Gene detail

Detailed information of ENSQPTP00000008475.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031557885.1, mitochondrial thiamine pyrophosphate carrier-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000010546

TCAAGCTCTCGCGGGAATTCATCCTTCACTTCCGGTTGAACGGTTATTTTTTACTTCCTCTTTTTAGTCCTCCTCGGTTAGACTTTGAACGCCTGGAGTATTTTATTACAAGCGGTGAAAACATGGCGGACTTTACGTAACGAAAAAATACTTGGATTTTTGTAGTTAATTTAGCTGAATGGAATAGTGGAAAGCTTAAACGATTAATGCGAGGAGCTCCACTTGGGATTAAAGCTGTGTTTGgggattttatttttagtggGAACATTATGGAATGAGGATTTTTGGAGACCAAAAATATGGTTGGTTTTGATCCCAGCCGTGTGGAAAAAGGACTTACTTCTTCACAATGTGGATATTGTGGCTCTTTTGCTGGTGCAGTCACAAGAGTTTTTGCTCAGCCTTTGGATGTTCTTAAAATTAGATTCCAGCTTCAGGTGGAGCCAACATCTACAAACCACttgTTGATGTCGCGCAAAGGCGAAAAACCTACAGGAAAATATACTGGAGTATCGCAAGCTTTTAAACTCGTGTATAGAGAAGAAGGCATCCTAGCTCTAtgGAAAGGCCATGTTCCTGCTCAAATTTTATCCATAGCCTATGGATACTTTCAGttcacATTTTTTGAAGCTTTTACACAATTAGCATATTTCATTTCACCAAGGCTGCTGGAGCAAAGGCACAAACCaaTGACTCACTTCATATGTGGTGGAATATCGGGTTGTGCTGCTTCATTTGCCATCCAACCTTTAGACGTCATAAGAACAAGACTTGTTGCACAAGGAGAACCAAAGgtataCTCAAGCATGATAGAGGCTGCTCGCATGATGTACACCCTTGAGGGACCAACATCTTTCTACAAAGGATTGATTCCATCTTTGCTGCAGATTTTTCCTTATGCTGGTCTTCAGTTTGGGTCCTATACTTTGTTAAAGATGATTTGGGATTATACTTTTGATATCAGGATCCACGACCCCTACATGCCAGCAGATATTATAGAGAGTCTTTTCTGTGGTGCTGTTTCTGGTATGATCAGTAAAGCTGTCATACTTCCTATTGACATTGTCAAGAAGAGAATCCAGATTCAAGGTTTTGCAGTTCACGCAAGGGCGCATTTTGGGAAAGTCCCTGAATATCACAATCTCAGACACTGTGTGAGATCAATTATCAAACACGAGGGAGTTCAAGGGCTTTACAAAGGATTGGTGCCAAGCACCATAAAGGCAGCTGTATCACTCAGCATTACATTCTCTGCATATGAACAGTGTTTGCATTTTGTTCGACATCTTCTTCATAAAGATGCAGCCATCAAGGATCTTCCCCCTCCTGCCTCAAAAGCATAAAATATTATGATATAATATTAGAATAATATTATACATAATGATAGACCTCGTTTCCTTGTGAATAATGTTTccccattccattccattctatagagaataagattctttgttgcAGTTGTATCGATTCCATATAATTCATATGTCATCTCATAAACAACTGTCAAACTAGTGAATGAAATCATTACTGGAAAACATTAAagccaaggtaaagaggtctatattTTTGTTATGATTTTAAATTTCCAAGTGCTTTGCAAAATTTTATACAAAGTATACTTCATCAAGAGGAATTGAAATACTTCATTTATCATTCAGTCAGTGTTATGAGAATTTTATACCCTGATCATAATCAAAATTTACAGGGTTCAAAATAAACTTTTATAAAAAGGTCTTCCATTGGAAAACCATGATTAAGGATTTAGGCGTCAAGCAAAAATCTTGATCAGCAGTATTTCAACAATAAAAGTCGCCAGATTCAGATTCAGATCCAGATTAATTCTATTCTTGTGAATCAGAAAATAATTGACTGAAAACTGTTTGAGAAAactctttcttttattcaagAAACACTAAAACgagcttgaaaaaaaaaatgtttggtCATCTGCTGGACAACCATCTTCTGAAATTCAATAATTGTCAAATTGAAAATTCTAGTCCTCTTTGAAGACTGAACTTTGGACCCTGAAATATTCTGAATTCATGCAATGCATGCTTTTGAGTCCGAACCTTTCATTCATACAAATGCAGAAGTTTTGATTGCATTTCAAACTTTTCACTTCCACTTTTTATTTCCCACCATTTCCATTGTTCCCACTTTCCATTTCTCATTTTTCACTTCACATTTTTCAGTTTCTGCTTTCAATTTCTACTGTCTCCACTTTCTACATCCAAACatttccatttttattttcctttcccATTTCTAAACTACCATTGACATCTGGACTACTTTTCCCCAGTTCTGTGACATCAGAACTTTTACCGACTGCAAATTCA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q29RM1	Mitochondrial thiamine pyrophosphate carrier OS=Bos taurus OX=9913 GN=SLC25A19 PE=2 SV=1
Q6AYL0	Mitochondrial thiamine pyrophosphate carrier OS=Rattus norvegicus OX=10116 GN=Slc25a19 PE=2 SV=1
Q9DAM5	Mitochondrial thiamine pyrophosphate carrier OS=Mus musculus OX=10090 GN=Slc25a19 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007785 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00153 all species →	Mito_carr	Mitochondrial carrier protein	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018108 all species →	Repeat	Mitochondrial substrate/solute carrier	Interproscan
IPR002067 all species →	Family	Mitochondrial carrier protein	Interproscan
IPR023395 all species →	Homologous_superfamily	Mitochondrial carrier domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24089 all species →	SOLUTE CARRIER FAMILY 25	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0015234 all species →	Molecular Function	thiamine transmembrane transporter activity	Interproscan
GO:0030974 all species →	Biological Process	thiamine pyrophosphate transmembrane transport	Interproscan
GO:0031305 all species →	Cellular Component	obsolete integral component of mitochondrial inner membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15108	SLC25A19, DNC, TPC1; solute carrier family 25 (mitochondrial thiamine pyrophosphate transporter), member 19	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.