Gene detail

Detailed information of ENSQPTP00000016577.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031571859.1, GTP-binding protein 1-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000020293

GTCTCTTAAGAAGTTCAGCATTAGGATCTAATAACAACTGAGCGTAGATCAAATATCCTCGCTTCAAGATAATGACTACTGGAATCAAGTTTTCCTAAAAAATCCTAAAATTTATCAGGAATAAATAGCAAGAATGAGTGCCGCAGCAGAATCCATCAACGTGCAAGAAAAACTCTCCTCTGGAGTGCTACCAGAAAAGAATGAACTCAATCACTTACAAAATGGAGCTTCCAATCTCTTTGCTCCTGATTCTGACCAAGGAATATTTTATGATGAAGAAACTAATGGTGTTAATGATCTTCACGATCCAAGGttgGCACTCGTTTCTCCAGATGAAATACAGTTTGATCAGTTGTTAAAGAAACTAAATCAAAGACTAGACAATGGACATGGAGAGACAATCTTTGAAGTCGGAGCAGGAGATGGAACAAGCAGTGGTCTTAATAAAGAGGATTACGAAGCATCTGTAGCAACACTCAAGACTCTTGCACAGTGCTGCAATGCTGATATGGTCCTACTAAGAGAGAAAAATGCTGAACAAGGAAAAGTGGGAGAGTTTTTAATAAGGAAAAAATTGGAAGAGAATGACTTTATGGAAGTCagAGTGGCAGTGGTTGGCAATGTTGATGCAGGAAAGAGTACATTACTGGGTGTACTAACCCATGGTGAATTAGACAATGGGCGTGGCATGGCTCGGCAGAGGTTATTCCGTCACAAACATGAAATGGAATCAGGAAGAACCAGTAGTGTTGGGAACGATATTTTAGGCTTCGATGGAGAGGGAAAAGTTATGAATAAGCCAGAAGTACATGGTGGACAAGATTGGTTAAGAATCTGTAAGAAATCTTCAaagGTTATAACATTTATTGATCTTGCTGGTCATGAGAAGTACTTAAAAACAACAATATTCGGCATGACTGGTCATGTACCAGATTTTGCAATGCTTATGGTTGGGTCCAATGCTGGAATCATTGGAATGACTAAAGAACATCTCGGTCTTGCTTTAGCTCTAAACGTACCAGTATTCGTTGTTGTGACCAAAATAGACATGTGTCCACCAAATGTGCTACAAGAAACAATGAAACTCTTGTCAAGAATTCTAAAATCCCCTGGTTGTCGTAAGATACCCGTTATAGTGCAAAACAGCGATGATGTGGTTGTATCAGCAACGAATTTCATGTCAGAAAAAGTTTGTCCTATCTTCCAAGTTTCAAACGTCACAGGAGAAAATCTTGACTTGTTGAAGATGTTTATGAATCTGCTGAGCGTCAGAACAGAAAGTCGTGACGAAGAGCCAGCAGAATTCCAGATAGATGATACCTACTCTGTTCCAGGCGTAGGGACCGTGATATCAGGGACATGTATGCAAGGGATCATCCGGTTGAACGACACAATGCTCCTAGGCCCAGACCCTCTTGGTCAGTTTCAACCTATTGCTATCAGGAGCATCCACAGAAAACGAATGCCAGTGAAAGAGGTCCGCGGAGGGCAGACGGCTTCGTTCTCTTTGAAAAAGATCAAGCGATCGCAGATTCGCAAGGGCATGGTGATGGTCGATAAACGGCTCAAACCTCAGTCGTGTTGGGAGTTTCAGGCAGAGGTGCTGGTTCTTCACCATCCAACTACAATCAGCTGTAAATACCAAGCAATGATTCACTGTGGCAGTCTACGTCAAACGGCAACCATCATCAGGATGAGCCAACCTCATTTGCGAACCGGCGACAAAGCGACAGTAACATTCCGTTTCATCAAACACCCAGAATACCTAAAGCTAAACACCCGAATGATTTTTAGAGAAGGAAGAACAAAAGCTGTTGGGACCATACTTAGAACAGACCCTGACGCACACCCACCCCCACAGGTCGCTGGAAAAATTAAGCACCGGGGGACTGGGAGAGCTCATACTCATGGTTCACGTGATAGAGGGAAAGAAGAAGTCAGCGGTACGACTCATACGAAGCATGCGTCTACAACCACAAGTTAGCATAAAAATACAGGGGAACGTACTTGAGTGGAATAAGTTATATACGTTAACACCCCTAGAACGCAAAAACTGTTGAGTTAGAAACGAAGTAGGAAAGGTTGAAAGTTTCTCATTCGGATAAGATCGACTTGGCTTAAGTAGTTATCACGCAATGGAGAACTTATAAGTATATGACATCGTAAAGTATTATTGAAGGATTTTTAACATCAAGAGCATGATATCTCGCACGCAAGTTATTATGCTGAAAGCTGAATGTGCGTTTTTAAACGAAAGTTGTCTTATTGAATGTATTATagagaagagagaagaaacaggagaaaccaagaaaaatgaaataaatgataGTACTAAACTgcatattttgcattgtttcttggtttttattcttttattgaaGACCTACGCCTTGTAAAAAGACAATAGATAGATAAAAAACAGgaatcttatttattttatcattttagcATGCTGAGTTGTTCTTTTATGTTCCTGCGTGTAGTGTGTGAGgtgaatttgaaaaagaaaaggtaaaACAATATGCGTAATGCCCATAGAATGTGCTTATTCAGGTTGATACTCAACCCAAATGTGCACAGTATTCTCGGTATTgcgtttattttgttttacttaAATTTTTTGGTCAAAGAAAGAAGTGCATGtataagagaaagaaagaaaaaagaagagaaagagaaaagaaaagaattgaAAGATAAGAAAGGCGGAAAGGAAGAGAGGAAAGTAATAAaagatgaaaggaaaaaggaaGTAGATGAATAGGAAGTCAATCAGAATACATGACGAAttaaggaaagaaaaataaattgaataaaagagaagagaaacgATGACCATATCGAGATTGGGTGTCCTGTGGTTGCATCGCGTGACGTCTTCTTCAGGTCACGTGTCAAATAGCATTACCCATAATCCCTAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5XGS8	GTP-binding protein 1 OS=Xenopus laevis OX=8355 GN=gtpbp1 PE=2 SV=1
D2XV59	GTP-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gtpbp1 PE=1 SV=1
O08582	GTP-binding protein 1 OS=Mus musculus OX=10090 GN=Gtpbp1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001872 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00009 all species →	GTP_EFTU	Elongation factor Tu GTP binding domain	Domain	Interproscan
PF03144 all species →	GTP_EFTU_D2	Elongation factor Tu domain 2	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035531 all species →	Domain	GTP binding protein 1-like, GTP-binding domain	Interproscan
IPR009000 all species →	Homologous_superfamily	Translation protein, beta-barrel domain superfamily	Interproscan
IPR000795 all species →	Domain	Translational (tr)-type GTP-binding domain	Interproscan
IPR009001 all species →	Homologous_superfamily	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR050055 all species →	Family	Elongation factor Tu GTPase	Interproscan
IPR004161 all species →	Domain	Translation elongation factor EFTu-like, domain 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43721 all species →	ELONGATION FACTOR TU-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0003746 all species →	Molecular Function	translation elongation factor activity	Interproscan
GO:0006414 all species →	Biological Process	translational elongation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24887	GTPBP1; GTP-binding protein 1	-	Translation factors	ko03012	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.