Gene detail

Detailed information of ENSQPTP00000015510.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031569409.1, utrophin-like isoform X3 [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000019046

ATGCATATCAGCAATGTGGTCACTGACTTACAAGATGGAAGAGCACTCCTCTGCCTGCTGGAAGTCCTGACTAACAGAAAACTGaaaaaagaaaagggcaACCTCCGTGTTCACAAGATCAACAATGTCGAACAAGCACTAATTGTCCTTGATGAATGCAAAGTAAAGCTTGTGGGCATCAATGGGTTCGATATCGTGGATGGTAAAACTCGTGTCATTCTTGGTTTGATGTGGAGCATTATCTTGAAGTTCCAGGTTCAAGGAGTTATGCAGCAGACTGGTTCTGAGGAAGAGTCATCGAGGAGCTTTGCTGTTGAAAAACAACTTCTGGAATGGTGCAAAGAGAGACTGAAGGGATATGACATCAAGGTATCAGATTTCACAAACAGCTGGCGCGATGGCTATGCGTTCAACGCCGTTTTACATTCCTACAGAAAAGACGCATTTGATTTCGACTCATTGTCCCGGATGGATGATAAAAAAAGGCTGGACCACGCCTTCAACCAGGGAGAGAAAACGTTCGGCATTCCACGCATTCTCGACTCTTCAGATGTTTATGTTGAACGCCCTGACAAGAAATTAATCATCCTCCATGTATCCAACATGTATGACTATCTGGAAGGCAGCAAGGCTAAGGAGAGATCAGAGCAGGCTGATGTAGAGGAAGTAGTGGTTCAAGTTGATAATGACCAAGTTGAAGGCGCGCTTAAACCCTCATGGGACGAACTAGACTCAGCTTCAAGCAGATCACCCGAAGAAAGAGCAAGAGCTCTAGAAGAGATTGAAAGAAAACTGGACGATCTCGATGCAGCAGTTGATGACGCCGAAGATCGTAAACCTGTTTCTAAAGACAGCAATTTAGTGGATCTGGAGACGAGTAAAACACATTTGGACAGACACAAGAAATACATGCGTACCCTGGAATCCCTTGACAGCTGCAAGTACGAGGTGTTCGCTGAGGTCGAGCAGACAATCGATGAAGGATACTGTGAcgataaagaaaaagatgcATACTACGGCAGAATGAGACAAATTGATGAGAAGATCAAGGCTCTacgaaatgaagaaataaaagatttaAACAAAGTCTCTTCGAGCTACAATCTCTTTTTAAGCGAAAActtaaagaaaatagaaaagtctGTGGAAAACTCGGAAAAGAAAATCAAGTCAACTAAGGATGTCGCTAATGATTACGACACAGTGAACAAACAGCTGGAGGAGCACCAGGAATTCCAAGAGGAAATGGGTGACCCAACAGTCGTTAACACAATTTTAGAGATCGATGCATCTGATCCTAGCGTGGATAGTGCTACACGCAACAGACTGAAAGCCCTGAGTCAACGTTGGAAAGCCATCTGGGACTGGGCTGAAGACAGAAAGAAGAAGTCGATGAGTTCTTTGTCTGACTGGCAGAAGTTTAGAGATGAGGAATTGGTAGTACTAAATTGGCTTGGAGCAAAGGAAAAGGctttgaaagaaataaataaaactgatTTGATGGACGAGCAAGCCGCGAACAAAAGTGCCCAAGAACTTGAGAGAATTCAAAAGGAGCTTGTTGATGAAGAGCACAGACTGGATTATCTTCATGAATGTGGCGAGAAACTCAAACGAGAAGCTGGTGAAGACAAGGAAGCCATCAAGGACATTGACAAACAGCTGAAAGACTTTGATGATTGCTGGAATGATATCGTGAAGCAAGTGATCGATGGGAAAGAAAAGGTCAATAATGCGAGcaataaaatcaaagaaatgaaaaccaAAATGAAGGaagtgaatgaatggatggatgacgcCAGAAGCCTCATTGAGGACGTATCTGACGAAATGTCACCAGAAGACATGGACAAACTCAAGGACAAGGTCGAATTAAAATGCGACGAGCGCCCGCAGATTCAACTTCGTGTCCAGCGGGCTAAACGTCTATCCAACGATGTCATGCCATTGTTGAATCCCGAGTTTTCAAAAAAGCTGGTAAAAGAGGTGGAAGATTTCGAAGGAAAATGGAAAGACACCAATGCTGCTCTGGAGGGCTTTAGCGACAAGGGATACTCGGACGCAACGAGTGATTGCTGCCTTATGAGAGTCATCAAGAGAAAATTCAAATCAACTAATAACTAG

