Gene detail

Detailed information of ENSQPTP00000014533.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031560691.1, uncharacterized protein LOC116296758 [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000017900

ATCTGAATGAAATCCGATGTGGGGGTTTGTCAAGCAAAAGCAAACAACGACCGCGGACAAGGTCCGAAGAGGTTCCAAGCAAACTTTCAAGCGTTTAATCCCTCCCCTATACCACACAACTTCAAGCCTAATCACCGTGGCAGGAATTGTGTGTCACACTTCAGAGTATATGTAACAGGACGAACAAGCGATTGCACAGGAAATATTTCATCTTAGCGAAGGATATGGAGCGACAAATAACTTCACATTTAGTCATCCGTAACGGTAGGGTATTAGACCCTGCTAATAGCTTCGATGGAATCGCTGATGTagaaatccaaaatggcaAGATTGTCAAGGTTGGAAAAGACCTAAATATTCAACTCAAGCCAAACGAAGAGTTTGATGCCACGGGCTGTCTTGTGACCCCTGGTTTGATCGACTTCCACGCTCATGTTTATCAGTACGCTACTCCTCTAGGAGTGAACCCTGACGAAACTTGTCTTGCTAGAGGCGTTACAACAGTAGTGGATGCAGGCAGTGCAGGTGCAAGTACCTTGCCAGGTTTGCGGAAGTATATCATGGAAAAGAGCAAGACAAGAGTTCTTTGTTTTGTGCATGTTGCATCCCATGGACTCAGTGCTGCTGGATGTGCTGGTGTTGTAAAGGGTGGTGAATGTGATTCTCTCAACCAAGTTGATCCAGAGTCGTGCGCAAAATGCATCCAAGAAAACAGAGAAGTAGCAGTTGGTGTCAAAGTACGATTAAGTTGCTCTGTcactaatgatggtcaatttGAAGAGGAAGCTTACAGGAGAGCTCTGAGAGCATCAGCAGCAGCTGGTGTGCCATTGATGGTCCACTTTACTCATTCATCAATCTCAGTGAATGAAAGCCCAGATGCTGGCCAGTTGACTTGTCCAGGAAGCCTAAAGAAAGGAGATATTCTCACTCATGTCTTTCATGCCCATCCGAGTAGCATCATCAATCCTTCAACAAAGAAGATCCACCCATCTATTCACCAAGCTAGAAGGCGAGGTGTATTGTTTGACATTGGGCATGGATTTGGGTCCTTTTCATGGACAGTTGCAGAGATATGTGCAAAGGAACAGTTTTGGCCTGATATGATTAGTACTGACTTACACACCAAGTCTCTTGATGGACCTACCTATGATCTTCCAATGGTAATGTCGAAATTGTTGACGATTGGGATGCCTTTGGTGGACATCATCAGGGCAGTCACCATAACACCAGCATCAGCTATTGGGTGGCAAAGTAAGATAGGTTCTTTGAGTCCAGGACTAGTAGCTGATGTTACAGTGCTGAGGGTAGAAGATGTTGATATGGAAATAGAGGACAGTCAAGGCCAAGTTAGACAAGCTGAGAAATTCTTGATACCTGTTGCTGTATGGAGGGATGGAAAACGTTTCATAGTAAGAAAACCAGACCCACTACCAGGCAAAAACACAACAAGACTGATCGAGAACTGGGATGGCCTTATTGTAAAGGATAACAAAAAGCCTACACCATTGGAATGACATTGCCATTAACTTATAAATATGAACAATAATTCTattgtattttaaaataaaagctaGCAATAATAAATTCCAACATTTTGCTTTTTCCCACATCATTATCAAGAGTGACAAGCTAAGTTTCAGTGGACGGTGTTTACTAATATTATTAAGTAAATAGTCTTTAATTATATagtaaatgtttaaaatgtaTTACTTATTGAAGCCATTGAATTTGCACTGAGATATAATATTCCATtggttaataataatgataataatataaattagACTCTTATTGCACATGTAATTAATGTGGGTATTAACACgttttaggggacatatttccaatatgGCAGCTATTCGataaaacagccccaaaattCACTGTAATGACAACCCAACCGAGATTTTTCTCAATCTTGGTATGGCTAATAACCCTGTCTTAAATAATAAGATCCACTGTCAGACTGTTCCATACACTCATGTTGCTctttatatatactaatgctATCTTTTCCCTTCCTAACGAATCTAAATAATATCTTAATATCATATAAATTAATAAGGTTTAGGTTATTTTAAAAGAACAGAAACCGTATACCTAAAATGGTACCTTTAtacttttcttttatatttttctttttatattctttttaatTCTGGACTACTAGcttaaacttttaaaaatttctgatttttaaaagataatttattttaatgctttGTTGGTAACATCGTGGTGTACGGGTTAACCAAGTGTGTCATAGGTTTTCAAGCACACGAGTGGGACTTAGAGGATTTTGGTTCTCCTCACttggaaataaaaatttaatggCAGGCAAGATTCGAACCTGGCACCCTTGGCACCAAATGACATTACATTGCCTATCCcaaccctaaacctaaccgTTCAACCATGAAGTGAATTGGCTTGAATGCTTTCcaatttttgtcatttaaaatgATGCTTCATTATTGAATGcacaaatttatttattatagtatAATATATGCTAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A6X391	Deacetylase Oant_2987 OS=Brucella anthropi (strain ATCC 49188 / DSM 6882 / CCUG 24695 / JCM 21032 / LMG 3331 / NBRC 15819 / NCTC 12168 / Alc 37) OX=439375 GN=Oant_2987 PE=1 SV=1
Q7CS13	Deacetylase Atu3266 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3266 PE=1 SV=2
Q39US3	Dihydroorotase OS=Geobacter metallireducens (strain ATCC 53774 / DSM 7210 / GS-15) OX=269799 GN=pyrC PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006498 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01979 all species →	Amidohydro_1	Amidohydrolase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011059 all species →	Homologous_superfamily	Metal-dependent hydrolase, composite domain superfamily	Interproscan
IPR032466 all species →	Homologous_superfamily	Metal-dependent hydrolase	Interproscan
IPR020043 all species →	Family	Deacetylase Atu3266-like	Interproscan
IPR006680 all species →	Domain	Amidohydrolase-related	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42717 all species →	DIHYDROOROTASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016810 all species →	Molecular Function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	Interproscan
GO:0019213 all species →	Molecular Function	deacetylase activity	Interproscan
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01465	URA4, pyrC; dihydroorotase	EC:3.5.2.3	Pyrimidine metabolism	ko00240	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.