Gene detail

Detailed information of ENSQPTP00000013888.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031568314.1, gamma-aminobutyric acid receptor-associated protein [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9GJW7	Gamma-aminobutyric acid receptor-associated protein OS=Bos taurus OX=9913 GN=GABARAP PE=3 SV=2
O95166	Gamma-aminobutyric acid receptor-associated protein OS=Homo sapiens OX=9606 GN=GABARAP PE=1 SV=1
Q9DCD6	Gamma-aminobutyric acid receptor-associated protein OS=Mus musculus OX=10090 GN=Gabarap PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001142 (this species only)
Ubiquitin family	ULD\|UBL\|ATG8 · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02991 all species →	ATG8	Autophagy protein Atg8 ubiquitin like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004241 all species →	Family	Autophagy protein Atg8 ubiquitin-like	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10969 all species →	MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000045 all species →	Biological Process	autophagosome assembly	Interproscan
GO:0000421 all species →	Cellular Component	autophagosome membrane	Interproscan
GO:0000422 all species →	Biological Process	autophagy of mitochondrion	Interproscan
GO:0005776 all species →	Cellular Component	autophagosome	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006995 all species →	Biological Process	cellular response to nitrogen starvation	Interproscan
GO:0016236 all species →	Biological Process	macroautophagy	Interproscan
GO:0031625 all species →	Molecular Function	ubiquitin protein ligase binding	Interproscan
GO:0050811 all species →	Molecular Function	GABA receptor binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000013888.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.