Transcript

ENSQPTT00000019046

ACTATCGTCGCACCTAATATATACTAATTCTATCGCTTCGTGTCAGGGAATGGCGAGCAAACGACCTGCAAAACCGCTTCAGAACTTCCGTACCGCAGCTATTGTTGCCAAACAAACTCAGAGATTTTCTTCAGGTCAAGAGATCACCACCCATGCATATCAGCAATGTGGTCACTGACTTACAAGATGGAAGAGCACTCCTCTGCCTGCTGGAAGTCCTGACTAACAGAAAACTGaaaaaagaaaagggcaACCTCCGTGTTCACAAGATCAACAATGTCGAACAAGCACTAATTGTCCTTGATGAATGCAAAGTAAAGCTTGTGGGCATCAATGGGTTCGATATCGTGGATGGTAAAACTCGTGTCATTCTTGGTTTGATGTGGAGCATTATCTTGAAGTTCCAGGTTCAAGGAGTTATGCAGCAGACTGGTTCTGAGGAAGAGTCATCGAGGAGCTTTGCTGTTGAAAAACAACTTCTGGAATGGTGCAAAGAGAGACTGAAGGGATATGACATCAAGGTATCAGATTTCACAAACAGCTGGCGCGATGGCTATGCGTTCAACGCCGTTTTACATTCCTACAGAAAAGACGCATTTGATTTCGACTCATTGTCCCGGATGGATGATAAAAAAAGGCTGGACCACGCCTTCAACCAGGGAGAGAAAACGTTCGGCATTCCACGCATTCTCGACTCTTCAGATGTTTATGTTGAACGCCCTGACAAGAAATTAATCATCCTCCATGTATCCAACATGTATGACTATCTGGAAGGCAGCAAGGCTAAGGAGAGATCAGAGCAGGCTGATGTAGAGGAAGTAGTGGTTCAAGTTGATAATGACCAAGTTGAAGGCGCGCTTAAACCCTCATGGGACGAACTAGACTCAGCTTCAAGCAGATCACCCGAAGAAAGAGCAAGAGCTCTAGAAGAGATTGAAAGAAAACTGGACGATCTCGATGCAGCAGTTGATGACGCCGAAGATCGTAAACCTGTTTCTAAAGACAGCAATTTAGTGGATCTGGAGACGAGTAAAACACATTTGGACAGACACAAGAAATACATGCGTACCCTGGAATCCCTTGACAGCTGCAAGTACGAGGTGTTCGCTGAGGTCGAGCAGACAATCGATGAAGGATACTGTGAcgataaagaaaaagatgcATACTACGGCAGAATGAGACAAATTGATGAGAAGATCAAGGCTCTacgaaatgaagaaataaaagatttaAACAAAGTCTCTTCGAGCTACAATCTCTTTTTAAGCGAAAActtaaagaaaatagaaaagtctGTGGAAAACTCGGAAAAGAAAATCAAGTCAACTAAGGATGTCGCTAATGATTACGACACAGTGAACAAACAGCTGGAGGAGCACCAGGAATTCCAAGAGGAAATGGGTGACCCAACAGTCGTTAACACAATTTTAGAGATCGATGCATCTGATCCTAGCGTGGATAGTGCTACACGCAACAGACTGAAAGCCCTGAGTCAACGTTGGAAAGCCATCTGGGACTGGGCTGAAGACAGAAAGAAGAAGTCGATGAGTTCTTTGTCTGACTGGCAGAAGTTTAGAGATGAGGAATTGGTAGTACTAAATTGGCTTGGAGCAAAGGAAAAGGctttgaaagaaataaataaaactgatTTGATGGACGAGCAAGCCGCGAACAAAAGTGCCCAAGAACTTGAGAGAATTCAAAAGGAGCTTGTTGATGAAGAGCACAGACTGGATTATCTTCATGAATGTGGCGAGAAACTCAAACGAGAAGCTGGTGAAGACAAGGAAGCCATCAAGGACATTGACAAACAGCTGAAAGACTTTGATGATTGCTGGAATGATATCGTGAAGCAAGTGATCGATGGGAAAGAAAAGGTCAATAATGCGAGcaataaaatcaaagaaatgaaaaccaAAATGAAGGaagtgaatgaatggatggatgacgcCAGAAGCCTCATTGAGGACGTATCTGACGAAATGTCACCAGAAGACATGGACAAACTCAAGGACAAGGTCGAATTAAAATGCGACGAGCGCCCGCAGATTCAACTTCGTGTCCAGCGGGCTAAACGTCTATCCAACGATGTCATGCCATTGTTGAATCCCGAGTTTTCAAAAAAGCTGGTAAAAGAGGTGGAAGATTTCGAAGGAAAATGGAAAGACACCAATGCTGCTCTGGAGGGCTTTAGCGACAAGGGATACTCGGACGCAACGAGTGATTGCTGCCTTATGAGAGTCATCAAGAGAAAATTCAAATCAACTAATAACTAGGAATTATTTAAGAAAACTAGAAACTAATACACAAACATAAGGTTTAAAACCATtgtctaaaaatatatattaaatcaaGGTTATTTTTCGTTCTGGGGTCCCGAGAAAAGAATGGAAGGGAAGTTACTAGGCTGCATGGAATACAAGAACTGCCATTAAATTCAATTTGGGTTAAAGTCGCTATAGAAGATTTGCATCATCACGCGATGGCAGCCATCAAGgagaaaaaacattaaagtattatattttcccAATGGGAAACTTACTTATTTCTCGTATAAACCAAATTATACCAGATTTAAATTTTCCCgactcctgtcatggctgccgtgGTGCAAAGACTCTATGAAACTTTTTTTATGCACCTCGGGAAGAGAAACTGGATAATATCATTTACAAACTGAGTGTCGATGGCTCTGCAGAGAACTGTGGGGGAAACAAATATGTGCATTGTTACCGCTCAAATAAATACTTGTATACGGTTTAAAACGTGTAACAAACATACCTTTCTTAAGTGCAATGCTCCGGAATATTCCATATCTTTCTTGATTAAATTAATCACATTCTCCTGCTGTAAAACCTCTCAAAACTAAACTTAAAGACAGTAATTCGAAATGTACGTACCATCAATAGATTCAGTAAATGTCCTCTGAGGCCACaggtatccgcaaatttttgtatccacaaattatttttttgcggatacgaaaatgtttgcgtccacacgcagcgttttcgaatcgtttgc

