Gene detail

Detailed information of ENSQPTP00000015720.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: CAH3129639.1, unnamed protein product [Pocillopora meandrina]
Species Actinia mediterranea · all data for this species · gene families

Sequence

CDS

ENSQPTT00000019295

ATGCATATCACGAGCATTCGAAACAAATGCCTTCACGTTACATTTGGCAAAGGGCGCTTTCGGTTCAATTTTAACCCTGTGGTTACCATAGTCTCTGCCCTTTTGATTTGGGTGTTTGTGATCCTCTGCCTTACAGAGACAGCCATAATATCCGCTGAAATGGTAAAATGGATGAAATGGGTGACCAAAACATGGACATGGTTGTACATAGGAACACAAGATGTGTGGGCTTTCTTCTTGATCTACttatatttcagcaaatacTCCCAAATCAAGCTGGGAAAGGACGACGACAAACCGGAATTTTCTGACTCAACCTACTTTACAATGCTGTTTGCTGCTGGTATCGGAACAGGGATGTTTTTCTATGGCGTGGCGGAACCTGTCTATCACTATGCCCCTGGAGGAGAATGGGGTAACCGTTATCAAGGAAGATACTCTGACAACCAAAAGGCTCAAGATGCCATAAACCTGACCATCTTCCATTGGGGCGTACATGGTTGGATAGTCTACGACCTGGTCGCTCTAGTCCTCGGCTTCCTCACCTTCCGTAGAGGCTTGCCTATGACAATGAGATCGTGCTTCTATCCACTGATTGGTGACAAGGTTTTTGGGATTTTCGGCGACGTGATTGACATCCTGACTGTCGTGTGCACCATGTTCGGCGTATGTACCAGCCTGGGTATCGGCGTCTTGTTGATCAACAGTGGTGTACATCGATTGAATGACAACATAGGGGTAAACAAGAATAACCAAATCATCCTGATTTGGGGCATCACTATATTGGCAACACTCTCCGTGGTTAGCGGTCTGAAGGTTGGGATCCGCCGTTTGAGTGAGATTTGTTTTACCCTTGGGATGTTCCTTTGGTTCTATGTGTTATTCGCAGATGACACTTGGTACCTTCTGAATGTCTTTGTCCAGTCTCTTGGTTATTATCTGCAGTGGCTGGTGCAGCTGGGCTTCCACACCGATGCCTTTGCACAGCTTGGAGACGCTCCTGACAAGAAGCAAGCACCaggatggatgaatagctGGACAGTATTCTACTGGGGATGGTGGATCGCTTGGGCGCCTCTTGTTGGTATATTTATCGCCAAGATTTCCAGAGGGCGTACCATTCGATCGTTCATCACCTACACCCTCACTATCCCAGTCGTGTATTGCCTGATGTGGTTTTCTGTGTTCGGTGGCGCAGGTCTACGTATGGAAAGAGCAGCACAGAATGCCAATTTAACTTGTGGTGTGAATGCCACGCaaacagatggaaccctgtaCCGTCTATCGTGCCGATCAAACGGAGGAGACATGTGGTTCGATGTTATCTTACAATATGGTGGAAGTGCAGAATTCCTGTCCGGGATATCCTTGGTTTCGATGGTTCTCTACTTTGTGACCAGCTCAGACAGTGGTTCTCTTGTAATCGATAGCGTTACGTCCAACGGTCACCCAGATCCACCGGTCATTCAAAGGATTTTCTGGGCGTTGACCGAAGGAGCAGCCGCAACAGCACTGGTCGCCGCCGGCAGCAGAAAAGCCATGGACGCCTTGCAAGCTGTCTCCATCTGCTCTGGGCTTATCTATACATTGGTCATCAACTTCGTATGTGTTGCGCTATGGAGGACGCTTAAGATAGAAGCGGGTGACATGGATCCTAATGGACCCCATTTCAGTACCGGTCTGTTAGATTACATTTATAACCTAACCTCCTGTAAAGCGTTTGGGCGTTTAATACTGGCTGTGTTTGCTCCCTGGTGGTCAGCTGGTAACGCCGCAGGAAAGCTGTCCCAATACAAGCGCATTGTGGCCATGGTTTTTGTGGCTTTGCCGTTTTATACCTGGATTATGCTGGAAATTTTCCAAGTTTTTGATAAGACCTGTATGTATATCGGCTGGGCCATCTACATGGGGTTCGTGGCGTACGGTACGGGTATTCGAGCTTCGATAAGAGAAAAGTTCCATATTGATGGTAACCTCGTCGAAGACATGTTTGCTATGATGTTGGTGTATCCATTGGCTGTACTACAGATGGAGGACCACATGAACAAGAACATCTACGACGATGCTTCGAGAACAGTTTCATCCTCTATGCACCAACCAATTGCATCTCGAGGATTTTACGATACCCAGCGAACTAAAACTCATAAAACGGACTATGGAAACCGTTATCAAGGAAGGTATTCAGATAACCAGCGTGCACAAGATGCCTTAAATGTGACTATTTTCCACTGGGGTATACATGCATGGGTGGTCTATGCTCTCGTTGGACTCATCCTCGGATATTTATCCCACTGTAAAGGCATGCCCATGACCATGAGATCATGTTTCCATCCTCTTCTTGGTGACAAAATCTTTGGTACACTTGGTGACTTCATCGACATCCTGGCCGTTGTCTGCACCATGCTTGGTGTTTGCACTAGTCTTGGTCTCGGGGTCGTACAACTTAATAGTGGTTTCAACCGCATGAATAACAACATTACTCAGAGCAAAGAAACCCAAGTTATCATCATCTGGTGCATCACTGCCTTGGCCACTGCATCTGTTATCAGTGGCCTCAAACTGGGTATTCGTCGTCTGAGCGAGCTCTGTTTCTCTATTGGCATGTTACTGTGGTTTGTGGTCTTCTTCTACGATGACACTTGGTACATTCTGAACGTCTCCGTGCAAACCCTTGGCTACTACATGCAGCAGCTTGTGCAGCTGGGCTTCCATACCGATGCCTTTGCACAGCCTGGAGACGCTCCTGACAAGAAGCAAGCACCACAATGGATGAACGACTGGACCATCTTCTACTGGGGATGGTGGGTCGCTTGGTCACCTTTCGTTGGTACCTTCATTGCAAGAATATCCCGTGGACGTACCATTAGAGAGTTCATCATGTACACTCTGACACTCCCCACAATATATTCTCTGCTGTGGTTCTCTGTATTTGGTGGTGCAGGTCTACGCATGGAGCGAGCAGCAGCCAATGCAAATATCACTTGCACCTCTCCACTGGGTGGATGGAATTCGACTGAGTCCCTTGGAGGTCTGTACCGGCTCTCCTGCCGTCCTTCTGTCAACATGTGGTTTGACCTGATGGACCAATATGGCGGTCTTGGGGATTTCCTGTCAGGCATGTCCATCGTGGGTTTAATCCTGTACTTTGTGACCAGCTCAGACAGTGGTTCTCTGGTGATTGACAGCTTATCAGCCAATGGCCATCCAGATCCACCGGTACTTCAAAGGATCTTCTGGGCGCTGACCGAAGGAGCAACTGCTACAGCTCTTCTCTGGACAGGTGGTACCAAGGCTCTTTCTGCTCTCCAAGCAGTTTCTATTGCCTCTGGACTCTTCCTCACGGTATTACTCAACTTTATCTGTGTTGCTTTGTGGAGGATTTTGAAGACCGACGTTGGTGACCTAGATCCAAATGGACCACAGTTCACTATGGGGCTACTAGATATCTTCTACCGTCCCTCTTGCAAGCTATTTGCCAGACTTGTCGTAGCAATCTTTGCTCCATGGTGGCCATTGGGTAATGCTACAGGAAAGTTGTACGGCTCTAACCGTTATGTCTCAATGGTGTCCTTGGCTATTCCTTTCTATGGCTGGATCATTCTAGAGATCCTACAGGTGCTTGAGCCTGGTTTGGCGTACGTGGGCTGGGCTGTATTGTTCGGCTTCTTTGCGCTAGCCACTGGTACTCGCGCTTACATGAGAGAGAAGTACAACATCCTGGGTAACCTTGCTGAAGATTTCTTTTCTGTGATGTTGGTTTACCCGCTAGCAGCCTTGCAGATGGACGAGCAGATGAGAGGTGGGCAATTTCATCATGATGAGAAATTTAACGCCGCAGAAACCAACATGGCGCTTGACGAAATGGAAAAGAACCCTGATGCCTTGAACGGTACATACAAGAGAAAATCATCCGTCGTGTCTTGA

Transcript

ENSQPTT00000019295

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q87NG3	Glycine betaine transporter 1 OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=VP1905 PE=1 SV=1
Q6F754	Glycine betaine transporter OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) OX=62977 GN=ACIAD3460 PE=1 SV=1
P9WPR6	Uncharacterized transporter MT0942 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT0942 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000591 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02028 all species →	BCCT	BCCT, betaine/carnitine/choline family transporter	Family	Interproscan
PF04749 all species →	PLAC8	PLAC8 family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018093 all species →	Conserved_site	BCCT transporter, conserved site	Interproscan
IPR000060 all species →	Family	BCCT transporter family	Interproscan
IPR006461 all species →	Family	PLAC8 motif-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR30047 all species →	HIGH-AFFINITY CHOLINE TRANSPORT PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:0071705 all species →	Biological Process	nitrogen compound transport	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006810 all species →	Biological Process	transport	Interproscan
GO:0016021 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000015720.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.