Gene detail

Detailed information of ENSQPTP00000013706.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031554142.1, coiled-coil domain-containing protein 40-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000016888

ATGGTTGTCCTTGATCCAGACCATCCTTTGATGATCAGATTTCAACAAGCTTATAAGGCGCATTTGATCAAGCAAGAGGAGAAGCTAACTCTTGAAGAGAGAGAATTGTTGGAAGCTGTAAAgaataagaagaaagaaagagaagaactAGGAGTACAGCTGTATGGTGCACAACAGGAACTAGCCAGACAACAGATGTTACTAGAGAAAGAACATGATATTTTTAATGACATAAACCAGAGGCGCAACCAATGTGAAATGAGCCTTAAAGAGGTGAAAGATATGCATAAACAGATCATAGATGAAATGAACCACAACAGGAAGAAAGcaATTGAGTTAAGAACAGAAGTAGAAAACATCACAGCAAGATTACACTACATGGAAGAAGCTAAGGAAGATGTCCGATCCGACATTGCTGTTATGAGAAGAGCTGCTGAGAAAGCTGATGTTGAAGTGGCTAAAGCAGAAAGTGATAAAAAGAAGCAAGATTTACTAGTGGACATGTTAACTCAAAGAGTGGACCACCTGCAGGAGGAAATCAACATGTACGAAGCACAGTGTGTTGCACAGTCTGAAGAAACTAAGGCTGCTCAGAAAAATCTCTCTGAGGCTCTCACAGAAATAGAGGCTCTTCACCTGGAACAAAAACAACTGCTTCAACAGTGGAATAGCAGTTTGATTGGTATGAAAAGACGTGATGAGGCTTACTCTGCCATGCAAGAAGCATTAAATCTTCAAAGACAAAGAATCCTAGCCATTGAAACAGAGATTGAAGGATACAAAAAGTCAATCAGTAAGGCCCAGGAACAGAACGAACAGATCACCATGACACAGATCAAGATCGAACAAGACATCTCGATGGTCAAGAAACTCATGTCTATCAGTAAGACCAAACTAGAAGCTCTCAAGACAGAGTATAGTACATATACAAGGACTTTACATCAAACTGAACAACAACTGAATCGAGCTCAGACAGAAGTGGTTCTTAAAGAAAATGAACTCACAGCATTAAGAAAACAGATAGAACGTGAATTTTTGGAGAAAGTTGGACTTGAAGATGCAATCATGGAAAAATTGAGATCCCAATTAACCATGGATAAAGCAACTCAGTATACCAAGAAGATGACAGACAAGATGAGGAGGAGAGCTACAGAACTGGAAAGCCAGGTTGCTGAAGTTGAAAACGAGATCGCCAGAGATGTCCTTGAGATCTCCAACACCTCAACCCGAGTTAAACAACTACAGTCTATCATGGACCAACTGAACGATGAAATACACAAGAAGAACGAAGACATATCTAAGATAGAAGGAGAAATAATCAAGAGAAATGCAGTCATTGAGAGAAAACAAGGCAGTATTGATCAACTGAATAAGAAAGTTGAACAGATTAAAAGCAATTCTGGGGGAGAAGAGACTGGTCCTATGGAGCTACAGATTCATACCCTCCAGAAACAGATCGAAGCTCGCATGAACGATATCATCCAACTCCAGCAGTTCTGGCTGAGAGGACAAAGCGAGCTAGTCAAGACTATCAAAGATGTACAACAACAGAATCAGGATATGGAGTACGTCAAGAAACAGTACACTATACtgcaacaaaagaaaatgagaatTGAAGGTGAAATCGATTCCCACGAACACGAGATCGCAGACATCAATCGCAACGTCCGTAACATACAGAACGATATGATTAAACTAAACACCCTGATAACAAAAGAACATGGATATAAAATGAACCTCGCACAGGAGAACACTCTGACGGAGAGTGACTTTATACAGTCCTTACGGGAAGCCGAGCGTGAATCACTGAAAATGCAAGACCAAATCGAGGCTTTGACGGAAGAGAAGGAACGCCTGCTGAATAGCTTAGTTGAAGCAGAACGTCAGATTATGTTATGGGAGAAGAAAACACAGCTGGCTCGTGAAGCGAAGAATGCAGTCGATACAGACTATGGTCATGGTGAAATCCATGCTATGAAAGCTGAGATTCATCGTATGGAGGTCCGCTATTCACAACTGATGAGgcaacaagagaaaatgatcCAAGACATGGAAAAAGCAGTGGTTCGAAGAGAAACGATTGTAACTAGGGGTGATGCGCAGAGCAAGATGGGTAAAGTAGCCAACACTAAGGGATCCTTACAGAAAAAACTGATcgaaatgaagaagaaaatcagGCAGACAAATAACGATGCTAATGCATGTGATGTCGAGATACAATCATTCCGCGAGAAACAAATGCAGGTTAGTCGGGATCTGGAGGAAAAACAGGTCACCTGTCAACAGTTACAAAGTCGTGCGGACGAGCTTGAAACTGAAATTGATAAAATGACTGAAGATAGACAACGGAATTTGTCAGAAATCGTTGCTAAGCAACAGAAAGCTAAATACTACACAAAACTCAAAGAGGGACGCTACACTCCCTTATGTAAAACACCCGAGTCTCTTGAAGCCGAGATGCAGAAACAAAGAGACCGACTACAATCACTTATGACTATTGTCGATAAACTCAACCAGGAATTCCCGCATGCGCAGCAGGTGCTTCGTAACGTGACACTGTCTCTCAGCCAGCGAGGACTTCCCGACGACTAA

