Gene detail

Detailed information of ENSQPTP00000015171.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031571606.1, antigen WC1.1-like [Actinia tenebrosa]
Species Actinia mediterranea · all data for this species · gene families

Sequence

CDS

ENSQPTT00000018650

ATGAAGGCTTATTTCGTTCTCTTGACTTTGTGCTCTTTGGCAGCGATTCTGCAGGCTGAGTACGAAGATGGATATTTTCAAGAAGACTATGAAGAAGACTtttgGAATCATAATTCATCCACTACTCGACGTCCACATTGGACTACAAGAAATGTAGTATCGAATGCACCAATGACTCGATTTCCCACAACTGCTGGGCCTCAACTATATCAAGTGCGCCTAGTTAGAGGAAGATCCCGTTACGAAGGTCGTGTCGAGATCTACTACAGGGGACGATGGGGCACCATCTGTGATAACTCATGGGATTTGTACGACGCTCATGTTGTGTGCCGTCAGCTTGGGTTTTCCAAAGCCATTTCAGCTCCATGTTGCGGTAGATATGGATGGGGCTTTGGCCCAATATGGATGACAAATGTTCGCTGCCGTGGTTTTGAACGCTCTTTAGCCCAGTGTAGATTTACAGGTTGGGGAGTTAGTGGCTGTAGGCATTATGAAGATGCTGGTGTTATATGTGCGTGCGGAAATTTGACCTGCTTCAATGGAGGAACCCTCAGATGTTTTAATGATAGTCGCGAAGTTTGTTCTTGTCGTCGTGGCTACTATGGAAAACAATGCCAGTTTTATTGTGGTAGCCTGAACTGCTACAATGGAGGTACAAGTGTCTGTTCCAGTGGCAGAGCTGTATGTCGCTGTCGTCCTGGTTACCAAGGAAGACAATGCCGCTACGTGTGTCCAAGTTTGTATTGTTATAATGGAGGCACCCGTGACTGTTCTCGAGGAAGACCAACGTGTCAATGTCGCCCTGGTTTTTACGGGAGTAACTGCCTACACAGGTGTCGTCAATTAGCCTGTCAAAACAATGGCACAACCCACTGTTTAAATAGCGGTTCCTACTGCCGCTGCTCTTCTGGTTACTATGGAAAATACTGTGAACACGCTTGTGGAAGCATCAACTGTTATAATGGAGGTACACTTTTCTGCTCTGGTAAAACGTCTCTTTGCCACTGTCGCCCTGGTTACTATGGAAACCAATGTCAAAGCGCTTGTGGAAACTTGACTTGCTACAATGGAGGAACGCGTCAATGTGCTGCTAACAGTCCTTATTGTCATTGTCCTCATGGTTTCTATGGAAAACAATGTCAAAGTGGATGTACGCCTGTATTCTGTCACAACGGAGGAACACATTACTGTTCTGGAATCAGAAGCTACTGTCGCTGTCCTTCTGGTTACTATGGACGACAGTGTGAAAGTGGTTGTGGCAGGTGGGTGTGTTATAATGGAGGTAGCTATCGGTGTGTCGGTAAGAAAGCTATATGTGTGTGCCGACCAGGGTACTTTGGAGAACACTGCCAAAGTGGGTGCAACCAACGGATTTGCTACAATGGAGGTACTCGTTACTGTTCTGGTAGCAGAGCCTACTGCAGATGTCGCCCTAGTTTCTATGGATCACAGTGCAATTATGgaTGCAACGCGTTGACATGCCTGAATGGCGGAAGTCGATACTGCTCTGGCAATAGAGCTTATTGTCGTTGCCAACCTGGTTACAGAGGATTACACTGTCAAATTGgaTGTGGCTCTCTCACTTGCTACAATGGTGGTACTCGATATTGTGTCGGCAATTCGGCTCGATGCCGCTGTCCCGCGGGATTCTCCGGTAGACAGTGTCAATACGGTTTATCTACCACACCTGCTCCAACACCAAgACCTCAAGAAAATGTACTCAGAGTACTAATCAGGATGATAGGAGGTTTCAAGCAACTCCTTGTTTCGatCCAGGATATGATCAAACTTGGCCTTCCTAAAAGCGGGGCAATGGTTTACAAAAGACAAATCAGTTCACTGCTGAGCGATGTAGAAACTCGAGCGAACGACATTGGAGAATCAAACGATCCATTGACTCTCAAGGCTAAGCAAGATGTCCACGAAGTAAGGTCACGTGCTCATGTAATGCTCAAGAAAATGGATGACATCATCGAAAAGAAGTGA

