Gene detail

Detailed information of ENSQPTP00000008652.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031556171.1, dynein assembly factor 5, axonemal-like [Actinia tenebrosa]
Species Actinia mediterranea · all data for this species · gene families

Sequence

CDS

ENSQPTT00000010770

ATGAAGCTGTCATTCCCAGTCCTTTGGAAAACGCGCGGGCGAAGAGTTTTTAAAATGGCGGCAGTTTTGAGTCCTTCAGACACAGAAGACTTTGAAGTCGTTTTGCAGGTAACTCAAAGAGATATTAACTGTTTGTCTGATGACAATAGAACAACACGACGTAGGGCATTAGATAAAATTCTCAAAGATGTCCTACAAAGAAAGCCCCCACTATCTGCACAAGTCCTGCAGAGTTTGTTGGATGAGCTGGTCAAACCTCTGCTGAAAGTCATGTCTGACCCAACTGAAAAGTGTAGGGACTTGTCAGTACAAATAATGTCAGAATTTGCTGATAAAATTGTAGACGTATCTGTGTTTCTTCCATACATTATTCCCACCATAAGTCAGCGTCTTGGCCAACCTGAAATTGTAGAAAATTGTGAGGAATTAAGGCTCGCTTTGGTGAAATTATTGACAACTGTGACAAAACTAtgtcaaaacaaaatggcagtCTATATTGATGATATGATAAAAATATTCCAGAGGACAAATCTGGACCCATTTCATGAAGTGAGAAAGGAAAGTTTCAAGTGTATTAATGTGTTGGCTCCTGCAATACCAGAGCAGTTCTACTTTCAAGGGAATTCTTTGGTCAGCTCTTTGTTAAAAACAATAAGTCATCAGCACTCTAAAGTCAGAGTAGCCTGCATTCAGACAATTGGAGTAGTAATACAGTATGGTGATGGTAAGAATGTAGATGATGTTACATCTCATTTAGCACAGAGGACATTTGACTCATCACCTACTGTTAGAGCAATGGTTACATCAGTAGTTGGTGACTGGCTCCTGAACCTTAGAGACAGATATTCTTATTTTCATAAACTTCTTCCATATTTATTGACTGGGTTATCAGATGAGATGCCAGATATTAGAAATAAATCAAGAGAATTAATGGACCAGGTGGGAGATTTGTATgctaaagaaaatgaagaagaacTGAAGGATAAGATTAATTTTGATGAGCCTCCCACATACAGACTGATAACAGACATTCCCAGACCAAGTCTAGGCTGCAGAATCCTCATCCACCGAAACCTCTCCAAGATCCTCCCAGCTGCTCTCAGAGATATGACAGACTGGACTGTAGacacaagaaaaaaagcaTCCGCATTGGTGTACAATTTACTATTCTATGCTGAGGACAATACGACTCAGCACATGGAGATTCTCTTGAATGGCTTGTATAAAGGGTGTCAGGATGAAGAAAAGGAAGTGGTCAGCCAGGTTATTGCCAGTGCAGAATTGGCAGGTAGCTTTGTAGATCCTGCTGTATTTTGTAAGCTTGCTCTTCCTCATCTCAAGACATCAGCTACCTCTTCGTCACAGTCATGTACAAACTGCCTTACAATATTAGCAGCTCTTATCCATGGATGTAACCCTGAGCTACTTGTTCCACAACTTCAGtatATCTGTGAAACCATTTGCCTGCCTGAGGTCTCCTGTGCAGAACAGCAATCCACCCAGCAGCAACTCCTCATCCTCGTCAATGCTGTACTACAAAAGGCTGGCACACACTGCACCCAATATAGCTATCAGTTGTTCACAGTCATAATGCACGTGAAGGCTTTACAGACCCAGTCAGGACTGGAAGAGGAGGTCATGGCTTCCCTGCAGATGCTAGCTACTATACAAAACCTGCAGAATATACAACAGCTGTATGAAAAACACAGTAAAGAACTATTAACTAAGCTTAAGGCAAGCCACATGTCATGGACCAGTCACTCACCTGAAAGACAACTCTTTGATGTGTTACTTACAAACGCAGGACCTGTAACTGGACAAGTGCTGCTGGCTGATGCTATGCCTATATTTGCATCTTGTTTTGATATAAATAGAGACCCAGAAATGAGATTGAGAACCTTCTCACTAATGTCCAGATTAGTGATGGATGCCTCTAAATCTGAAGTGTCCATAGATGCATTTAAAGGATATTCACTTGCAATAGTTAAAGATATGATCATTCCTAACTGTGTTTGGCAAACAGGAAGAACCGCTTCAGCAGTGAGAGCAGCAGCTGTCTCGTGTCTATGGGCTGTACTGCAAGCAGGTTTACTGACTGATCAACAAGCTAAAGATATCATGAAAGAACTGCTAACACAGCTCAACACTTGTTTGGACGACCACAATCAAACCACTAGGCTAGTTTCATGCAAAGCATTACAGAAACTTCTCATTTCCTGTAAAGATTCCTTCAATGCTGACACTCTCCATCAAATTTATCCCGAACTGACGAAAAGAATGGACGACAGCAGCGATGAAATCCGTATCATGGTCACCAAGACATTCCTTGCATTCTTTAGAGCCTTTCCTGCTGACTATGATCGAGATCTTTACAAGTTCCACTTGCAGTCCATGTTTAAGGGCTTATTAATACATCTAGACGATCCTACCGCTAGTATTCAAGAAAGTGTTCTTGCTGCGCTACTTGAGGCAGTTCATATTGCACCGAATATTTTACAAGAGCAAGTTGAAGCTGTAAAACACAAGCACAGAGTGGCAAGGTTTTGTAATGAAATTCTAAAGGAAATCCAGTCCCACACAGCCATGGAGCATTAA

