Gene detail

Detailed information of ENSQPTP00000013315.1 in Actinia mediterranea

Genomic Location: :...
NR annotation: XP_031554169.1, AP-5 complex subunit zeta-1-like isoform X1 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSQPTT00000016408

atggcggatcaAAGTGGTAGAGATCCTTCGAGTGTCTTGAAGAAAGCTCGGTTGGTCGAGGATGGTGAATTTCAGGAGTTTTGTGTTAAACTTCTCGGTATCCTTCGAAGTCAAGACAGAGGATCAGAATGTACCAGTCAGCTGAGAAGACTCTTTCTGCTTACAGCAGCTACTAGACGAAAGAGGAGAGTCCTAACAGACCTGGTTGAAGAACTCAAAAATGTGGTATCTGAGCCACAGCAAGGATCAAAGAAGATCAAACTACTGTGTTCTGCAATTCTAAGGGAAATAGGACCTACTGCACAACTAGTTATAACTAATGTGGATCCTCCTGTCGACCAGCGCAGTATTCCAATACTATTACCGCTAGTATTAATACAGGGAAAAGAACTGGGTTTTTGGAACAACCATTTGCCTCAGATGATAAGGTGGATTAAAAGTGGAGGAATCCATGTTGACTTGCAAACAGTATCATTAGCTTGTCTAAACAATGTGTTTTTCTCCTACAAAGATTTGATTTCCCAAGatGATATTGGTTTGATTTGCCATCAAATGGCTCACTGGCTTCGGCATGCAAGCACAGTATCAGCACCTAATCCATATCAGAGACAGTTATTTGGAGGAAGCAAAAATAGAGGGTATCAAGCAGTATCAGAAATTGATGGCACAGCTTCCAGATTCTTCTACACAATCCTAAGCATTGCTCACTACAGCTTCCCAGACCAATTCCTCAACATCTATACTTTTTCCATGCTAAGATCTTGGCTACTAAACACAGGGGCTGTCCAAGCCAAACTGGATCAAGGCCCTGTTTACACCCCACAGGAAGGAACACCTCCACTCTCCTTTACAATTGGTTCTCCATCACGTTCACCTTCAGGAAATATTAGCCAATCCCCTTCAAGGGAAAGCTTATCATTTCAAGATggtattttaaaaagaagTCAGGATAATTTAGACAATATTTCAATTAACTCCCAGTCTTCTATTGGAATGGTCATTCCACCTATTTCCCAGTCTCCTGTCAGCCAAatgacatcatcaccaacagaAAGTCTGGGATCTCGATCGCAGACTCCTCTAAATTTTCCTCTGACAGCAGAAGATCCAGAGGAGAGGCCCCAGAGCCAAGTGTCTTCAAGCAAAGGACAACGGAAATTATCTAGAAATATTAGCTTTGCTAAGCTTTTTACACAGCAGGGTCCAAAGACGGGTCAACAGGAACTGAGAGAAAATGCTTGTGAATACTGTTTACGTGTGCTGGAACAGAGTGAAAGAAggCCAACTAAATTGCAAGACAGTCAGATAGTTGAAGCTGGTCTACTAGAAGCCATTCTCACATTGGATCGTCTGTGTACCTATGAAAAGTCTCTTATTCCCAAATTGATTGAAATTGTCAGGAGAATCTATAGTAGAGTGACTGCTGACATGAACAGATGGAACAGAGTGGTGCTTGCAGTCGTGCAGTTTCTGCTTAACCATGgTGAATCAGTTGTTTTTGATCCTGAGCCTGCCTGTAAAGCAGTGTTCAGGACAATGATCAATGCTTTCTACTTAAGGCCTTCTTTTGCTTTTGAGGTCGTCATGTTCTGTCTCGACAACATGGAAAAGCTCTGCTCTTCTACCAGCGTCTTCACCAAGTATTTTCCTAATTTATTCAAGATCTTAGCCTGGTCGCCAAGAACATTCCTGAGAGAGTTTATGCAGCTTCTCCCAGTCATGATGTCAGAGGATACAGTTGTAGAGgttttccacAGTATTCTTGACTTGCCATGTTTGTCAGCCTCCGTATGTGCTTCATGGGCGGCAAGAGGgagaatatcgaataacagtGATTCTCAAGCCTCTATTCCCGCATCTGTAACTGCCTTCCTTGATCCCAAACACAGACCGTTATTTAGCTTCATTTTGAGACCCGAAGCTGGTCATGGAGACACTATTAGCAGGCTCAAAGCATTGCACACTCTCCTTGAAGACATGGCAGATCATCCACGTGTTGTTGTGTCATCACAAGTTGCACCTCCTTTATTAAAcTTATATTTTTCGACGCTTTTGAACGAGGCCGAGATGGATACCGTTAGCAAGCTCATTCCTGTGATTCTTGAACGATCTGTTTTGTTGTACGATTCACAAACCTTTCAACCTGATATCAGAAGAATCCTTGCCGAGAAGCTAGTCCTGATATTCCAGAGATACCCATGCCTTGTAGCTACACATAAACAGGACTTGGTAGATTTCATCACGGGATTCAAGAATCTTGGCCCTGAGAAAGAAGAGTTCTTCATTAATCTGGTGTGGTCGATAGGAGAGTTTGCATCCACGGCTTACGAAGGAGGTTGTACGGTACAGATGATTGTACAATATTTTGAGACTCTTGAAGCGTTGACATATGAAGTAGCAATGCAGACAGCCCCAGGAAAGgTCGTGTTTTCTGGAAAATTAGTATCCGTTTTCATGTCAGCGTTAGCCAAGCTTGCTTCTCGGTGTCAGGATCTGACTCAAAGAGCTATCCTCTGCTGCAGTAAAGTCGTTAGACAAAAACCAGAATTGTTGTCAGATCCCGAATGTTACGATGATCTTGTAACGCGGGCACAGGAACTAATCCAGCTTCTCAAGCTTCCCAACGTCGCTCCTGTTATTCTCAACCCTGATGCAGAATGGATTACTGGAAGGTGGCACAGAGATAAGAATACTTCACTGCCTCTCTTACTACAAACCACTAAACTGGTCTTATCGTGA