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P46939	Utrophin OS=Homo sapiens OX=9606 GN=UTRN PE=1 SV=2
G3V7L1	Utrophin OS=Rattus norvegicus OX=10116 GN=Utrn PE=1 SV=3
P11530	Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001145 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00307 all species →	CH	Calponin homology (CH) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001715 all species →	Domain	Calponin homology domain	Interproscan
IPR036872 all species →	Homologous_superfamily	CH domain superfamily	Interproscan
IPR018159 all species →	Repeat	Spectrin/alpha-actinin	Interproscan
IPR001589 all species →	Conserved_site	Actinin-type actin-binding domain, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11915 all species →	SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003786 all species →	Molecular Function	actin lateral binding	Interproscan
GO:0005826 all species →	Cellular Component	actomyosin contractile ring	Interproscan
GO:0030036 all species →	Biological Process	actin cytoskeleton organization	Interproscan
GO:0030054 all species →	Cellular Component	cell junction	Interproscan
GO:0030864 all species →	Cellular Component	cortical actin cytoskeleton	Interproscan
GO:0032432 all species →	Cellular Component	actin filament bundle	Interproscan
GO:0042995 all species →	Cellular Component	cell projection	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan
GO:0051017 all species →	Biological Process	actin filament bundle assembly	Interproscan
GO:1903478 all species →	Biological Process	obsolete actin filament bundle convergence involved in mitotic contractile ring assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000015510.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.