Gene detail

Detailed information of ENSQPTP00000012330.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031561645.1, cryptochrome DASH-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q75WS4	Cryptochrome DASH OS=Xenopus laevis OX=8355 GN=cry-dash PE=2 SV=1
Q4KML2	Cryptochrome DASH OS=Danio rerio OX=7955 GN=cry-dash PE=2 SV=2
Q7NMD1	Cryptochrome DASH OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX=251221 GN=cry PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009620 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03441 all species →	FAD_binding_7	FAD binding domain of DNA photolyase	Domain	Interproscan
PF00875 all species →	DNA_photolyase	DNA photolyase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005101 all species →	Domain	Cryptochrome/DNA photolyase, FAD-binding domain	Interproscan
IPR006050 all species →	Domain	DNA photolyase, N-terminal	Interproscan
IPR002081 all species →	Family	Cryptochrome/DNA photolyase class 1	Interproscan
IPR036134 all species →	Homologous_superfamily	Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily	Interproscan
IPR014133 all species →	Family	Cryptochrome DASH	Interproscan
IPR014729 all species →	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR036155 all species →	Homologous_superfamily	Cryptochrome/photolyase, N-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11455 all species →	CRYPTOCHROME	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000719 all species →	Biological Process	photoreactive repair	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0003684 all species →	Molecular Function	damaged DNA binding	Interproscan
GO:0003904 all species →	Molecular Function	deoxyribodipyrimidine photo-lyase activity	Interproscan
GO:0071949 all species →	Molecular Function	FAD binding	Interproscan
GO:0003913 all species →	Molecular Function	DNA photolyase activity	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K25656	cry, CRYD; cryptochrome	-	Others	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.