Gene detail

Detailed information of ENSQPTP00000016640.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031572293.1, plastin-2-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000020363

GACTCTGTTGTGTACAGCTATCTTCTCAGCCAAATTGCACCACCCGGATCAGGAGTGGATAAGCCTAACACATACAACTCTGTAAGTCATAATGATGATCAATGGCCAGGGGGGATAAGCCTAACACATACAACTCTGtaagtaataatgatgatcaaGGGCCAGGGGGGGATAGGTCTAACACATACAACTCTGtaagtaataatgatgatcaaTGGCCAGGGGGGATAGGTCTAACACATACAACTCTGTgagtaataatgatgatcaaGGGCCAGGGGGGGATAGGGCTAACACATACAACTCTGtaagtaataatgataatcaaGGGCCAGGGGGGGATAGGTCTAACACATACAACTCTGTgagtaataatgatgatcaaGGGCCAGGGGGGGATAGGTCTAACACATACAACTCTGagagtaatgatgatgatcaagggCCAGGGGGGTATAGGCCTAACACATACAACTCTGTAAGTTATAATGTTCACACTTATGTAATCCAGATTAGAGATCCACTAAAGAAAGCTGGCAAAGTGTTAGATAATGCTAACCGCCTTGGATGCAGGAAGTTTGTTAGAGACAGGGACATTGTTGAAGGCAACCAGAAACTAAACATGGCATTTGTGGCCAATCTTTTCAACACCTATCCTTGTCTACCTCCAATGGATGTTGAAGAAAGTAAAACACAAGTTGAAGATGAGAACCTCTACAGAGAAGAAACTCGTGAAGAACAAACATATCGTAACTGGATGAACAGTCTTGGAGTTGATCCATTTGTAACTTGGTTGTACACAGATCTCTACGATGGTCAAGTTTTATTTCAGCTGTATGATTCCATTAAAACTGGCATGGTTGACTGGGATCGTGTATGTACAAGAGAAGATTGCAAGAAATTAGGTGGAAATATGAAAAAGATTCAAAACTGTAACTATTGTCTGGAACTCGGAAAGAGTTTGAACTTCACGCTTGTTGGAATTGGTGGTCAAGACATTAATGCTGGAAATGAAGTCTTGACTCTTGGACTTGTGTGGCAAATGATGAGAGCTTACACTTACTCCATCCTGACAAAGCTTGCTCCTGAAGGCAGCCCACGACTGAAAGATAACGACATCATAGAGTGGGTTCAGGAACAGCTTGCAAAGGGCAAGAAATCAAGCACAATCAAAAGCTTCAAGGACCCAAGTATTTGCACCAGCCTTGCTGTGATTGACCTTATTGATTGTATTAGCAGCAAAGTTGTCAATTATAATCTCGTGACTCCAGGAGAAACCGATGAGgaaaaGTTATTAAATGCCAGGTATGCCTTAAGTCTGGCAAGAAAGATTGGTGCACAGATCTATGCCCTTCCTGAAGATCTCGTGGAAGTGAAACCTAAGATGGTTCTGACAGTATTTGCTTGCCTTATGGCCTGTGCAtacaaaaacacaaaacaaaaggaatcaaaaaagaaacaagtcaaaaagtaaaacatTTTGTCTGATAGGGTTGACTAGAGCATGGTTTATAAGTAGGTATTTCTAACATTAATAATTGAATTTGGATCCTGTCATACTTTACGAGGTCAATCCTGATTTGATAAGCATTTTTCTGTGTTGTGTGATATAAAGCAAAATTTTTGCAATTAGTATGAATATGCCATACCCAAGCTTTTGTTTCAGTTTATGCATTTACAAATTGTTTATACTAAAAAAATAAGTAACTAAAATAAGATGAAAGTCGTTCGTGAACAGATATGGATATATTCACATTTCAAAACACTGTATTAGTCATTGTAACTGTATAACCCTAGAATAATGCCATACAATCTGGTCAATCAATCACTTATTGGGTGTAGTAATTAGGTTTATATATGACAAGCAATACTTTATGAATTGTTAGATACAAGCAAATATTTTCAAGGTTTTCTGTAATTAACAAGAATGTTATTGATAAACACAAATATAATTTGATAAATAGGAATCAAAGTAAATAAAGCTTTAGAAATAAACATTTGTCTTTAATTCCACTGCATTTCACATGATTTCAGGCGGCGCACATtgaagtaatatatacagtatgagtggcc

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P13796	Plastin-2 OS=Homo sapiens OX=9606 GN=LCP1 PE=1 SV=6
Q61233	Plastin-2 OS=Mus musculus OX=10090 GN=Lcp1 PE=1 SV=4
Q3V0K9	Plastin-1 OS=Mus musculus OX=10090 GN=Pls1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001622 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00307 all species →	CH	Calponin homology (CH) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001715 all species →	Domain	Calponin homology domain	Interproscan
IPR036872 all species →	Homologous_superfamily	CH domain superfamily	Interproscan
IPR039959 all species →	Family	Fimbrin/Plastin	Interproscan
IPR001589 all species →	Conserved_site	Actinin-type actin-binding domain, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19961 all species →	FIMBRIN/PLASTIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005884 all species →	Cellular Component	actin filament	Interproscan
GO:0032432 all species →	Cellular Component	actin filament bundle	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan
GO:0051017 all species →	Biological Process	actin filament bundle assembly	Interproscan
GO:0051639 all species →	Biological Process	actin filament network formation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000016640.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.