Gene detail

Detailed information of ENSQPTP00000012311.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031564435.1, polyhomeotic-like protein 2 [Actinia tenebrosa]
Species Actinia mediterranea · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000015141

GGACAACACGttttttcaagtcttttttcttttgagttCAAAAACTGTATCAAAAAAATACTCCCAAAAACCTCTTTTCCGTAAAATTCTAACCTTCAAAACCGTTCACAGTCCTCATAGGACATCTTTATTTCTCCCTTTAACAAATACCGTCAATATTCGCCATGTTTAGTATGTAATTGTGGTATAAAAGGAATGGAAATGGTGGCCTTTTCGACTCCATACGACCAACTTAACAGACAAGACAGGCAAGCAAACAAGGCGAATATCTCAGCACATCGCGTCCTTACTCATGTAGTTGAGGGCTTTATTATTCAAGAAAGTAACTTTCCTTTTACGGCTGATGACGATGAAGAAGATTACGACCCTCTTCACAACAGTAACCATGATCACAACGGAGACATTGATATGGAGACTGGTAGTGAAGCCCACAGCCCACTAAGCATTGACGAAAGCAATGATGTATTCTATGAATCCAATTACCTTCCTGGCCACTGTGAACAGTGTGGTAATGTCACAGAGATCCACCATCAACGTGGACCAAGGAGGTTTTGTTCTACTTCATGTGCGCGCCGATACAGTGTTAGCTGCTCACGTAAGATGATGGCTTATCATGCACGGATGAAAAGTCCACGAGGGAGACAACCAAGTACTAATAATATCACTGGTGTGCAAGGACACAGAAAAGCTTTACATTCCACATCTAGAATAAACATTGATCATGGATTTGAACCATCCACGGTTAACGCTGCAGTACAAGTCAATGAATTTGATGTTCCTAGTATGCACTTTGATTGGACTCGAGGCGAAGTTGAACCCCTTTGGATATACGAACACGTGGAGGAGGCCAAGTGGGATGTAGAACAAGTCGCGAATTATATAAGGTCTTTAACCGGATGCGAAGAATACGCCGATGCATTTGTTACAGAAGAGATAGACGGTCAAGCACTGATGCTACTGAGAGAAGAACACATGGTCGTTGCCTTGAAGATGAAACTCGGCCCCGCTCTTAAAATCGTTGCCAAAGTTAACGCTATGAAAAGAGAAGCCTACAAGAAGCTCACAAATTAAGTTGCAGGAAACTAGAGGAGCCATCTGGTTCAACACTAATACCTTTTAATGTTATgtcggccattttgaaaagtaACCAAGCTTCGTTATGAGAGTAAAGGGATCGACTTAGCATTAATAATGcttcttaatattttttttattaaaagctTAGCCTTACGGACTCGtgtttaaaatttagaattatatatatttttagtaaaaatacacaggtgattattgaaaatctcgcacgctgattggtcgaaaaacccacactatcacacgataatcaccttcagcgataatccaaaatggcggccagccgctttgttgctgttactggaaaaaaatgtcgtttatctcctttttttcttttttttgaaagaatcacctgtgtatttatactaaaacaattatttgcctcagcctcagtgaatatcggagaatatttacctcgccgctcgaagactcgcgtatCGGTAAATATACCCGGTTATTCACTTCGCTTTCgccgaataattgttaaatatatatatatgatccAAAGGCACTCATATGTTGCACCCATTTTAAAACTCCAAAACCGTTTTGCGGGCTTCCTGTACTCATAActacacaggaatcccgcatcGTGGTTGGTTCTATTTCAAAATGGCCTCCATGTTTTTAAAAGGTAGTTGTTATTATATTCAAAAAGTTATTATTCAAATACGTCTCATTAgattttaattattatcttTGCAGGATAAAACACAGATTAGTGTAAAAGGTATCCGTTGCGTAGGTTTTCCTTTGCTCAGCAAGCTGGTAATATTTTGGACCAGAATGCTCTTCCCCCTAATTTACCTGGATTTACCACTATGGTGGCCGGGTTTTGCAACCCACTCGATAACGTTGCCGATAGGTCGAATTAAAATTCGGATCTTCTTGGAAACTCTTTCGATAATTTTATAATCCTAATAAATAATCATTCATTCCAGTAGCAGATATTGCAGTATTTTGACATTCAAAAGAGGC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P78364	Polyhomeotic-like protein 1 OS=Homo sapiens OX=9606 GN=PHC1 PE=1 SV=3
Q64028	Polyhomeotic-like protein 1 OS=Mus musculus OX=10090 GN=Phc1 PE=1 SV=3
Q8QHL5	Polyhomeotic-like protein 2 OS=Danio rerio OX=7955 GN=phc2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002925 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00536 all species →	SAM_1	SAM domain (Sterile alpha motif)	Domain	Interproscan
PF21319 all species →	zf-FCS_1	Zinc finger, FCS-type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013761 all species →	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR001660 all species →	Domain	Sterile alpha motif domain	Interproscan
IPR038603 all species →	Homologous_superfamily	FCS-type zinc finger superfamily	Interproscan
IPR050548 all species →	Family	Polycomb group and chromatin remodeling factors	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12247 all species →	POLYCOMB GROUP PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003682 all species →	Molecular Function	chromatin binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0035102 all species →	Cellular Component	PRC1 complex	Interproscan
GO:0042393 all species →	Molecular Function	histone binding	Interproscan
GO:0045892 all species →	Biological Process	negative regulation of DNA-templated transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000012311.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.