Gene detail

Detailed information of ENSQPTP00000011106.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031558380.1, deoxyribonuclease-1-like, partial [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000013632

ATGGAGCTCAGTCGTCAGAGTTTAAGTGAGCTTCCAAAAGGACCATTTACGGCTACAAAATTGTGGAACGAAATAGTTTCTCAACTAAAAGTTAACCTGCAAGTAAAGAGACGAAGATGGAGAATGAAACAATACGATGATGTATTTGTAGCTTCTGAAGCCGTAGACTGGTTACATGATTATCTCAAAGAGAACCCAAATTTTGGCCCGTCAGTGAACAGACAACAAGCTATTCAACTCTGCCAGAAATTTTTGTCTCACAAAATCATTGTAGACGCCAGGGGAAAAGGCTTTAACACTGTATTTGAGGATAACAGTCATCTCTATAGATTCGCGGATATTCGATATTCTCCTTATAAGAGAGGGAATGATTCATCAAGGGTGTCTTTGAACTCTGAGAAGAGGACTCTATGTAAAACACAGAGCTGTGATGTGTCTTCTAGTCTTAATGAAAGTCCTAAGTTTGTGAGAAGATCATTTCGTAGTAGTTTTACAAAGATAGCCTTCTCGCATGCTCCCTCTCGAACCCCTCTTGGCCCTATCACCAATAAGATGAACAATATAGGATCAATAAAGAGCGATTCTAGAGGTGCTGTTAGTGGAGGAATCAAAAAGAAACTAATCAGGAGGGAGAGTAGTGGTGATGTCATTATGAACCCTTCTGCACTCGGTTTTCAAACCAATCGTCGTAGTTTGACAGAGAAAGAGATCAATGAAATATGGTGGGACATCACTGTGAcacgTGTGTCTAGTCTACTAGAAATGAAATGTTCCCCAGAGGATTTCAAGGGAGATGATTATGACATTGAATGTGTCAGGGAAAATGCTGAGCAGCAAGGCATCTGCAAAGATTACCCGCGATCTCTCGCGAATCGCTGGTTAAGGAAAAGACTCGGTCCCAAGACCGTCCAAGACAGGAAGCGAAGCGATAATGTTCCACTGGTCAAACGGTTACTCCCCAGCGGTACTTTCAACAACCTGAAGATTGCGTCATTCAACGTTCGAATCTTTGGAAAGAATAAGATGTCTAAACCAGATGTTGTAAACACTTTGGTGAAAATTATCTTGCGGTATGACATCGTTCTTATCATGGAGATTCGCGATAATACTAAGACAGCCATTGACGACCTACTGAATCAAGTCAATGGAGCACCGAGTGCCACATCAAGAAGATCGCTTAAGAGGAAGGTCAACAATGTGTACGAAAAGATTGTCAGTCCTCGTCTGGGGCGAACAGCGAGTAAAGAGCAGTACGCCTTCTTCTACAGGACTGACATGGTCTCTGTAAATCGTTCGTATGTCTATGATGACGGAGATGAAAGCAAGTACCAGGATACTTTTGAACGCGAACCATTTGTTGTTCAGTTCCACTCAACCAGCACAAAGTTAACAGACTTTGTACTTGTTGGAATACACACTTCTCCGTTATCAGCACCAGCTGAAATCGACGCCCTCGTTGATGTCtacgatgacgtcatatcTAAATGGTCCATGAATGACGTCATTATTCTAGGTGACTTGAACGCTGCGTGTAGTTACATGTCGGATTCTGATTGGAAGAAAAACAGATTGTTTAACGACAAGAGGTTTACGTGGCTCATTGATGACTGCATAGACACAACCGTTGGAGGGAGCACATGCGCGTATGACAGGTTCGTTAGCGCAGGCTCAGCTGTGAACGCAGCGGTTGTTCCTGAAACGGCTAGTAGATTAAAGTTCGACTCCGAGTACAACATTACAAATGACTTGGCACTAAAAGTAAGCGACCACTATCCAATTGAAATAAATCTCGTCAGTAAAGGGTTTTCAGATGCACTCCAGTCTGTCCGAGAGAGCGTTGAGTACAAGTTTTATCCCAACAATCCTCCAAGGCTAACATACCATTCCATCTATCGTATTGCCCATTCTTCTAATCCACTCTTATCACTTGGCTTTGTCAGTGAGACCTCTAAGTCACCTTCTGGAGCCATTGCTGTAATCACAAACTCCAAGAAAGTGACCTCCGACCGGGAGGCATCGCAGGCACTCTCTCTGATTTATCTTCATTGGAAAAATCTTTTGAAGATAGATCAAGTAGATTTGGCATTGTATAAGGTGGTTAATAAGAAATTTCATAAGGATTCGTTGACTTCAGCCGTCGTGAAATTGGTTTGTAGAAAAATACCTACTCCAGTGGAATGCTGGGTAGCGTTGGAGATGTAA