Transcript

ENSQPTT00000016888

GCTTTGAAGGACTTTCGTTTAAGCGACCCAAGTGATGCAGACACAACAGTCACAGGAGCAGAAAGTGAAAGGATTGTTCCAACTGCCAACTTTGACATCGATATACCAAGTCTGGATTTACCTGAGGGTTTAGGACAAACCATATTGGCAGGAAATGCAGACTTTAATACTGGTATTGATGATGTGGAGGATGGTAATGTTGGGGAGGATGAAGACGTGGATCAAGATGGCGACGGCGAAGAATTGAGTGAAGACGAGTCTGAAGGAGAAAGTGAGATGGTTGTCCTTGATCCAGACCATCCTTTGATGATCAGATTTCAACAAGCTTATAAGGCGCATTTGATCAAGCAAGAGGAGAAGCTAACTCTTGAAGAGAGAGAATTGTTGGAAGCTGTAAAgaataagaagaaagaaagagaagaactAGGAGTACAGCTGTATGGTGCACAACAGGAACTAGCCAGACAACAGATGTTACTAGAGAAAGAACATGATATTTTTAATGACATAAACCAGAGGCGCAACCAATGTGAAATGAGCCTTAAAGAGGTGAAAGATATGCATAAACAGATCATAGATGAAATGAACCACAACAGGAAGAAAGcaATTGAGTTAAGAACAGAAGTAGAAAACATCACAGCAAGATTACACTACATGGAAGAAGCTAAGGAAGATGTCCGATCCGACATTGCTGTTATGAGAAGAGCTGCTGAGAAAGCTGATGTTGAAGTGGCTAAAGCAGAAAGTGATAAAAAGAAGCAAGATTTACTAGTGGACATGTTAACTCAAAGAGTGGACCACCTGCAGGAGGAAATCAACATGTACGAAGCACAGTGTGTTGCACAGTCTGAAGAAACTAAGGCTGCTCAGAAAAATCTCTCTGAGGCTCTCACAGAAATAGAGGCTCTTCACCTGGAACAAAAACAACTGCTTCAACAGTGGAATAGCAGTTTGATTGGTATGAAAAGACGTGATGAGGCTTACTCTGCCATGCAAGAAGCATTAAATCTTCAAAGACAAAGAATCCTAGCCATTGAAACAGAGATTGAAGGATACAAAAAGTCAATCAGTAAGGCCCAGGAACAGAACGAACAGATCACCATGACACAGATCAAGATCGAACAAGACATCTCGATGGTCAAGAAACTCATGTCTATCAGTAAGACCAAACTAGAAGCTCTCAAGACAGAGTATAGTACATATACAAGGACTTTACATCAAACTGAACAACAACTGAATCGAGCTCAGACAGAAGTGGTTCTTAAAGAAAATGAACTCACAGCATTAAGAAAACAGATAGAACGTGAATTTTTGGAGAAAGTTGGACTTGAAGATGCAATCATGGAAAAATTGAGATCCCAATTAACCATGGATAAAGCAACTCAGTATACCAAGAAGATGACAGACAAGATGAGGAGGAGAGCTACAGAACTGGAAAGCCAGGTTGCTGAAGTTGAAAACGAGATCGCCAGAGATGTCCTTGAGATCTCCAACACCTCAACCCGAGTTAAACAACTACAGTCTATCATGGACCAACTGAACGATGAAATACACAAGAAGAACGAAGACATATCTAAGATAGAAGGAGAAATAATCAAGAGAAATGCAGTCATTGAGAGAAAACAAGGCAGTATTGATCAACTGAATAAGAAAGTTGAACAGATTAAAAGCAATTCTGGGGGAGAAGAGACTGGTCCTATGGAGCTACAGATTCATACCCTCCAGAAACAGATCGAAGCTCGCATGAACGATATCATCCAACTCCAGCAGTTCTGGCTGAGAGGACAAAGCGAGCTAGTCAAGACTATCAAAGATGTACAACAACAGAATCAGGATATGGAGTACGTCAAGAAACAGTACACTATACtgcaacaaaagaaaatgagaatTGAAGGTGAAATCGATTCCCACGAACACGAGATCGCAGACATCAATCGCAACGTCCGTAACATACAGAACGATATGATTAAACTAAACACCCTGATAACAAAAGAACATGGATATAAAATGAACCTCGCACAGGAGAACACTCTGACGGAGAGTGACTTTATACAGTCCTTACGGGAAGCCGAGCGTGAATCACTGAAAATGCAAGACCAAATCGAGGCTTTGACGGAAGAGAAGGAACGCCTGCTGAATAGCTTAGTTGAAGCAGAACGTCAGATTATGTTATGGGAGAAGAAAACACAGCTGGCTCGTGAAGCGAAGAATGCAGTCGATACAGACTATGGTCATGGTGAAATCCATGCTATGAAAGCTGAGATTCATCGTATGGAGGTCCGCTATTCACAACTGATGAGgcaacaagagaaaatgatcCAAGACATGGAAAAAGCAGTGGTTCGAAGAGAAACGATTGTAACTAGGGGTGATGCGCAGAGCAAGATGGGTAAAGTAGCCAACACTAAGGGATCCTTACAGAAAAAACTGATcgaaatgaagaagaaaatcagGCAGACAAATAACGATGCTAATGCATGTGATGTCGAGATACAATCATTCCGCGAGAAACAAATGCAGGTTAGTCGGGATCTGGAGGAAAAACAGGTCACCTGTCAACAGTTACAAAGTCGTGCGGACGAGCTTGAAACTGAAATTGATAAAATGACTGAAGATAGACAACGGAATTTGTCAGAAATCGTTGCTAAGCAACAGAAAGCTAAATACTACACAAAACTCAAAGAGGGACGCTACACTCCCTTATGTAAAACACCCGAGTCTCTTGAAGCCGAGATGCAGAAACAAAGAGACCGACTACAATCACTTATGACTATTGTCGATAAACTCAACCAGGAATTCCCGCATGCGCAGCAGGTGCTTCGTAACGTGACACTGTCTCTCAGCCAGCGAGGACTTCCCGACGACTAATAGCGAAGCAGAGCCGAAATCTTTCCGAGGAACAACGATAGAAGcttgcttttttaaaaaattcaaaatgtttcTAAATTGTAAAAATCCATTTCGACGTTTAGTCTTTTGTAATTAAGAAGCAAATGTACCGATTTTCAGTGCGCTGTCGTAAAATATGATATGAATTGTAAGGTACATCAGTGTTTAACTTATGGAGTTTTAATTAAATGAGTGACAAATAGCCATTCAAGATTGTATTGAAAATGGGAGGACGTAATAAAGAGAAAATCCTCTTTTATTGTATATCCGATagttgaattatttatttgttcagGGCAGATTCAAAAGCCCGGTGAAGTGACGTTTTGAGAGGATTATGGACGAACGTGATTAGATTTCCTTGTCTGGATAAATAACCGCAGTCCTGGGATTCTTTCAAGTCGGCAACCCTGTTAATATTTGAATCGACCGTTTtttcaaggttgcgtgcgcatctaatcttgacgggccacaaaactaaAAATCGCAAATTCAATACAATTGAGAAg

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4G0X9	Coiled-coil domain-containing protein 40 OS=Homo sapiens OX=9606 GN=CCDC40 PE=1 SV=2
Q8BI79	Coiled-coil domain-containing protein 40 OS=Mus musculus OX=10090 GN=Ccdc40 PE=1 SV=1
Q56A40	Coiled-coil domain-containing protein 40 OS=Danio rerio OX=7955 GN=ccdc40 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006471 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08647 all species →	BRE1	BRE1 E3 ubiquitin ligase	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037386 all species →	Family	Coiled-coil domain-containing protein 40	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16275 all species →	COILED-COIL DOMAIN-CONTAINING PROTEIN 40	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0035082 all species →	Biological Process	axoneme assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23730	CCDC40; coiled-coil domain-containing protein 40	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.