCAAGACACAGAAAACGAGGACGACAAACCTTCTTTTACTCCACTCGGAGTGAAATCTAAATTTATTCATGTATTTGTATTGGTGACTTATATTAAGTCGGATGATAGTTATAGAGTAACCATATTCACAGAAAAGAATGTCCCGATATTTGGTCCACCGCTCCCTTGTCCTACAGTCTTTCACAATCATCAGGAGTTCAGAAATTTCCTTCTTGTTAAACTTATCAACGGCGAAAAGGCCGCGTACTCCTCACCGATCTTCAGCAGCAGACGACAACGAACACTAGAGAGCCTCATAACAAGACTGTGCCAGGAACAGATGCACGAGaaaATTGGGGTTCGCAAGTCATGGGGAGATGCGATATCAGACCAGCCGAGAGGAAACAGACGAAAAGAGACAGAAAGAGAGCAGCTGTTTGTACAGTTTGGTCAGTCGCTGAAATTGAAAACTATAGTAAAAGGTGACGCCCCTACGAGCCTCATTACGACGTCAGCCAATGTCAAAGCTGAGCCATGGCAACAGCAGACCGTATATGAAGATTTCCCTCATAAAATATTGTGTGGAGATTCTTGGGGTGATGCTTTAGTTCTCGGTACCGAAAGTGGAATCTTCGTCGTACTCGGTGATAGCATTCGTCAGTTATTCGACAAGTCAGTCATCACCAAGCAGCTAAGTGTAGACGAAGCCTATGGTCTGCTGTTGTTTCGTGTAGATAAAGgAAAGGATTTCCACAATTCGAGAATCTGCGCCTTTAAACTGTTTAACTTCGAGGACGAAGATCAGGTGGCCAAAGCTAAAGATGACTGTAAGCAACACAAGTTACCCAAAACGAAAGGATGTCATCTGTATGCTGTCAGTCATACTAGTGGCAGCCAACCACTGTTCATGGGCGTGGCCTGCGGCAAAAAAGTTCTCCTGATGAAATGGAAATACCCTGTTGTATGGAACACGTCAGCAGCTGCTACTAGTGGTACACGAGAGCTTATCGAGGGGTTCGTTGTTGTCAAGGAAATAACGATGAGTGATTCCCCGCTATTGATGACAGTCACCCTAGCAGCGAACAAAGATTCCCTGTTGTGCGTCGGCTACAAGCATTTCTTCGACCTCATTCGACACACGGGGGAGACAACCAGGCTACATTCTGTTGATACACAAAAGAAAACAACTCTGGTGTCTGCTGTTGATGTGTATGAGGACGAAGAACCCGAGCTACTGCTCTCTTTTAATCATCAGTCCGTCTTCAAAAAACTCAGCGGCGAACAATCTTCAAACTTTTATTTTAACTGGAACTCAGCTCCTCGATCGATTGTCTGTGCATTTCCTTATTTATTGGCCTTCACAAACACGACCATTGAAATCCGCCTGGTTGTCAATGGCAACCTGGTCCATACGCTCGCACTTCCAAAACTCGAGTTGATAACTTCCAAGTGGGATATATACTTCGCGGCGTCGCCACCCAAAAGAACAAGTGTGTTGTCAAATGACCAAACCACCCAGTCCAATTCCTGTCCTCCTTCCCCGACGCTACCAAGAGAACATAGCTGTATATATAAGATATCATTGTATTCATTAATGGGACAATTCTTATCACCAACGCTAAAATGTTCTGAAGAATTCCCCAAAACGACAGCATTCACAGAAGAAGGAGCAGACACAGAAGATGGGCATGAAGCAGAGTCACGTGACTCGCTCGGCTCACCAGTAATCGAAGCAAATTCAACGTTGTTGCCACAAAAGGACGCTCTTTCTCGAACTCGTTCTTGCCCGATACCTGCGAGGGAAACTTTGTCGGTTTTTTCTGAGGAAGTTGAGCTGTGGAATCGACGAGGAAGCAGGGACAAGGAGGACTTTAGTCAAACTCTCAAGACGTGACCAAATGGGTATGACTTATATTCGTCGGTATATTTTGAACTTGGTTTCATCGAGGAATCTCCCGATAGGAGAAGCGGAAAGTAAAGGAATCACTATAGGTTCGTGCTAGCAGAGTTTAAATGGCCAAAGATCTGTGGCTATCGCTCTACCCACGAGAATAGAATTCCAGTTTTGAGAGTGAATACATACAGTACTCCATGTTGCCTTGTAAGACGAGGAAAGCAGTTGGATAAAACAACGCAGTTTTTATGGAGAGAAGAATTAATTTATCTGACTTGATGCAGAGGATCTAGATTCATCCTTGATTCAGTCCACAAGGATGGTTTTAAGTTGTTTCTAGCTCCGTCCGAGCGTTTTAGATTTGATGTTGACTTGTAAAACTCTTATGAAGAGAGAAGAGAAGTTGTATCTGGCTTGATGCAGAGGATCTAGATTCATTCTTGATTCATTCCACAGGGATGGTTTTAAGTTGTTTCTAGCTCCTGGCTTTTCAGACTTGATGTTGGTTCGTGAAACGACTTGTGTGAAAAATTATGTACTATTTACTCAGGTTACATTGCAGGCATTTTCTTAATTACGCGACCAGGACAACAGTCCAAAAGTTCCATTCATCCGTCAATCACATATTCGACGATCtgagcacaggcagcccaaacaaggttcctgtgtatggtttataagggaatgtatgggagttatgataacgttatgaaaataaaatgtttcactcaacaatttgcctcaaaacttgctgcagtcgttgcttttactttgttcagtcttctggcgaagtttcagcTCGATAAAGGTAGAGAAAagcggattttgaaaaaacccactaaacggcctcaaatcgcgctgaaacttcgccagaagactgaacaaagtaaaagcaacgactgcagcaagttttgaggcaaattgttgagtgaaacgttttattttcataactttatcataactcccatacattcccttataaacaatacacaggaacct

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5ZJY3	GTPase-activating Rap/Ran-GAP domain-like protein 3 OS=Gallus gallus OX=9031 GN=GARNL3 PE=2 SV=1
A5PF44	GTPase-activating Rap/Ran-GAP domain-like protein 3 OS=Danio rerio OX=7955 GN=garnl3 PE=3 SV=1
Q5VVW2	GTPase-activating Rap/Ran-GAP domain-like protein 3 OS=Homo sapiens OX=9606 GN=GARNL3 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003156 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21022 all species →	Rap-GAP_dimer	Rap/Ran-GAP protein dimerization domain	Domain	Interproscan
PF02145 all species →	Rap_GAP	Rap/ran-GAP	Family	Interproscan
PF00780 all species →	CNH	CNH domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035974 all species →	Homologous_superfamily	Rap/Ran-GAP superfamily	Interproscan
IPR000331 all species →	Domain	Rap/Ran-GAP domain	Interproscan
IPR050989 all species →	Family	Rap1/Ran GTPase-activating	Interproscan
IPR001180 all species →	Domain	Citron homology (CNH) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15711 all species →	RAP GTPASE-ACTIVATING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0051056 all species →	Biological Process	regulation of small GTPase mediated signal transduction	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0090630 all species →	Biological Process	activation of GTPase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000007357.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.