Gene detail

Detailed information of ENSQPTP00000016659.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031566629.1, protein-methionine sulfoxide oxidase mical3a-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000020385

ATGCCAGAGCAAAAGGAGTCTATGACTGACAATATAAGTCCTGTAAACTCACAGGATTCTATCTATACAATGGCCGCAGGAGCAAGAGCTTTATTGCTTTGGTCGAGGCAGCAAACTGAAGGATACAATGAAGTGAATATTTACAATATGACGAGCTCATGGCGAGATGGTCTTGCTTTTTGTGCAATTATTCATCGCTATCGACCCGATTTAATTGATTTCGCTAAGTTGTCGAAGGAAAACATCATCAAGAATAACAAAATGGCCTTTGACATCTGCGAGAGACATCTAGACATTCCATCGATCTTGGACATCCATGATATGATCGCCAAGCCAGTTCCTGATAAACTCGGCGTAATCACGTTCGTTTCGCAGCTTTTTAATCACTTCAAGGATAAAATACCAGCAAATCAAGTAGTGTCCACTAAAATGAGTTCCACGATGAAAGCCAAAAGCGATCTCTCACTATCAGGAAAAGCTGGCAAACGCGCTTCGAATCGTAACCATGCCCTTCAAGGCAAGGCTAAGAAGATCTCCTCAGCTCTGAAGAATGTCTTCCGTTCAGACAACAAAGAGGACCGCCTAAAAGTTGACGACACGCTGATCAAATCCCCAAGCACTGAGAACCTCAAAACTGCTTCAGAAAATgaCAAGAAAACAGATACCATTCATCCCCCGAGCATGGCTCCCCGTCTACCTTATCTTGGAACTAAGTGCTCCATCTGTGAAGAGAAAGTGTACATCATTGAAAGACTTGTAGCAGAGCAAAGGCTGTTCCATCGAGCTTGCTTTAAATGCAGTAAATGTGATTCTGTGTTGACTCCTGGGACGTATTCTTATTGTCCAGAAACTGAAACGTTCTGCTGTATTTATGAATGCATGGGAGACTTCAGAAAGAAGCAAGACGACATTAAGATCAAACTTCAGCCAATCACGGATAAGGTATTCGACGTGCTAGAAAAAGCTGACACATCACACACTAGAAAATCATCCTTGGACTCGCGTTCTCGAAGCAACAGTCTAACTCCTCCCTTTTCAATCGTCAAAAAGAATTCCATCACAATAGACTCTTTTCCAAAGAGCTTTGAGGATCTTTCGTCCACGAGGCGAAAAAACTCCAGTAGCCGACGACACTCTGTAGAGAAAAACATTCCAAAGGACACTCTTTCGGTCTCAATGAACTCGAAAATTGAGCTAAAGAAATCACAAAGCGACAACTCTCTTCCTACTAAAGGTGGACCTACTCAATTAGAAATTGAGGTTAAGAGAGAAAACGGTAAAGTTAAGTCTTGTGTGAGGATAAATCCAGTGAAACCAAAATTGTCTCCCCAGAATTCGCTACAAAAAGATGAAGGAGCCGATGCGGAATCGCCTGAAAAGACAAACAACCAACAGGATACTAAAGGAAAACAGGTTTGGAAGGAAAAAATCAAGGATTCTGTAGGATTAAATGATGCTTACAgcagagaagaagaagaaagaccaCAAGAAGGAAGCGTCCAGAAACTTCGCCAAAAGTTTATGAACATTGAAGACATAATTGAAAACAAACACAAGCAGAAACTCGCGAagaagaatgaaagaatgcaGAGGGAAATACGAAGGGTTGTCAGAAACTGGAATGAACAatcaaaaggaaaagaagactTGTCAAATGACCAGAAAAATGAGATGGAAAAAGAGGGGAAAAGAGTCGAGGACTCTGAAGAATCGAACAATTCATTGGGGACTTCTAGTGGACAAAGCAGCGCCAGTCACATGGATGACGCCATTAACGAATCACGTGATCTGTGCAACCAAACCAATCACATACTTGGAAACCCAGACGAAAATTCTAGAACTTCCAGTGAATCACAATCGCAGAAGATTAGTAATTCATCTCAAGCTAAAAGCAAACATTTGCCCAAATTGTCACCTTCAGAAAACCTAGGCTCTTCATCTTCCTCGACACCTTCTCCTACTAGAAGAACTATCCCTATTATCGTACGACCATCTgttgacagtgacagtgagaGAGACGAGAGCGAGAGAGAAAGAAGCTGCAGTCAAACATCCGTGTCATCAAATAACCGTCTATTTAGTCCGCCAATTAGCGACAGCTCTTCAATTCCTGACTCTCCGATCTCTCCAGTATCTTCGTACGAAACAAGATGGCCGAGTCAAAACTCTCTCgctgaaacaaactcttctTGCGATTCGCCGAAAATGTCCATCATAATAGCACAAGAATCTTCGTATACAAAAGTGAACAGTCGCTTTTTTACGGTAGAAACTTGTGAATGCAACACTAAAGGACTAGATGGGGATATTATTATCGAAGAAAACAGCGTTGAAACTATTGACATCGAGGGTGAATTTTATTTCGGTGTCGAAGGGAATAACTTTTCGAAAGCTCAGAATGATTATTTTAGGTCATTGAGGAACTGTAAAATTAAGAGAGAGAAGTCCGACTTGGTTCAAGAGGAAGAGATTGTGTTGTCGCCAACGGAGATGGTTGATGAGTTACAGGCGTTAGAAACGTTGCATGCGGAGTTGGAGAAGAGAGGGATTGAGATGGAGAAGATGCTAAGGACCACTATGGGATCTGAGCGACCTCTGGACAACGAGGAAGAGATACTAAAAGAGTGGTTAACACTGGTACAAGAGAAGAATATCATATCCAAAAGAGAATACGAATTGATTTACTTAATCAAATATCATCAGTATGAGGATCGATATTTAGCTGTGGAATGCGAGCTACGGGTGCTATTATCAATGAGAGATGAATTAAAATCTCCAGAAGACGTGAAACAAGAGCGGGCTTTGATGTCTGAATTATTCAAGCTTGTCCAGAGAAGGAGTTACATAGTAGACAAACTAGAGCAAGACAGGATAAGAGAAAGTCAAGAAGACGAGAGTATGAAAAACGTTAGTGAACAGGGTGGAAATGACGCCCCAGAGGAATCATGGGAAAACAAGCAGGATTACACAACAAAAGTTGCTTTTTCTAGATTCTATTGCTAA

Transcript

ENSQPTT00000020385

TACGAGTTTTTCAATCGCCTTCGAGTCAATCTTCATGTGATTTAACTTGAGTAATTGCTTCGTAGTCTTCTTCAGACAAGTTTTAATGCCAGAGCAAAAGGAGTCTATGACTGACAATATAAGTCCTGTAAACTCACAGGATTCTATCTATACAATGGCCGCAGGAGCAAGAGCTTTATTGCTTTGGTCGAGGCAGCAAACTGAAGGATACAATGAAGTGAATATTTACAATATGACGAGCTCATGGCGAGATGGTCTTGCTTTTTGTGCAATTATTCATCGCTATCGACCCGATTTAATTGATTTCGCTAAGTTGTCGAAGGAAAACATCATCAAGAATAACAAAATGGCCTTTGACATCTGCGAGAGACATCTAGACATTCCATCGATCTTGGACATCCATGATATGATCGCCAAGCCAGTTCCTGATAAACTCGGCGTAATCACGTTCGTTTCGCAGCTTTTTAATCACTTCAAGGATAAAATACCAGCAAATCAAGTAGTGTCCACTAAAATGAGTTCCACGATGAAAGCCAAAAGCGATCTCTCACTATCAGGAAAAGCTGGCAAACGCGCTTCGAATCGTAACCATGCCCTTCAAGGCAAGGCTAAGAAGATCTCCTCAGCTCTGAAGAATGTCTTCCGTTCAGACAACAAAGAGGACCGCCTAAAAGTTGACGACACGCTGATCAAATCCCCAAGCACTGAGAACCTCAAAACTGCTTCAGAAAATgaCAAGAAAACAGATACCATTCATCCCCCGAGCATGGCTCCCCGTCTACCTTATCTTGGAACTAAGTGCTCCATCTGTGAAGAGAAAGTGTACATCATTGAAAGACTTGTAGCAGAGCAAAGGCTGTTCCATCGAGCTTGCTTTAAATGCAGTAAATGTGATTCTGTGTTGACTCCTGGGACGTATTCTTATTGTCCAGAAACTGAAACGTTCTGCTGTATTTATGAATGCATGGGAGACTTCAGAAAGAAGCAAGACGACATTAAGATCAAACTTCAGCCAATCACGGATAAGGTATTCGACGTGCTAGAAAAAGCTGACACATCACACACTAGAAAATCATCCTTGGACTCGCGTTCTCGAAGCAACAGTCTAACTCCTCCCTTTTCAATCGTCAAAAAGAATTCCATCACAATAGACTCTTTTCCAAAGAGCTTTGAGGATCTTTCGTCCACGAGGCGAAAAAACTCCAGTAGCCGACGACACTCTGTAGAGAAAAACATTCCAAAGGACACTCTTTCGGTCTCAATGAACTCGAAAATTGAGCTAAAGAAATCACAAAGCGACAACTCTCTTCCTACTAAAGGTGGACCTACTCAATTAGAAATTGAGGTTAAGAGAGAAAACGGTAAAGTTAAGTCTTGTGTGAGGATAAATCCAGTGAAACCAAAATTGTCTCCCCAGAATTCGCTACAAAAAGATGAAGGAGCCGATGCGGAATCGCCTGAAAAGACAAACAACCAACAGGATACTAAAGGAAAACAGGTTTGGAAGGAAAAAATCAAGGATTCTGTAGGATTAAATGATGCTTACAgcagagaagaagaagaaagaccaCAAGAAGGAAGCGTCCAGAAACTTCGCCAAAAGTTTATGAACATTGAAGACATAATTGAAAACAAACACAAGCAGAAACTCGCGAagaagaatgaaagaatgcaGAGGGAAATACGAAGGGTTGTCAGAAACTGGAATGAACAatcaaaaggaaaagaagactTGTCAAATGACCAGAAAAATGAGATGGAAAAAGAGGGGAAAAGAGTCGAGGACTCTGAAGAATCGAACAATTCATTGGGGACTTCTAGTGGACAAAGCAGCGCCAGTCACATGGATGACGCCATTAACGAATCACGTGATCTGTGCAACCAAACCAATCACATACTTGGAAACCCAGACGAAAATTCTAGAACTTCCAGTGAATCACAATCGCAGAAGATTAGTAATTCATCTCAAGCTAAAAGCAAACATTTGCCCAAATTGTCACCTTCAGAAAACCTAGGCTCTTCATCTTCCTCGACACCTTCTCCTACTAGAAGAACTATCCCTATTATCGTACGACCATCTgttgacagtgacagtgagaGAGACGAGAGCGAGAGAGAAAGAAGCTGCAGTCAAACATCCGTGTCATCAAATAACCGTCTATTTAGTCCGCCAATTAGCGACAGCTCTTCAATTCCTGACTCTCCGATCTCTCCAGTATCTTCGTACGAAACAAGATGGCCGAGTCAAAACTCTCTCgctgaaacaaactcttctTGCGATTCGCCGAAAATGTCCATCATAATAGCACAAGAATCTTCGTATACAAAAGTGAACAGTCGCTTTTTTACGGTAGAAACTTGTGAATGCAACACTAAAGGACTAGATGGGGATATTATTATCGAAGAAAACAGCGTTGAAACTATTGACATCGAGGGTGAATTTTATTTCGGTGTCGAAGGGAATAACTTTTCGAAAGCTCAGAATGATTATTTTAGGTCATTGAGGAACTGTAAAATTAAGAGAGAGAAGTCCGACTTGGTTCAAGAGGAAGAGATTGTGTTGTCGCCAACGGAGATGGTTGATGAGTTACAGGCGTTAGAAACGTTGCATGCGGAGTTGGAGAAGAGAGGGATTGAGATGGAGAAGATGCTAAGGACCACTATGGGATCTGAGCGACCTCTGGACAACGAGGAAGAGATACTAAAAGAGTGGTTAACACTGGTACAAGAGAAGAATATCATATCCAAAAGAGAATACGAATTGATTTACTTAATCAAATATCATCAGTATGAGGATCGATATTTAGCTGTGGAATGCGAGCTACGGGTGCTATTATCAATGAGAGATGAATTAAAATCTCCAGAAGACGTGAAACAAGAGCGGGCTTTGATGTCTGAATTATTCAAGCTTGTCCAGAGAAGGAGTTACATAGTAGACAAACTAGAGCAAGACAGGATAAGAGAAAGTCAAGAAGACGAGAGTATGAAAAACGTTAGTGAACAGGGTGGAAATGACGCCCCAGAGGAATCATGGGAAAACAAGCAGGATTACACAACAAAAGTTGCTTTTTCTAGATTCTATTGCTAAATGAGTGCTCAGTGATCAAACCACAGGGAACTCActtcaaataaaaaagattgaaTTTTTGGGGTGCGACCACAAAACTAAAATACTTTGAGAAATAACAacgaaacagccgccatgttggttaaaCTAACTGAAGCACTGCTAAGGATATGATATGTAAATTTAATAGACAAAGAAAAGTAATCCCAATAGATTTGAATTTGGTAAAACATTGCGTTAGCTGAATAGCCCAATTCTATACTTTGCTTACCACACACAAAGGTTTAAGTTTGAGGCTACGTGCGAAAATGCATTCTTTTCTCCTTTCAAGAATCActgtaaagtaaagtaaagtacatatatttaaagtcggtagttccttcagttgaaattcaactgctatcaatggaagccgacggtgcgcactttaccccctctctccatcagtgctttgttttaagagtattcaaagctgaagcggattagagagaagtcgaaacagacgtggagaTCCTGAGGATCGAACCGTACGTGAACCTCAAGCTTGAAGGTCGCGCACTAACCAAACTGAGCTAAGCTTGCTCCTGAGCATTAAGCATGAAGCCTCGCATTGAatcctttgtgcgtgacaagcgaagcatatttCGGTAGTGAATTATTGGTCTTTTTCAAGAATATTAGGACCCAGCATACCAAACATACCAGAGTTTCTGCACATATCAATCATACCAAGCATTCTATATCGTGAACTATTAATTTTTATTCTGTGTTATATAATTTTGAACTCACTGATATAATGTTTCTAGGGTGCTGTTTAAATATTGAAGTctaactttatttttaaatactgcTAAAATAAGGTCATGACATAGTTGTTCACGTGTAATGCTCGATGGCAATAAAAATGTTGGGGCGCACTCCAATGACCGCCATCTTGT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
D3ZQL6	MICAL-like protein 1 OS=Rattus norvegicus OX=10116 GN=Micall1 PE=1 SV=1
Q8IY33	MICAL-like protein 2 OS=Homo sapiens OX=9606 GN=MICALL2 PE=1 SV=1
Q8BGT6	MICAL-like protein 1 OS=Mus musculus OX=10090 GN=Micall1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008221 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00307 all species →	CH	Calponin homology (CH) domain	Domain	Interproscan
PF12130 all species →	bMERB_dom	Bivalent Mical/EHBP Rab binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001781 all species →	Domain	Zinc finger, LIM-type	Interproscan
IPR001715 all species →	Domain	Calponin homology domain	Interproscan
IPR022735 all species →	Domain	bMERB domain	Interproscan
IPR050540 all species →	Family	F-actin Monooxygenase Mical	Interproscan
IPR036872 all species →	Homologous_superfamily	CH domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23167 all species →	CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19948	MICALL1; MICAL-like protein 1	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.