Gene detail

Detailed information of ENSQPTP00000015740.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031567791.1, muscle-specific protein 20-like isoform X2 [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q24799	Myophilin OS=Echinococcus granulosus OX=6210 PE=2 SV=1
Q3KQW7	LIM and calponin homology domains-containing protein 1 OS=Xenopus laevis OX=8355 GN=limch1 PE=2 SV=1
Q9UPQ0	LIM and calponin homology domains-containing protein 1 OS=Homo sapiens OX=9606 GN=LIMCH1 PE=1 SV=4

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000602 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00307 all species →	CH	Calponin homology (CH) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001715 all species →	Domain	Calponin homology domain	Interproscan
IPR036872 all species →	Homologous_superfamily	CH domain superfamily	Interproscan
IPR003096 all species →	Family	Smooth muscle protein/calponin	Interproscan
IPR050606 all species →	Family	Calponin-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47385 all species →	CALPONIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0007015 all species →	Biological Process	actin filament organization	Interproscan
GO:0015629 all species →	Cellular Component	actin cytoskeleton	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20526	TAGLN; transgelin	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.