Transcript

ENSQPTT00000010770

ATCCAAACTATTGTCTAATTATTTTTCCTAATTTGGTCAAAAAAATCCTGTTGCTTTTAGACTTACTCAAATTTATTTCCTAGGAAATTCTTATCTTAGGTGCGAGAAAAATTAATAGAATTTGAAACTGGAGAagaaaaactaataaaaattACATAGAAATGCTGATGGTTTGTGGGTAATGAAGCTGTCATTCCCAGTCCTTTGGAAAACGCGCGGGCGAAGAGTTTTTAAAATGGCGGCAGTTTTGAGTCCTTCAGACACAGAAGACTTTGAAGTCGTTTTGCAGGTAACTCAAAGAGATATTAACTGTTTGTCTGATGACAATAGAACAACACGACGTAGGGCATTAGATAAAATTCTCAAAGATGTCCTACAAAGAAAGCCCCCACTATCTGCACAAGTCCTGCAGAGTTTGTTGGATGAGCTGGTCAAACCTCTGCTGAAAGTCATGTCTGACCCAACTGAAAAGTGTAGGGACTTGTCAGTACAAATAATGTCAGAATTTGCTGATAAAATTGTAGACGTATCTGTGTTTCTTCCATACATTATTCCCACCATAAGTCAGCGTCTTGGCCAACCTGAAATTGTAGAAAATTGTGAGGAATTAAGGCTCGCTTTGGTGAAATTATTGACAACTGTGACAAAACTAtgtcaaaacaaaatggcagtCTATATTGATGATATGATAAAAATATTCCAGAGGACAAATCTGGACCCATTTCATGAAGTGAGAAAGGAAAGTTTCAAGTGTATTAATGTGTTGGCTCCTGCAATACCAGAGCAGTTCTACTTTCAAGGGAATTCTTTGGTCAGCTCTTTGTTAAAAACAATAAGTCATCAGCACTCTAAAGTCAGAGTAGCCTGCATTCAGACAATTGGAGTAGTAATACAGTATGGTGATGGTAAGAATGTAGATGATGTTACATCTCATTTAGCACAGAGGACATTTGACTCATCACCTACTGTTAGAGCAATGGTTACATCAGTAGTTGGTGACTGGCTCCTGAACCTTAGAGACAGATATTCTTATTTTCATAAACTTCTTCCATATTTATTGACTGGGTTATCAGATGAGATGCCAGATATTAGAAATAAATCAAGAGAATTAATGGACCAGGTGGGAGATTTGTATgctaaagaaaatgaagaagaacTGAAGGATAAGATTAATTTTGATGAGCCTCCCACATACAGACTGATAACAGACATTCCCAGACCAAGTCTAGGCTGCAGAATCCTCATCCACCGAAACCTCTCCAAGATCCTCCCAGCTGCTCTCAGAGATATGACAGACTGGACTGTAGacacaagaaaaaaagcaTCCGCATTGGTGTACAATTTACTATTCTATGCTGAGGACAATACGACTCAGCACATGGAGATTCTCTTGAATGGCTTGTATAAAGGGTGTCAGGATGAAGAAAAGGAAGTGGTCAGCCAGGTTATTGCCAGTGCAGAATTGGCAGGTAGCTTTGTAGATCCTGCTGTATTTTGTAAGCTTGCTCTTCCTCATCTCAAGACATCAGCTACCTCTTCGTCACAGTCATGTACAAACTGCCTTACAATATTAGCAGCTCTTATCCATGGATGTAACCCTGAGCTACTTGTTCCACAACTTCAGtatATCTGTGAAACCATTTGCCTGCCTGAGGTCTCCTGTGCAGAACAGCAATCCACCCAGCAGCAACTCCTCATCCTCGTCAATGCTGTACTACAAAAGGCTGGCACACACTGCACCCAATATAGCTATCAGTTGTTCACAGTCATAATGCACGTGAAGGCTTTACAGACCCAGTCAGGACTGGAAGAGGAGGTCATGGCTTCCCTGCAGATGCTAGCTACTATACAAAACCTGCAGAATATACAACAGCTGTATGAAAAACACAGTAAAGAACTATTAACTAAGCTTAAGGCAAGCCACATGTCATGGACCAGTCACTCACCTGAAAGACAACTCTTTGATGTGTTACTTACAAACGCAGGACCTGTAACTGGACAAGTGCTGCTGGCTGATGCTATGCCTATATTTGCATCTTGTTTTGATATAAATAGAGACCCAGAAATGAGATTGAGAACCTTCTCACTAATGTCCAGATTAGTGATGGATGCCTCTAAATCTGAAGTGTCCATAGATGCATTTAAAGGATATTCACTTGCAATAGTTAAAGATATGATCATTCCTAACTGTGTTTGGCAAACAGGAAGAACCGCTTCAGCAGTGAGAGCAGCAGCTGTCTCGTGTCTATGGGCTGTACTGCAAGCAGGTTTACTGACTGATCAACAAGCTAAAGATATCATGAAAGAACTGCTAACACAGCTCAACACTTGTTTGGACGACCACAATCAAACCACTAGGCTAGTTTCATGCAAAGCATTACAGAAACTTCTCATTTCCTGTAAAGATTCCTTCAATGCTGACACTCTCCATCAAATTTATCCCGAACTGACGAAAAGAATGGACGACAGCAGCGATGAAATCCGTATCATGGTCACCAAGACATTCCTTGCATTCTTTAGAGCCTTTCCTGCTGACTATGATCGAGATCTTTACAAGTTCCACTTGCAGTCCATGTTTAAGGGCTTATTAATACATCTAGACGATCCTACCGCTAGTATTCAAGAAAGTGTTCTTGCTGCGCTACTTGAGGCAGTTCATATTGCACCGAATATTTTACAAGAGCAAGTTGAAGCTGTAAAACACAAGCACAGAGTGGCAAGGTTTTGTAATGAAATTCTAAAGGAAATCCAGTCCCACACAGCCATGGAGCATTAAGATAACCATTACATGTTTTACCATATGTAGCAATGAGAAtgtcttgcaattttttttaatttaatgtaAAATACTTAAGAGTGACAATAATAATGGAGGTTCTTATCTAtatgttgaaatatatttgtttgCAACATATAATATATTGTGACATATATTGTGACAGGGGCATTGTGACTCTTAGGGGCACTTTGATAGGTTGGGCCTGTGAAATGTAGGGGCACTTTGTCATGTTGGACCTGTGACATGTAGGGGTACTTTGTCATGTTGGACCTGTGACATGTAGGGGTACTTTGTCATGTTGGACCTGTGACATGTAGGGGTACTTTGTCATGTTTGGCCTGTGACATGTAGGAGCACTTTGTCATGTTGGACCTGTGAC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A0JMW2	Dynein axonemal assembly factor 5 OS=Xenopus laevis OX=8355 GN=dnaaf5 PE=2 SV=1
B9EJR8	Dynein axonemal assembly factor 5 OS=Mus musculus OX=10090 GN=Dnaaf5 PE=1 SV=1
Q86Y56	Dynein axonemal assembly factor 5 OS=Homo sapiens OX=9606 GN=DNAAF5 PE=1 SV=4

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004916 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20168 all species →	PDS5	Sister chromatid cohesion protein PDS5 protein	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR021133 all species →	Repeat	HEAT, type 2	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR052623 all species →	Family	Dynein Axonemal Assembly Factor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16216 all species →	DYNEIN ASSEMBLY FACTOR 5, AXONEMAL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003341 all species →	Biological Process	cilium movement	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0036158 all species →	Biological Process	outer dynein arm assembly	Interproscan
GO:0036159 all species →	Biological Process	inner dynein arm assembly	Interproscan
GO:0045505 all species →	Molecular Function	dynein intermediate chain binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19759	DNAAF5; dynein axonemal assembly factor 5	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.