Transcript

ENSQPTT00000013632

GGAATCTTGCAGCAGGTTTTTTGATGAAGTCGATGAAAATTGCACTAGTTCACTCAAATACAACCAAAAAACTTACATGAATAGCTCAACTACAAGCTTTTTTAATGGAGCTCAGTCGTCAGAGTTTAAGTGAGCTTCCAAAAGGACCATTTACGGCTACAAAATTGTGGAACGAAATAGTTTCTCAACTAAAAGTTAACCTGCAAGTAAAGAGACGAAGATGGAGAATGAAACAATACGATGATGTATTTGTAGCTTCTGAAGCCGTAGACTGGTTACATGATTATCTCAAAGAGAACCCAAATTTTGGCCCGTCAGTGAACAGACAACAAGCTATTCAACTCTGCCAGAAATTTTTGTCTCACAAAATCATTGTAGACGCCAGGGGAAAAGGCTTTAACACTGTATTTGAGGATAACAGTCATCTCTATAGATTCGCGGATATTCGATATTCTCCTTATAAGAGAGGGAATGATTCATCAAGGGTGTCTTTGAACTCTGAGAAGAGGACTCTATGTAAAACACAGAGCTGTGATGTGTCTTCTAGTCTTAATGAAAGTCCTAAGTTTGTGAGAAGATCATTTCGTAGTAGTTTTACAAAGATAGCCTTCTCGCATGCTCCCTCTCGAACCCCTCTTGGCCCTATCACCAATAAGATGAACAATATAGGATCAATAAAGAGCGATTCTAGAGGTGCTGTTAGTGGAGGAATCAAAAAGAAACTAATCAGGAGGGAGAGTAGTGGTGATGTCATTATGAACCCTTCTGCACTCGGTTTTCAAACCAATCGTCGTAGTTTGACAGAGAAAGAGATCAATGAAATATGGTGGGACATCACTGTGAcacgTGTGTCTAGTCTACTAGAAATGAAATGTTCCCCAGAGGATTTCAAGGGAGATGATTATGACATTGAATGTGTCAGGGAAAATGCTGAGCAGCAAGGCATCTGCAAAGATTACCCGCGATCTCTCGCGAATCGCTGGTTAAGGAAAAGACTCGGTCCCAAGACCGTCCAAGACAGGAAGCGAAGCGATAATGTTCCACTGGTCAAACGGTTACTCCCCAGCGGTACTTTCAACAACCTGAAGATTGCGTCATTCAACGTTCGAATCTTTGGAAAGAATAAGATGTCTAAACCAGATGTTGTAAACACTTTGGTGAAAATTATCTTGCGGTATGACATCGTTCTTATCATGGAGATTCGCGATAATACTAAGACAGCCATTGACGACCTACTGAATCAAGTCAATGGAGCACCGAGTGCCACATCAAGAAGATCGCTTAAGAGGAAGGTCAACAATGTGTACGAAAAGATTGTCAGTCCTCGTCTGGGGCGAACAGCGAGTAAAGAGCAGTACGCCTTCTTCTACAGGACTGACATGGTCTCTGTAAATCGTTCGTATGTCTATGATGACGGAGATGAAAGCAAGTACCAGGATACTTTTGAACGCGAACCATTTGTTGTTCAGTTCCACTCAACCAGCACAAAGTTAACAGACTTTGTACTTGTTGGAATACACACTTCTCCGTTATCAGCACCAGCTGAAATCGACGCCCTCGTTGATGTCtacgatgacgtcatatcTAAATGGTCCATGAATGACGTCATTATTCTAGGTGACTTGAACGCTGCGTGTAGTTACATGTCGGATTCTGATTGGAAGAAAAACAGATTGTTTAACGACAAGAGGTTTACGTGGCTCATTGATGACTGCATAGACACAACCGTTGGAGGGAGCACATGCGCGTATGACAGGTTCGTTAGCGCAGGCTCAGCTGTGAACGCAGCGGTTGTTCCTGAAACGGCTAGTAGATTAAAGTTCGACTCCGAGTACAACATTACAAATGACTTGGCACTAAAAGTAAGCGACCACTATCCAATTGAAATAAATCTCGTCAGTAAAGGGTTTTCAGATGCACTCCAGTCTGTCCGAGAGAGCGTTGAGTACAAGTTTTATCCCAACAATCCTCCAAGGCTAACATACCATTCCATCTATCGTATTGCCCATTCTTCTAATCCACTCTTATCACTTGGCTTTGTCAGTGAGACCTCTAAGTCACCTTCTGGAGCCATTGCTGTAATCACAAACTCCAAGAAAGTGACCTCCGACCGGGAGGCATCGCAGGCACTCTCTCTGATTTATCTTCATTGGAAAAATCTTTTGAAGATAGATCAAGTAGATTTGGCATTGTATAAGGTGGTTAATAAGAAATTTCATAAGGATTCGTTGACTTCAGCCGTCGTGAAATTGGTTTGTAGAAAAATACCTACTCCAGTGGAATGCTGGGTAGCGTTGGAGATGTAATGAAAAGGAGTCAAATTTTCATTACCCTTCCCCCCTTAGTCATAAATGAAGTATAACATTAGTAGCTGAATGATGATTTTAGAATtttaaacaaacatttatcatTCAGCTTTAATTAAGATAAAACAACCAAATTCatgaataaaattatatatgGTATAAAAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P00639	Deoxyribonuclease-1 OS=Bos taurus OX=9913 GN=DNASE1 PE=1 SV=3
P11936	Deoxyribonuclease-1 OS=Sus scrofa OX=9823 GN=DNASE1 PE=1 SV=2
O18998	Deoxyribonuclease-1 OS=Oryctolagus cuniculus OX=9986 GN=DNASE1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001730 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03372 all species →	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan
PF00610 all species →	DEP	Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005135 all species →	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR000591 all species →	Domain	DEP domain	Interproscan
IPR036390 all species →	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR036691 all species →	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR016202 all species →	Family	Deoxyribonuclease I	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11371 all species →	DEOXYRIBONUCLEASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000737 all species →	Biological Process	obsolete DNA catabolic process, endonucleolytic	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0004530 all species →	Molecular Function	deoxyribonuclease I activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006308 all species →	Biological Process	DNA catabolic process	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan
GO:0004536 all species →	Molecular Function	DNA nuclease activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000011106.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.