Gene detail

Detailed information of ENSQPTP00000015127.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031561299.1, serine/threonine-protein kinase SMG1-like isoform X2 [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000018599

ATGTATGAAAGgAACTTATTAGCAAATGTAAAAGATAATTTGGTTCAGTGTCTTGTAATGTTTGGAGCCATGCTTGGATATGATATGAAAAGATTGTTTCAATGGATTTTTAACAAGTTGGATTCCTCTTCATCTGATGATATCAAAACTTTACTGCTAACAGCTCTATCCAAGataaTTCAAAATGAAAGCAGTCAGCAATGTTTTAGAGAAGTCGTTGTGAATGTGATGAGCTTGTTGGAAAACATCCTTGAAAATGTTGACGCACCAGAATTGTTGGATGCAGTACTTAGCGTCATCATGTCCATTGCTACTGATTACCCACAAGCCTTTGCAGGCTACTTTAGAGACACAGTAGACATTCTTGTTGGTTGGCACATCGACATATCACAGCAACCATCCTTGACAGCTCACATGTCAGAATGTCTGATTCAACTCCATCCCTACTGGGCTTCAGACATTGCATTCTCCCTGACTCTTCTTGGTCAGTTTCTGGAAGATATGGAAGCTTATGCCGAGGAGCTGAGCATGTTGGCAAATAAACAAGGTGCAAGTGATGGCCTACCGTCGCCGTATACTTCATTACCAAAACTGACGGCACTAGTAAGGGTCTTAACTACTGTTGTTAATGGAATTGGAGATGTCTTTTCACCAGCTCAGACACCTGCAATTACAATACCTTACATAGAAGATATAATCCAGAGAGTAATTAAAAGTATTTGTCTGTCTGGGTTTAAATTCTACTATGAACAACTCTTTATTGTTGGTAATGATTGTTTACGTTCATTGTGTAACTGGCTAAAAGGGTACTATGCCGGCTGTTGTGATCATACCGCTGTGTTCATCATCCAGCAGTTACAGTACTGTCAGACACCCACCTACCCCCATGTCATGTCCATACTTGACCTCGTAGACATGGTGAGAAGCAAAGTTGGCACATCCATCCCTATTACCTTTATCAAGACTCTTTTACATCCTGGCTCACAATTCGTGAAGCTCAGACTAACTCCAGATGAAGCAATTCTATCCAGTTTGATGAAAATCTATCAAGGATTCCTGGGGATTCGTGATGTACAATTAATGGAAGCCACTTACAACATAACTGTTGCTGAACTCACAGACCAATTTAATCAACTCAAACAATTGGCTAAGGCTTGTAGAGGCACTGATTCAGAGATCCTGTCATCAGACCCGGTTAATGATGTGGAGAGCTCAAAACAACAAGCAGACACAGCTGACGTCGTCAGTAGGGGAGGTGTTCATCAGCCAATCATGGATGAGGGAAGTACAAGGCAGACATCAAGTCAGCCAATGACAGACAACATCACAGGTGCTGTGAACGGACCAATTGAAAGTGAGGGAATGGTCTCCATGGAAACATTAAGTGAACCAACCATGGGTTTTGTGACAGATGAAAATAAGCCAATCATAGGTGATGTGATTACCAGCAATACAGTCAATGGACCAATCACAAATGACACaggaaatcaaccaatcacagataGCATAGACCTGACAGTCAGAGCTAACCATCTTCAGTCTATAATCATATTTGACTTGTGTTCATTGTCAGAGATTGCAACAGAAAAGTCTCCCATCATTGGGCTATGGAAGTTAACCCCCACTCTCTTTGACCTTCTAACCCAGTACATAAGTGCTTGTGAGTGGACAGTAGCAGCATGCTATCCTGCCGTGCAGTACACCATTCTACATGCATTGTATACCCATTGTCAAAGCAATGCCCATTTCTTGTCCAGTGTCAAAGATCCATTcaccatttcagaccaaaacaAGAAGGGAAGCTTAAGTTTcgttcttcatcttctttctAAAGTCCTCATTAGTTCTACTTCATCATATGATACCAGGAAACTGTGTTTGGTATGGCTAATGGAGACGCTTGACTTAGTCTTCAAATCAGGACCAGAAATAACAGCAGCAGTAAAGGAACACTTTAACTTTGACATCTTAGGAAATAGTTTATTGCCACTGTCATTCAATCCATGTTGCCACTTTTCATTGGAAGTGTGCGAGTGCATGAAAATCCTCATTGAACTGAAGCTCCTGTCAGTCAACTGCCTCAAGAGATGTCTACAAGATTGTACAGTACGATTGATGGATGTCAATGATACTGTGCGGGAATGTTACCTGTCACTCATCAAGGCACTACCTGCTGACATTATAACAAGTTTTGCATCAAGGAACCTTTTACAAGACAGGATAAAGATGCAAAAGACAGCAAGTGATAGTGAATTTAAGCAGTTGACGACAAGTTGTGAGGATGTGTGGTGGGTCAAGAAGAATCACATTGTAAAACAACCAACTGGTACTTTTCATTCGTATAACTTTCAAGTTATAATGGGTTTTATTCAGCATGGAGTACTGCCAAGCAAAGAGATGCAAAGTGACTGGTTGGTTCGGCTTTTTCACACCTGTAATAGACCAAACAAATACACAGCAAGTGAACTGACCCATTTTAACAGCAGTCAGTCGGCCTTATGGTTCTGGTCCACCTGGGAAACAGCTCAGTTCTGTATCCTATCCAAACTGCGCACTTCTTTAGGAAGAGCACAAGAGACCTTTCAGGCCATTGAAGGAAGTCTGAACCAGTATGCTAAAGAGGCCAAGGCGGCAGATCAAGATGACCAGGCAAAACCAAGGAGCAAAGATGATAACAAGTCCAGCGATGAAGATAGTGAACCCACAGCAACCTTCCCTAAGGCATACATGAGTCAACTAAGAACAACTTTGCTGCTCCAATTTGTGGAAAACCTTGAGAAACTGATGTACAATGCATATGATGGTTGCACAGTAGGAATGCCGTCACCTCCCAAGTCTGTGCGAGTGTTCTTTAGGACAAATCGCAGCACCTGCCAGGAATGGTTGTCCAGGATTAGACTACCTGCAGTTGAAGTGAGTCTGCGATGTGGCTCACCAGCCATTGCTGTCTGGCATGGCATGCAGATGCTGCAGGAAATGAAAGCTTCTGGAAAACTGAAGGGTCCTGAATTTGAACAGACAGTATTACTATTGTGTAAA

