Gene detail

Detailed information of ENSQPTP00000013716.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031549291.1, actin-like protein 6A [Actinia tenebrosa]
Species Actinia mediterranea · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000016899

CTTTGCCGCCAAACTCgtgtgtttttgtttcttgtcaaaaaagcttgaaagaaaagcttaaaattttatatttatagtgAATCAAAATGAGCGGAGGAGTCTACGGGGGAGATGAGGTTGGAGCTCTTGTCGTTGATGTCGGTGCCCATACGTTCCGCGCTGGATATGCCGGGGAAGATTGTCCAAAGTACGATGTTCCTGCTTATATCGGAGTGATTGGAGATGAAGAAACAAAAGATGAACAGATGGAAACAGATCATCCAACAGAGGGAACTGcaaAGAAACCAGATACCAGAAAATATTACATTGACGTCAATGCCATATCAGTACCTAAAGAAAACATGGAAATTATGACGCCCATTAAAGATGGGATGATTGAAGATTGGGATCTGTTTGAGAAGATGCTGGATTACATTTACAAGAAAAACTTCAAATCTGATCCAGTGCTACATCCTTTACTTATGTCAGAGGCATCGtGGAATGTTCGACCCAAACGTGAAAAGCTCACAGAGTTAATCTTTGAAACATACAATGTACCAGCATTTTTCCTGTGTAAAAATGCCGTACTCACAGCTTTTGCAAACGGAAGGTCAAATGGTTTAGTGATTGATTCTGGTGCCACCCAAACAAGTGCTGTCCCTGTTCATGATGGATATGTCTTACAACAAGCCATCGTCAAGTCTCCGTTAGCAGGGGATTTCATCACTGCACAGTGCCGACAGATGTTTGAAGAAACTAATGTTGAGATTGTTCCACCCTACCTGATAGCTAGCAAGGAAGCAGTAAAAGAAGGAGCGTCACCAATCTACACTAAAAAGACTACACTACCATCAGTCACCAAGTCATATCAGAGATACACAACTAATGAGGTCATAAGAGATTTTCAAAAGAGTGTTCTACAAGTGTGCGATAGTGCATATGATGAAGGTATTCTCAATAGCATACCAACTGTTTCGTATGAGTTTCCCAATGGCTACAACAACTCTTATGGCTTGGAGAGATTTAGAATCTGTGAAGGTCTCTTCGATCCTTCAAATGTTAAGGGTATAGAAGGCAGTACAGCCATGGGTGTGACACAAGTCGTAACAACTAGTGTTGGAATGACAGATATTGACATTAGAGCAGGTCTGTTTGGTAGTGTGATAGTTACTGGTGGTAATACCTTATTATCTGGCTTTGTCGATAGACTGAACAGAGAGCTTCTATCTAAAACCCCACCGAGTATGAGACTCAAACTTATATCCAATAACTCATCTGTGGAGAAAAGATTTAATCCATGGATTGGTGGCTCCATATTAGCATCCTTGGGGTCGTTCCAACAAATGTGGATATCAAAGCAAGAATATGATGAACAGGGCAAAGGATGCGTCGAGAGAAAATGCCCTTAGACCATTATACACTCACTCTCCTTTGCTCACTGggattataaatattatacaGTACATCCTAGCATGAGCATCGATCGATGTGACATCTTCGTGTACAAAAAGCCATCTTAAtgccccttgcatgtgacgtcatagtagCAAAATTtataagacaaaacaaaagaatttcaatctcctgagaattggaaacctattgtcatgtcctccaaattgagctgcattccgacgtgctgcaagcGATTTATAGACATTTTTAGCTTTGTTTCTAATGTTTCCCCATTACagtccacgtgtcattctctagggtatcatttctttgtttaatgcttgtgcatgagaagacacacgaaaatgaatacaactctaacaaagaatcttattctcaaggaagTTACACGTTGTCTGAAGCATTACGCTCGAGGTAAAAGGGTCTATTACTGATTCGAGGAAGAACTAGGTGACCCAAtgccaagaaagaaagaaagttccttaagccccgtttacactggcgatttttgtggcaattttcggaaatatgaaatattttgtctcatccttccaAAGAGGCATTCGTCTAGAAAAATCTTAGTATCCCaaataaaactttacaagtcaattctttaccattatttattatggacaataTCGCAAAAATATCACAgcaaaaatcgcaaaaaaatcgctagtgtaaacggggctttatgGACGCCTTGTTTGTACTCCCCGCCTCATTGGCTAATGTAAAACTCCTAGGGTATATGTGACATCATAGCGCCCATCATAgtaatagaccagtttcgaattccaaattaccgctgtgtgtcttgattacagactcatttgcacagggttagcctcgtatcagtgtttaaatattcacaaataccaacggtaaagtaaagaatgcacaacttcaaca

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O96019	Actin-like protein 6A OS=Homo sapiens OX=9606 GN=ACTL6A PE=1 SV=1
O94805	Actin-like protein 6B OS=Homo sapiens OX=9606 GN=ACTL6B PE=1 SV=1
Q9Z2N8	Actin-like protein 6A OS=Mus musculus OX=10090 GN=Actl6a PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006706 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00022 all species →	Actin	Actin	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043129 all species →	Homologous_superfamily	ATPase, nucleotide binding domain	Interproscan
IPR004000 all species →	Family	Actin family	Interproscan
IPR004001 all species →	Conserved_site	Actin, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11937 all species →	ACTIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003682 all species →	Molecular Function	chromatin binding	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0007399 all species →	Biological Process	nervous system development	Interproscan
GO:0016514 all species →	Cellular Component	SWI/SNF complex	Interproscan
GO:0035267 all species →	Cellular Component	NuA4 histone acetyltransferase complex	Interproscan
GO:0043044 all species →	Biological Process	chromatin remodeling	Interproscan
GO:0043967 all species →	Biological Process	obsolete histone H4 acetylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11652	ACTL6B; actin-like protein 6B	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.