Transcript

ENSQPTT00000018650

AGTGGATGGACGTGCTTAAATTTAGTTCTTAGACTCAATAATATATGCGATTAAGTTCCCATTTAACCCTAAGATATATTTGGCTCAAAATCTAAACTATGAGGAAAATGAAATGATGCGGTTCTAAAATTACGTTATCGATATCTTTAGCGCCTTGTAGGATGTTTTAACTGTGCAAGACAACACCTTTCGAAGTATTTCGAGGAAGGCTTTAATGCTGTAAGCGTCCTAGAATATGAAGGCTTATTTCGTTCTCTTGACTTTGTGCTCTTTGGCAGCGATTCTGCAGGCTGAGTACGAAGATGGATATTTTCAAGAAGACTATGAAGAAGACTtttgGAATCATAATTCATCCACTACTCGACGTCCACATTGGACTACAAGAAATGTAGTATCGAATGCACCAATGACTCGATTTCCCACAACTGCTGGGCCTCAACTATATCAAGTGCGCCTAGTTAGAGGAAGATCCCGTTACGAAGGTCGTGTCGAGATCTACTACAGGGGACGATGGGGCACCATCTGTGATAACTCATGGGATTTGTACGACGCTCATGTTGTGTGCCGTCAGCTTGGGTTTTCCAAAGCCATTTCAGCTCCATGTTGCGGTAGATATGGATGGGGCTTTGGCCCAATATGGATGACAAATGTTCGCTGCCGTGGTTTTGAACGCTCTTTAGCCCAGTGTAGATTTACAGGTTGGGGAGTTAGTGGCTGTAGGCATTATGAAGATGCTGGTGTTATATGTGCGTGCGGAAATTTGACCTGCTTCAATGGAGGAACCCTCAGATGTTTTAATGATAGTCGCGAAGTTTGTTCTTGTCGTCGTGGCTACTATGGAAAACAATGCCAGTTTTATTGTGGTAGCCTGAACTGCTACAATGGAGGTACAAGTGTCTGTTCCAGTGGCAGAGCTGTATGTCGCTGTCGTCCTGGTTACCAAGGAAGACAATGCCGCTACGTGTGTCCAAGTTTGTATTGTTATAATGGAGGCACCCGTGACTGTTCTCGAGGAAGACCAACGTGTCAATGTCGCCCTGGTTTTTACGGGAGTAACTGCCTACACAGGTGTCGTCAATTAGCCTGTCAAAACAATGGCACAACCCACTGTTTAAATAGCGGTTCCTACTGCCGCTGCTCTTCTGGTTACTATGGAAAATACTGTGAACACGCTTGTGGAAGCATCAACTGTTATAATGGAGGTACACTTTTCTGCTCTGGTAAAACGTCTCTTTGCCACTGTCGCCCTGGTTACTATGGAAACCAATGTCAAAGCGCTTGTGGAAACTTGACTTGCTACAATGGAGGAACGCGTCAATGTGCTGCTAACAGTCCTTATTGTCATTGTCCTCATGGTTTCTATGGAAAACAATGTCAAAGTGGATGTACGCCTGTATTCTGTCACAACGGAGGAACACATTACTGTTCTGGAATCAGAAGCTACTGTCGCTGTCCTTCTGGTTACTATGGACGACAGTGTGAAAGTGGTTGTGGCAGGTGGGTGTGTTATAATGGAGGTAGCTATCGGTGTGTCGGTAAGAAAGCTATATGTGTGTGCCGACCAGGGTACTTTGGAGAACACTGCCAAAGTGGGTGCAACCAACGGATTTGCTACAATGGAGGTACTCGTTACTGTTCTGGTAGCAGAGCCTACTGCAGATGTCGCCCTAGTTTCTATGGATCACAGTGCAATTATGgaTGCAACGCGTTGACATGCCTGAATGGCGGAAGTCGATACTGCTCTGGCAATAGAGCTTATTGTCGTTGCCAACCTGGTTACAGAGGATTACACTGTCAAATTGgaTGTGGCTCTCTCACTTGCTACAATGGTGGTACTCGATATTGTGTCGGCAATTCGGCTCGATGCCGCTGTCCCGCGGGATTCTCCGGTAGACAGTGTCAATACGGTTTATCTACCACACCTGCTCCAACACCAAgACCTCAAGAAAATGTACTCAGAGTACTAATCAGGATGATAGGAGGTTTCAAGCAACTCCTTGTTTCGatCCAGGATATGATCAAACTTGGCCTTCCTAAAAGCGGGGCAATGGTTTACAAAAGACAAATCAGTTCACTGCTGAGCGATGTAGAAACTCGAGCGAACGACATTGGAGAATCAAACGATCCATTGACTCTCAAGGCTAAGCAAGATGTCCACGAAGTAAGGTCACGTGCTCATGTAATGCTCAAGAAAATGGATGACATCATCGAAAAGAAGTGATGGACTCGAAAGATCGCTATTAATCGGACCAAAGTCGACCAATGAGTTAAAAACAGTGCTGTTCTAGTTGCTTAGCTTAATTTTTGCACCAATAGAGCAAAACCCTTTACTCCCTTTGTACTGTTGAGTTTGGCATTCAGTTAGCTTACGTAATCACAATATAAAGATAGATTACTTTACTTAGATTAACTGTCTTGATGCATGCATTGGGATCATTTGCCAAATGCCTTTTTAGTAATTAGGGAGAGGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P85521	Scavenger receptor cysteine-rich type 1 protein M130 OS=Bos taurus OX=9913 GN=CD163 PE=1 SV=2
Q2VLG6	Scavenger receptor cysteine-rich type 1 protein M130 OS=Canis lupus familiaris OX=9615 GN=CD163 PE=2 SV=1
Q2VLG4	Scavenger receptor cysteine-rich type 1 protein M130 OS=Chlorocebus aethiops OX=9534 GN=CD163 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000099 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00530 all species →	SRCR	Scavenger receptor cysteine-rich domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR036772 all species →	Homologous_superfamily	SRCR-like domain superfamily	Interproscan
IPR001190 all species →	Domain	SRCR domain	Interproscan
IPR017448 all species →	Domain	SRCR-like domain	Interproscan
IPR002350 all species →	Domain	Kazal domain	Interproscan
IPR050969 all species →	Family	Developmental Signaling Modulators	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14949 all species →	EGF-LIKE-DOMAIN, MULTIPLE 7, 8	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005102 all species →	Molecular Function	signaling receptor binding	Interproscan
GO:0005576 all species →	Cellular Component	extracellular region	Interproscan
GO:0009986 all species →	Cellular Component	cell surface	Interproscan
GO:0048856 all species →	Biological Process	anatomical structure development	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000015171.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.