Gene detail

Detailed information of ENSQPTP00000013136.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_020913699.1, UDP-glucose 6-dehydrogenase [Exaiptasia diaphana]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000016184

CAATCGTCAGTGGCCATCCAAGGAATACCCCTTCGATGTTAAAACGCATGCGTTACTGTGGGATCGTGTTCATTTAGATACTTCGGTGATCGTCACTTGAGTTGTTGTAATCTTGAAGCCGACTTTAAGATTTTTACTATGGGCCCTATAAAAGATATCTGTTGTTTAGGAGCGGGATATGTTGGTGGACCGTCTTGCAGTGTAATCGCGCTAAAATGTCCTGATATTCAAGTTACAGTAGCTGATCTTAGCCAACAAAAAATCGATGCTTGGAACTGCGATTCTCTGCCAATATTTGAGCCTGGGCTTGCTGAAGTTGTGAAAGAATGTCGGGGAAGAAATCTTTGGTTTACAACTGACATCAATTCAGCGATAAAAAAGGCTGACTTGATATTcatatgtGTTAACACGCCAACAAAAACTTTTGGACTAGGAAAGGGTAGAGCGCCTGATTTGAAGTACATAGAGTCTGCTGCCAGGCATATAGCGCAGGTTGCCGAAGGAGGCAAAATTATTGTAGAAAAGAGTACAGTTCCTGTACGAGCTGCAGAGAGTATTACAAGAATATTAAGTGCAAATGCTGATAAAAAGTTTCAGgTCTTGTCAAACCCAGAATTTCTTGCCGAAGGAACAGCAATCAAAGATTTGTTGGAACCAGACAGAGTTCTTGTTGGTGGTGACCAGACAAAAGAAGGACTTGCTGCAATAGATGCTCTGAGTTGGGTCTATGAACACTGGATACCAAAAGAGAAGATAATCAAGACGAACACTTGGTCTTCAGAACTATCCAAACTGGCCGCTAATGCCTTCCTTGCCCAGCGCATTTCAAGCATCAACTCCATGAGTGCAATATGCGAGGCCACTGGAGCAGATGTATCTGAAGTGGCTCACGCCATTGGTATGGATTCAAGGATAGGAAACAAGTTTTTACAGGCATCTGTTGGTTTTGGTGGCAGTTGCTTCCAGAAAGATGTCCTAAACCTTGTGTATCTTTGTGAAGCTCTGAACCTTCCCGAAGTAGCTAACTATTGGTATCAGGTGATCTCAATGAATGATTATCAAAGAAGAAGGTTCACCAACAGGATCATCAACTGCTTGTTTAACACTGTGACAGGAAAACGAATAGCCATCATGGGATTCTCTTTCAAGAAGAATACAGGTGACACAAGAGAGTCAGCCAGTATCTATATATGCAAATACCTAATGGATGAAGGAGCTTTCCTAACTATCTATGATCCAAAAGTAAAGGAATCCCAGATTCTATTAGAACTACAAGACCCTGCCATCTCTGAGGACCCAACAAGAGTGAAGCGGCTGGTTACTATTGAACAGGATCCTTACAAGGCTGTGGACAAGGCTCATGCCTTTGTAGTCTGTACTGAATGGGATGAATTCAAGACGTATGACTACCAGCGTATCTATGACAACATGCTGAAGCCTGCCTTTGCGTTTGATGGACGGATGATTcttgaccatcatcatcttcatgatATTGGTTTTCAAGTTGAGACAATCGGTAAAGTTGTATCATCTGGTTATTCACTTCCATCCATGTAAATCAACCTGTGTCGTCTTGCCTTAACTAATCAAAATCAACCAATCGGCATTCATGTGGGCATCAATCTAATTGACCATTCAGGAATGAGGAAGACTTTATCTGTTTGGCCAATCAGCATGTTGGAAATCTGATTGACcaatcagcatcaaagttgatATCTAGTTAACCAATCAGCATCAAGGAATGTACTTGGTTGTACAGTCAGCATGAATGCAGATAGCTGATAATCCAATCAGCTGCAAGCTTATGACCTGTCCGTTTGTCCAATCACAATAAGTGTTGGCATCTAATTGGCCAATCAGCATATAGGGTTGTGTTTTGTGATTGGTTTTATCTTTGACCAATCAGGATACATGTGGAGATatcattagccaatcagaacaaaTGGGCATAAGTCTAATAGACCAATCAGACATATGACTAACAGCCTGGTTGACCAATCAGCATTGACTGCCACATCCACCAAACCAATGAAGTGCTGTCAACCAATCAGCATGCATGGGTTTTAAGTTATTCTTAACCATACGTTGTAATGTAATCGTGCCGCATCACATTCAGTCGCTCTGGTGTCATTGTTTTACATAATAGTATATTTATATTGTTTAGTATTTAGCCTAAATTATTATTGACCCATATAAACATATATTAAAATACTGATAATTATTAACACCTATTGGTAAACCAAGGCCTTATTATTTAAGGCCTCATGTGCAACAAAGCGAAAAGAGGTTAGGTCTTAAAGTTTTAAACTAGCATATTTGCATAACCTTCATATAAATAATCGCTCATAGCAACATGAGATGATGAAAGGACCAGTGATTACGTCTGCTAAGTTTATAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5F3T9	UDP-glucose 6-dehydrogenase OS=Gallus gallus OX=9031 GN=UGDH PE=2 SV=1
O60701	UDP-glucose 6-dehydrogenase OS=Homo sapiens OX=9606 GN=UGDH PE=1 SV=1
P12378	UDP-glucose 6-dehydrogenase OS=Bos taurus OX=9913 GN=UGDH PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004194 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03720 all species →	UDPG_MGDP_dh_C	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain	Domain	Interproscan
PF03721 all species →	UDPG_MGDP_dh_N	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain	Domain	Interproscan
PF00984 all species →	UDPG_MGDP_dh	UDP-glucose/GDP-mannose dehydrogenase family, central domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028356 all species →	Family	UDP-glucose 6-dehydrogenase, eukaryotic type	Interproscan
IPR036220 all species →	Homologous_superfamily	UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily	Interproscan
IPR017476 all species →	Family	UDP-glucose/GDP-mannose dehydrogenase	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR008927 all species →	Homologous_superfamily	6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily	Interproscan
IPR014027 all species →	Domain	UDP-glucose/GDP-mannose dehydrogenase, C-terminal	Interproscan
IPR001732 all species →	Domain	UDP-glucose/GDP-mannose dehydrogenase, N-terminal	Interproscan
IPR014026 all species →	Domain	UDP-glucose/GDP-mannose dehydrogenase, dimerisation	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11374 all species →	UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003979 all species →	Molecular Function	UDP-glucose 6-dehydrogenase activity	Interproscan
GO:0016616 all species →	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006024 all species →	Biological Process	glycosaminoglycan biosynthetic process	Interproscan
GO:0051287 all species →	Molecular Function	NAD binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00012	UGDH, ugd; UDPglucose 6-dehydrogenase	EC:1.1.1.22	O-Antigen nucleotide sugar biosynthesis	ko00541	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.