Gene detail

Detailed information of ENSQPTP00000015550.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031554366.1, nuclear migration protein nudC-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000019094

AAAGATAAATAGCCAAGAATGTTGTCCAAAAGAATGACCACAGACTAGAACATGTCGTAATGAAGCTTTGCGCTTCACATAATAATTTCTCATCATTCCCATGTGAGCTCATAAGAACAGAAAACATGTTACCAAAAGCTGTAAAGAAATCCGCGATCGAGATGTAGACTAAAATCTTACGAGGAGAAGAACGTATCTCTCGCCATGTAATaTTCCATTAGAATGAGTGTTCCGGAGTCAGAACGGTTCGATGGGATGCTGATGGCCATGGCACAGCAGTGTGAAGGAGGAATTCATGAGTTGTTGGATCATTTCTTTGGTtttctggaaagaaaaacagactTTTTTGTTGGTGCTCAGAAAGGTTCAGCAGAAAAAATAGTCACTACAAAATTTCATGAATATGAGAAGAGAGCAGTTCAAaaaaaagaaaaagagcaaAGAGAAGCAGAGGCATTGAGAGCTGCAAAAGCAAAGAAAGCTGCTGAAGAAACTCAACCCAAAATACAAGAAGTAACTGAGGaagaagcaagaaaaataaaagaggaagaagacaaaaagaaaaaacaagaaaaagtaGAAGAGAGTGAAgataaacaagaaaagaaagagGAAGTTAAAAATGGAAAAGATGAGGATGGAGAAGAGGAGGATGAGGATTCTAAAGGAAAGTTAAAACCAAATGCTGGCAATGGTGCCGACCTTCCAAATTATAAATGGACACAGACTCTCCAAGAAGTTGAGATTAAAATACCCTTGAAGGTGGATTTCAAGCTTAAAGGAAGAGATATTGCAGTCAATATACaacaaaagCACATCAAAGCTGGGCTCAAAGGCCATCCACCAATCATAGATGGAGAATTACCAAAAAAGATCAAGATTGAGGAGTCGATGTGGACTCTGGATAATAAACTGCTCACTATATCCATGGAAAAGGCTAACCAGATGGAATGGTGGTCACAGATCGTCACTACAGACCCAGAAATTAACACCAAAAAAGTTCAACCAGAGAATTCCAAGTTGGGAGATTTAGATGATGATACTAGAGGCATGGTAGAGAAGATGATGTACGACCAAAGACAAAAACAGATGGGTCTTCCTACCTCAGATGAGCAAAAGAAACAAGATGTCCTCAAAAAATTTATGGAACAGCATCCTGAGATGGATTTCTCCAAAGCCAAATTCTCATGACAATATTAATGTTAAAGAGAACACTTGTTGGTAATCATGAAGAAAAGAAGTAGCTTGCACTGCACATGATAAAGACTTGTTGAGGTACTTAATTCCTAGGAAGTTTTAGGGAGAAAATTAAAGACAAGACTGTAGACTGTTGTATCTTGATAATATTGTGCTGCAAATCTGTACTGGGTATGAGTGGGAGGGAAGTAAGATTCTTTTTAGAACTGCTCAAGTGTGATGGCATTGTTTGATTGGAGGAAATGCAGGTAAAGATTCCACCTCATGTAACAGGGTAGTTTGGTAGGAGAACTAGGACGGGAGTATAAATCTTTTCAAAGACTGTGCGAGTGCAAGAGTATTGTTTGGATGAGATCTACAATACATGATTAGAAAGATCATTAGAAGGTATTCAGTATTAatcatttgcttttcttaAATGTGGTACTGGTTCTAAAGAATGGAATAAAACTTTATGTATACTTAACTCTGACACTAACTGTACATGTACTAATATTAATGTATTGAACCACCACCCACCCTCCCCCATTTGTagatgatttctggaactacttCATGACGTTTCCATTGTCATTTTCCTTTATACTCTTGGATACATGATGCATAGAAGCAAGTTATTTTTATGGGTTTAATTACTCAAACGTGTCCTGGCACTCTTATGCTTCTCTTgattatattaaaaatgatTCCAAATATTTATATTGCATTAAATTTGTactttccatttttttatcgttattaaaaaacactttatttcaattttacattttcttagggaccattcattttttttaccagGGAGGAGGTGGGGTCATTAAAGGTTCAAGggggatccagggggggggggggggggggcacacAAAAATCTGAGTCGCACAGCACTTAAGCAATAAACAGAATGGATAACAAGGAATTAAGGGAAATCCCAGTGCTCCTTCCCCT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5ZIN1	Nuclear migration protein nudC OS=Gallus gallus OX=9031 GN=NUDC PE=2 SV=1
O35685	Nuclear migration protein nudC OS=Mus musculus OX=10090 GN=Nudc PE=1 SV=1
Q63525	Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001876 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14050 all species →	Nudc_N	N-terminal conserved domain of Nudc.	Family	Interproscan
PF04969 all species →	CS	CS domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037898 all species →	Family	NudC family	Interproscan
IPR025934 all species →	Domain	NudC N-terminal domain	Interproscan
IPR008978 all species →	Homologous_superfamily	HSP20-like chaperone	Interproscan
IPR007052 all species →	Domain	CS domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12356 all species →	NUCLEAR MOVEMENT PROTEIN NUDC	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006457 all species →	Biological Process	protein folding	Interproscan
GO:0051082 all species →	Molecular Function	unfolded protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K25866	NUDC; nuclear migration protein NudC	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.