Gene detail

Detailed information of ENSQPTP00000016895.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031562291.1, probable cytosolic Fe-S cluster assembly factor v1g210509 [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A2RRV9	Cytosolic Fe-S cluster assembly factor narfl OS=Danio rerio OX=7955 GN=narfl PE=2 SV=1
A8WH18	Cytosolic Fe-S cluster assembly factor narfl OS=Xenopus tropicalis OX=8364 GN=narfl PE=2 SV=1
Q5BK18	Cytosolic iron-sulfur assembly component 3 OS=Rattus norvegicus OX=10116 GN=Ciao3 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005194 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02906 all species →	Fe_hyd_lg_C	Iron only hydrogenase large subunit, C-terminal domain	Domain	Interproscan
PF02256 all species →	Fe_hyd_SSU	Iron hydrogenase small subunit	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003149 all species →	Domain	Iron hydrogenase, small subunit	Interproscan
IPR009016 all species →	Homologous_superfamily	Iron hydrogenase	Interproscan
IPR004108 all species →	Domain	Iron hydrogenase, large subunit, C-terminal	Interproscan
IPR036991 all species →	Homologous_superfamily	Iron hydrogenase, small subunit superfamily	Interproscan
IPR050340 all species →	Family	Cytosolic Fe-S Cluster Assembly Factor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11615 all species →	NITRATE, FORMATE, IRON DEHYDROGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016226 all species →	Biological Process	iron-sulfur cluster assembly	Interproscan
GO:0097361 all species →	Cellular Component	cytosolic [4Fe-4S] assembly targeting complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000016895.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.