Transcript

ENSQPTT00000016408

ccaagatggcggatcaAAGTGGTAGAGATCCTTCGAGTGTCTTGAAGAAAGCTCGGTTGGTCGAGGATGGTGAATTTCAGGAGTTTTGTGTTAAACTTCTCGGTATCCTTCGAAGTCAAGACAGAGGATCAGAATGTACCAGTCAGCTGAGAAGACTCTTTCTGCTTACAGCAGCTACTAGACGAAAGAGGAGAGTCCTAACAGACCTGGTTGAAGAACTCAAAAATGTGGTATCTGAGCCACAGCAAGGATCAAAGAAGATCAAACTACTGTGTTCTGCAATTCTAAGGGAAATAGGACCTACTGCACAACTAGTTATAACTAATGTGGATCCTCCTGTCGACCAGCGCAGTATTCCAATACTATTACCGCTAGTATTAATACAGGGAAAAGAACTGGGTTTTTGGAACAACCATTTGCCTCAGATGATAAGGTGGATTAAAAGTGGAGGAATCCATGTTGACTTGCAAACAGTATCATTAGCTTGTCTAAACAATGTGTTTTTCTCCTACAAAGATTTGATTTCCCAAGatGATATTGGTTTGATTTGCCATCAAATGGCTCACTGGCTTCGGCATGCAAGCACAGTATCAGCACCTAATCCATATCAGAGACAGTTATTTGGAGGAAGCAAAAATAGAGGGTATCAAGCAGTATCAGAAATTGATGGCACAGCTTCCAGATTCTTCTACACAATCCTAAGCATTGCTCACTACAGCTTCCCAGACCAATTCCTCAACATCTATACTTTTTCCATGCTAAGATCTTGGCTACTAAACACAGGGGCTGTCCAAGCCAAACTGGATCAAGGCCCTGTTTACACCCCACAGGAAGGAACACCTCCACTCTCCTTTACAATTGGTTCTCCATCACGTTCACCTTCAGGAAATATTAGCCAATCCCCTTCAAGGGAAAGCTTATCATTTCAAGATggtattttaaaaagaagTCAGGATAATTTAGACAATATTTCAATTAACTCCCAGTCTTCTATTGGAATGGTCATTCCACCTATTTCCCAGTCTCCTGTCAGCCAAatgacatcatcaccaacagaAAGTCTGGGATCTCGATCGCAGACTCCTCTAAATTTTCCTCTGACAGCAGAAGATCCAGAGGAGAGGCCCCAGAGCCAAGTGTCTTCAAGCAAAGGACAACGGAAATTATCTAGAAATATTAGCTTTGCTAAGCTTTTTACACAGCAGGGTCCAAAGACGGGTCAACAGGAACTGAGAGAAAATGCTTGTGAATACTGTTTACGTGTGCTGGAACAGAGTGAAAGAAggCCAACTAAATTGCAAGACAGTCAGATAGTTGAAGCTGGTCTACTAGAAGCCATTCTCACATTGGATCGTCTGTGTACCTATGAAAAGTCTCTTATTCCCAAATTGATTGAAATTGTCAGGAGAATCTATAGTAGAGTGACTGCTGACATGAACAGATGGAACAGAGTGGTGCTTGCAGTCGTGCAGTTTCTGCTTAACCATGgTGAATCAGTTGTTTTTGATCCTGAGCCTGCCTGTAAAGCAGTGTTCAGGACAATGATCAATGCTTTCTACTTAAGGCCTTCTTTTGCTTTTGAGGTCGTCATGTTCTGTCTCGACAACATGGAAAAGCTCTGCTCTTCTACCAGCGTCTTCACCAAGTATTTTCCTAATTTATTCAAGATCTTAGCCTGGTCGCCAAGAACATTCCTGAGAGAGTTTATGCAGCTTCTCCCAGTCATGATGTCAGAGGATACAGTTGTAGAGgttttccacAGTATTCTTGACTTGCCATGTTTGTCAGCCTCCGTATGTGCTTCATGGGCGGCAAGAGGgagaatatcgaataacagtGATTCTCAAGCCTCTATTCCCGCATCTGTAACTGCCTTCCTTGATCCCAAACACAGACCGTTATTTAGCTTCATTTTGAGACCCGAAGCTGGTCATGGAGACACTATTAGCAGGCTCAAAGCATTGCACACTCTCCTTGAAGACATGGCAGATCATCCACGTGTTGTTGTGTCATCACAAGTTGCACCTCCTTTATTAAAcTTATATTTTTCGACGCTTTTGAACGAGGCCGAGATGGATACCGTTAGCAAGCTCATTCCTGTGATTCTTGAACGATCTGTTTTGTTGTACGATTCACAAACCTTTCAACCTGATATCAGAAGAATCCTTGCCGAGAAGCTAGTCCTGATATTCCAGAGATACCCATGCCTTGTAGCTACACATAAACAGGACTTGGTAGATTTCATCACGGGATTCAAGAATCTTGGCCCTGAGAAAGAAGAGTTCTTCATTAATCTGGTGTGGTCGATAGGAGAGTTTGCATCCACGGCTTACGAAGGAGGTTGTACGGTACAGATGATTGTACAATATTTTGAGACTCTTGAAGCGTTGACATATGAAGTAGCAATGCAGACAGCCCCAGGAAAGgTCGTGTTTTCTGGAAAATTAGTATCCGTTTTCATGTCAGCGTTAGCCAAGCTTGCTTCTCGGTGTCAGGATCTGACTCAAAGAGCTATCCTCTGCTGCAGTAAAGTCGTTAGACAAAAACCAGAATTGTTGTCAGATCCCGAATGTTACGATGATCTTGTAACGCGGGCACAGGAACTAATCCAGCTTCTCAAGCTTCCCAACGTCGCTCCTGTTATTCTCAACCCTGATGCAGAATGGATTACTGGAAGGTGGCACAGAGATAAGAATACTTCACTGCCTCTCTTACTACAAACCACTAAACTGGTCTTATCGTGATGATAGTGTACTGAACAAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14764	SPG48	AP-5 complex subunit, vesicle trafficking	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR028222	Family	AP-5 complex subunit zeta-1	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46488	AP-5 COMPLEX SUBUNIT ZETA-1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0044599	Cellular Component	AP-5 adaptor complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19025	AP5Z1, SPG48; AP-5 complex subunit zeta-1	-	DNA repair and recombination proteins	ko03400	deepkoala