Transcript

ENSQPTT00000018599

gTTTAGATCGTCACAGCAATGCAGCAAATGATTCTCGTTTATCCAGTATCACCAAGAGGATTATCAGAGAGACTGATCGAGAACGCCGTATTACTGCTGCGAGACAGCTGGAAGAGTATTTCTCAAGTCCTGAGAATATCCAGGTGATCCTTAAGAATCAAGAAAATGTCCTTGTCTCCCTGGAGGATGTAATGTATGAAAGgAACTTATTAGCAAATGTAAAAGATAATTTGGTTCAGTGTCTTGTAATGTTTGGAGCCATGCTTGGATATGATATGAAAAGATTGTTTCAATGGATTTTTAACAAGTTGGATTCCTCTTCATCTGATGATATCAAAACTTTACTGCTAACAGCTCTATCCAAGataaTTCAAAATGAAAGCAGTCAGCAATGTTTTAGAGAAGTCGTTGTGAATGTGATGAGCTTGTTGGAAAACATCCTTGAAAATGTTGACGCACCAGAATTGTTGGATGCAGTACTTAGCGTCATCATGTCCATTGCTACTGATTACCCACAAGCCTTTGCAGGCTACTTTAGAGACACAGTAGACATTCTTGTTGGTTGGCACATCGACATATCACAGCAACCATCCTTGACAGCTCACATGTCAGAATGTCTGATTCAACTCCATCCCTACTGGGCTTCAGACATTGCATTCTCCCTGACTCTTCTTGGTCAGTTTCTGGAAGATATGGAAGCTTATGCCGAGGAGCTGAGCATGTTGGCAAATAAACAAGGTGCAAGTGATGGCCTACCGTCGCCGTATACTTCATTACCAAAACTGACGGCACTAGTAAGGGTCTTAACTACTGTTGTTAATGGAATTGGAGATGTCTTTTCACCAGCTCAGACACCTGCAATTACAATACCTTACATAGAAGATATAATCCAGAGAGTAATTAAAAGTATTTGTCTGTCTGGGTTTAAATTCTACTATGAACAACTCTTTATTGTTGGTAATGATTGTTTACGTTCATTGTGTAACTGGCTAAAAGGGTACTATGCCGGCTGTTGTGATCATACCGCTGTGTTCATCATCCAGCAGTTACAGTACTGTCAGACACCCACCTACCCCCATGTCATGTCCATACTTGACCTCGTAGACATGGTGAGAAGCAAAGTTGGCACATCCATCCCTATTACCTTTATCAAGACTCTTTTACATCCTGGCTCACAATTCGTGAAGCTCAGACTAACTCCAGATGAAGCAATTCTATCCAGTTTGATGAAAATCTATCAAGGATTCCTGGGGATTCGTGATGTACAATTAATGGAAGCCACTTACAACATAACTGTTGCTGAACTCACAGACCAATTTAATCAACTCAAACAATTGGCTAAGGCTTGTAGAGGCACTGATTCAGAGATCCTGTCATCAGACCCGGTTAATGATGTGGAGAGCTCAAAACAACAAGCAGACACAGCTGACGTCGTCAGTAGGGGAGGTGTTCATCAGCCAATCATGGATGAGGGAAGTACAAGGCAGACATCAAGTCAGCCAATGACAGACAACATCACAGGTGCTGTGAACGGACCAATTGAAAGTGAGGGAATGGTCTCCATGGAAACATTAAGTGAACCAACCATGGGTTTTGTGACAGATGAAAATAAGCCAATCATAGGTGATGTGATTACCAGCAATACAGTCAATGGACCAATCACAAATGACACaggaaatcaaccaatcacagataGCATAGACCTGACAGTCAGAGCTAACCATCTTCAGTCTATAATCATATTTGACTTGTGTTCATTGTCAGAGATTGCAACAGAAAAGTCTCCCATCATTGGGCTATGGAAGTTAACCCCCACTCTCTTTGACCTTCTAACCCAGTACATAAGTGCTTGTGAGTGGACAGTAGCAGCATGCTATCCTGCCGTGCAGTACACCATTCTACATGCATTGTATACCCATTGTCAAAGCAATGCCCATTTCTTGTCCAGTGTCAAAGATCCATTcaccatttcagaccaaaacaAGAAGGGAAGCTTAAGTTTcgttcttcatcttctttctAAAGTCCTCATTAGTTCTACTTCATCATATGATACCAGGAAACTGTGTTTGGTATGGCTAATGGAGACGCTTGACTTAGTCTTCAAATCAGGACCAGAAATAACAGCAGCAGTAAAGGAACACTTTAACTTTGACATCTTAGGAAATAGTTTATTGCCACTGTCATTCAATCCATGTTGCCACTTTTCATTGGAAGTGTGCGAGTGCATGAAAATCCTCATTGAACTGAAGCTCCTGTCAGTCAACTGCCTCAAGAGATGTCTACAAGATTGTACAGTACGATTGATGGATGTCAATGATACTGTGCGGGAATGTTACCTGTCACTCATCAAGGCACTACCTGCTGACATTATAACAAGTTTTGCATCAAGGAACCTTTTACAAGACAGGATAAAGATGCAAAAGACAGCAAGTGATAGTGAATTTAAGCAGTTGACGACAAGTTGTGAGGATGTGTGGTGGGTCAAGAAGAATCACATTGTAAAACAACCAACTGGTACTTTTCATTCGTATAACTTTCAAGTTATAATGGGTTTTATTCAGCATGGAGTACTGCCAAGCAAAGAGATGCAAAGTGACTGGTTGGTTCGGCTTTTTCACACCTGTAATAGACCAAACAAATACACAGCAAGTGAACTGACCCATTTTAACAGCAGTCAGTCGGCCTTATGGTTCTGGTCCACCTGGGAAACAGCTCAGTTCTGTATCCTATCCAAACTGCGCACTTCTTTAGGAAGAGCACAAGAGACCTTTCAGGCCATTGAAGGAAGTCTGAACCAGTATGCTAAAGAGGCCAAGGCGGCAGATCAAGATGACCAGGCAAAACCAAGGAGCAAAGATGATAACAAGTCCAGCGATGAAGATAGTGAACCCACAGCAACCTTCCCTAAGGCATACATGAGTCAACTAAGAACAACTTTGCTGCTCCAATTTGTGGAAAACCTTGAGAAACTGATGTACAATGCATATGATGGTTGCACAGTAGGAATGCCGTCACCTCCCAAGTCTGTGCGAGTGTTCTTTAGGACAAATCGCAGCACCTGCCAGGAATGGTTGTCCAGGATTAGACTACCTGCAGTTGAAGTGAGTCTGCGATGTGGCTCACCAGCCATTGCTGTCTGGCATGGCATGCAGATGCTGCAGGAAATGAAAGCTTCTGGAAAACTGAAGGGTCCTGAATTTGAACAGACAGTATTACTATTGTGTAAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BKX6	Serine/threonine-protein kinase SMG1 OS=Mus musculus OX=10090 GN=Smg1 PE=1 SV=3
Q96Q15	Serine/threonine-protein kinase SMG1 OS=Homo sapiens OX=9606 GN=SMG1 PE=1 SV=3
C5J7W8	Serine/threonine-protein kinase SMG1 OS=Danio rerio OX=7955 GN=smg1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002224 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15785 all species →	SMG1	Serine/threonine-protein kinase smg-1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR050517 all species →	Family	DNA Damage Response and Repair Kinase	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR031559 all species →	Family	Serine/threonine-protein kinase SMG1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11139 all species →	ATAXIA TELANGIECTASIA MUTATED ATM -RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000184 all species →	Biological Process	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0016310 all species →	Biological Process	phosphorylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000015127.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.