Gene detail

Detailed information of ENSQPTP00000008478.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031566653.1, uncharacterized protein LOC116301698 [Actinia tenebrosa]
Species Actinia mediterranea · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000010550

GAAAgcaagttttcaaaatatgaaGACGGCGGCGAAAAACCAGGTTCAAAAACTTGCCCTAAGACAGgTTTGTGGGAGTTTGCAGCCGTTTTCGCGCTCAAATCCTGTTCGCTTGTTCACCAAATATTCCCAAAAATGCTGCTTCAAACTTAGCGACATTTTGGataaaaaaggagaaatacGAGATGGGCATGTTATTTTAGGGTTCACGAAAGATGGCACACATCTTATATCTTACAGTTTGGTAATAGTTACGAGGCTTGAGTTGCCGCAACCTGTTTATACATATACCCTACACTGGTGGAGATTCCAGTATTCTAAACCTCTTTTCAAGGTCCAGAGTGCTACTTTGTTTTATGACCATCCTATCTCCCATGCTCTCCACCTCATTGTGTCACAGAGTCCAGATGAAAAACAAGTCATTGTATGGGGTAGAGGTCCAACAAGTAAAGAAGAACAGACTTGCAGATGTTATGTAACTGTTTGTGCTGCTCCACCAAACAAACCATGTGATAAGTGCAAAGCATATTCAAACAAGCCATGCCACGAACATTCATATTCTGCTCATATTATGTATGATTCACTTCCTCCTTATCCAGTCTTCTTACCTTCTATTTGTCTACAAATTCCCGGTACCGTGTTCTTCAATTCTGGGGATTCTTTGATTGCCTTTAAGTGTGTTCCATGTGTTAATGATTTTGAAGTCGAGAATGCAATTcatgaatttaaaaattcaCATCAACTGCCAGGAGATTTATCTGGACATGGGCCAAGCGAGGTTGAAGAAATCCCAACCATACAAAAACAGATGGTGAGCGACGACAATAAAGACACTGACTGCATAAATTTGAGGGAAGGGAACAAAGAAGATGTTGATTATGGCAACGGAGATGAGCCATGTAAGACAAAAAAGGACAGTATTTGTGAACTAGAGAGTTTGACAACAGGACTAATCATAGAACAACATGATAAAAATAGGAATCGTACACCACCACTGGTCCCTAGTGTTTccccatggtcatcattaatGCCGTCACCAAATACATCACCCATGTCATCCTTTGGAACTATACTGAGCACCACAGAATCTCGACTTAGTTGTGATTCCCTTACGACATATTCATATCGTAAGTTTACTACTCCATGTGACGTACAGGATAATTCATTTGACACATCTGATGAAACGGTTGAAGTACCAGCCTTGGTAATGCATGGTACGCAAGAACTAGAAAGTGTCATATACTCAGAACACAAAGGGCCAAATTCATCTAGTGGACCTTCAATTTTGGTCTGTCAGGCATTGCTAGATATGGAACAGTGTATCAGTGAACTCATCGCATCCAATGAGGACTTGTACCACAGGTATAAATCATTACGGGATTATGATTGTCAGTTTTTAGGTGTTTGTGAAGATACTGGTGATGTAATAGTGATGGTGAAGATACTCATGTTTGCTAAACCAACTAGAAGTTCTCTGTCTGATGGCCTTCAAGTTAGCCCAAGCCCTCTACTCCAGCAAACTGGATTTGTCTTTTCCTGGAATGTGTGGAATGGTACTTTACAGACTCTATACTGTCTGGAAACACAAGACCACCCACAGGGAAAGAGCCTGTCAAGATCTGAGTCAACCGTAGAATATGCAAGGTCTTTAAGGCAAGGCACCACGGTTCCTGTAGGCTTTTCATCTCAAGTTCGAGTGTTTTCTAACTACACTGTTTTCACCGAGAAATCCTTGAAGTATCTTCTTCATCCTTTTTtgcctattattattattctgtGAGCGATTATGGTTTTCTTAGGCTTCTAAAAAttatgtagatgtagatgttCATTTACTTGCAGAATATTTCTTTTCATATTGTGTTGTTTCACGATACTTAAATCATAAGGTATAAGAAACCATAAATGCAGTTCTGATCCACTTCTGGataaattcattcattcaactAACTCTCAAGCCTCCGATGGTGCCAAGGGAGGCAACCAGAGTAGGAACGACTGTACCAGTGCCGCACTTCAATTTTATTAACTATACAACAAGAATTAATGacaaattttataaaagaaagcaTTTTAATTCTAAATCACCAACAACACCAAGAATTTACGGACTAAAATTTGCACAGTTAACATTCTACATCATTAATTTTTGTATGAAAAATTGTGTTATCTTACCGATGCAATTTTATATTATGTAgcattattaatatattcttAAGGACAATAATGTTTATAATTGCTACTGGtgcttgatttgttttagtactttaaataaattattccaTTTGTATTGTTTTGAATTGAAGTGTTTTACATTTTCCCTCACAGAAACAGTttaattgcttactatcaatcatgtgactttttggagttgactggggggcaaacaagcggttgactgaggggcaactagcggatgctaagtcaaaacaaatcaaaatatttaaactaTCGTATTTGACTactttcacgacatcaaaccagaaaacaagagatcaaaaca

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006453 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14939 all species →	DCAF15_WD40	DDB1-and CUL4-substrate receptor 15, WD repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038914 all species →	Family	DDB1- and CUL4-associated factor 15	Interproscan
IPR032734 all species →	Domain	DDB1- and CUL4-associated factor 15, WD40 repeat-containing domain	Interproscan
IPR047319 all species →	Domain	DDB1- and CUL4-associated factor 15, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR28541 all species →	DDB1- AND CUL4-ASSOCIATED FACTOR 15	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016567 all species →	Biological Process	protein ubiquitination	Interproscan
GO:0080008 all species →	Cellular Component	Cul4-RING E3 ubiquitin ligase complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11791	DCAF15; DDB1- and CUL4-associated factor 15	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.