Gene detail

Detailed information of ENSQPTP00000017221.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031559642.1, probable C-mannosyltransferase DPY19L3 [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000021054

ATGCGCAACAGGTTGACATTGTTATTAATATATCACCTGGTGCTATACGACTCACCTTTACCAGTTCGTGAGTCTACAGAACAACTAAATTTCTATGAATTTGTACAATTCACTATGAGTGAAGTTAGAAGACGAAAGATCGGAGCTCAAAATAATAatcacaaaaaagaaaatgttgaaTCAGAAAGCACCAAAATCAACAAGGCAGGAAACGGTAGCGACATAAATCTCCTAGCTGTACTTCAAGTTGTGTTTGGTTTGCTGATCGCGGTTGCTGTAGGTTACAAATATGCTCTGTACATTAAAGAATTGCACGAGAACGATATGTGGTTCTCTAATATCGGGCAAATAGAACGTGAAATATCATTTCGTACAGAGTCTGGcttgtatttttcatattacAAGCAACTGGTATTGGCACCAACAATATCGCAAGGGCTTTATGATCTTACCCATGATAATGCCACAGAACATCTAAGAACTATTAATATTTTGGAACGATTTAATGTTTACCAAGAGGTTATTCTGGCTGTACTATACAGAATCTTACCTTTTCAGGATACTTATGAATatgtttatttttacattGACACCATATTTGGTCTTCATGGATTATACATGGTTGCTTTGTTTGTATCGTCATGGATACTGAGTGGTTCATTCTTAGCTGGTCTCCTAGCAACAtgcttttttatctttaacAGGCATGACACAACCAGGATTTCCTTCACCATGCCACTCCGTGAAAGCTTTGGCTTTCCATTCTTATTTTCCCAAATTGCATTCATAACTTATTACCTGAAAAGAGATATCTCAAAAACAgccgagGTGATATGCATTTTCTTCATATTCTGCTGCACGTTTTTCTTCACGCTAGTCTGGCAATTTGCGCAGTTTATCTTGTTGCTGCAGAGCATGACCTTCTTTGGAGTTTATGCACTGGGCTTTGCTCCAAAAACAAAGATCAGAAATCTGTACTTGTCTGTTATATTTTCTATTACAAGCGTTTGTCTGCTGATGTTTATCAATGACATGATGCTTTGTTCCCTTGCCTTGTCTTTCTGTATCAGTGCTCTGTTGCTTATGGCTTTCCAGGAAGACAATCCTTGTGCTAGTTCTTTTGTTGTAAAGGCGTTCAGACTGTTGTTGCACATCGTATCAGTGCTTGTTCTAATGATGGGTATCAGTACTGTCATCAAGGTTGTCATGCGGGTGGAGTCCGATGAACACATTTTCAAGTTCGTAAAAGCCAAGTTAGGTTTTGACATCGGAAGGGATTTCGATGGATTGCTGTATCTTTGCGAAGCTGCTTTTCAAATGTTGCCCTTGGATACGTACCCTAGACTCACTAAAGGCGTTGTCTTTCCTTGTTACATCATATCTCTGGTTATTGTGCTGCAAATTCTGGCCTATACTGTTTTCTCTAACTGGAGCAAAAATGATGACGACAAAGATAAAATTACGAAAGCCCCAAAGTCCGCCCTCCCCTCCCTGGATCTGAATGATCAGCCAGAATTGGTCTACAACACTATCCAGACTGTTCTCTTTGGTATCATGGCCGTATCGACTCTACGCTTCAAGTTTCTGTGGACACCACACATGTGTATGTATGCGGCTGGCGTGTTCTGTCATCAAGGATTCTGGAGATTCCTCATGAGCAAGATTGGTATTAAACCAGCTATTaATAAAGTACTGAGTCACTCCGTACCTGCAATCTTGATAGCCTTACTGCTCAGCCTGCGACTACCCAAAGCTCTTCAGGAGCTCGCAGAACTGAAGGAGTTCCACGATCCCGATACAGTACAGCTGATGAACTGGATAAGAGCTGAAACACCCCCTGGTTCATCATTTACTGGCAGCATGCAGCTTCTGGCTGCTGTGAAGCTGTGTACGGACAGACACATCACCAACCATCCTCATTATGAGAACAAGTTCCTCAGGGAGAGAACAAAACAGGTTTATCAAGTTTACGCACGCagaaaaccacaggaagcccactcAATACTGAAGAAACACGGCGCCGACTACGTCATATTGGAAAACAGCATATGCTTCTCCCGTCAGCCTTCAGGCTGCAAACTCAAAGATATTTTAGACATGGATAATGGTCACGTGATTGAAGGTGGCCAACCAGAGCCAGGCTTGACATTTACTAACGTTCCTCGTTTTTGTGAAGCCATAAAATACGATCAAAAGAATTTTGCTCGATACTTTAGGAAGGTATTTGAGAACCGAACTTTCTATTTGTATAAAGTGTTATGA

Transcript

ENSQPTT00000021054

GACAGCCTGGAGTATCAAaatttattactttttttctaAGAAATAGAAAGTTGATATCTCGAAAAATATATCTCGAAGCATAACTGTTTTTGCGCCACGTGTGATGTTGTGAGAGGTAAGTACCACGCATGCGCAACAGGTTGACATTGTTATTAATATATCACCTGGTGCTATACGACTCACCTTTACCAGTTCGTGAGTCTACAGAACAACTAAATTTCTATGAATTTGTACAATTCACTATGAGTGAAGTTAGAAGACGAAAGATCGGAGCTCAAAATAATAatcacaaaaaagaaaatgttgaaTCAGAAAGCACCAAAATCAACAAGGCAGGAAACGGTAGCGACATAAATCTCCTAGCTGTACTTCAAGTTGTGTTTGGTTTGCTGATCGCGGTTGCTGTAGGTTACAAATATGCTCTGTACATTAAAGAATTGCACGAGAACGATATGTGGTTCTCTAATATCGGGCAAATAGAACGTGAAATATCATTTCGTACAGAGTCTGGcttgtatttttcatattacAAGCAACTGGTATTGGCACCAACAATATCGCAAGGGCTTTATGATCTTACCCATGATAATGCCACAGAACATCTAAGAACTATTAATATTTTGGAACGATTTAATGTTTACCAAGAGGTTATTCTGGCTGTACTATACAGAATCTTACCTTTTCAGGATACTTATGAATatgtttatttttacattGACACCATATTTGGTCTTCATGGATTATACATGGTTGCTTTGTTTGTATCGTCATGGATACTGAGTGGTTCATTCTTAGCTGGTCTCCTAGCAACAtgcttttttatctttaacAGGCATGACACAACCAGGATTTCCTTCACCATGCCACTCCGTGAAAGCTTTGGCTTTCCATTCTTATTTTCCCAAATTGCATTCATAACTTATTACCTGAAAAGAGATATCTCAAAAACAgccgagGTGATATGCATTTTCTTCATATTCTGCTGCACGTTTTTCTTCACGCTAGTCTGGCAATTTGCGCAGTTTATCTTGTTGCTGCAGAGCATGACCTTCTTTGGAGTTTATGCACTGGGCTTTGCTCCAAAAACAAAGATCAGAAATCTGTACTTGTCTGTTATATTTTCTATTACAAGCGTTTGTCTGCTGATGTTTATCAATGACATGATGCTTTGTTCCCTTGCCTTGTCTTTCTGTATCAGTGCTCTGTTGCTTATGGCTTTCCAGGAAGACAATCCTTGTGCTAGTTCTTTTGTTGTAAAGGCGTTCAGACTGTTGTTGCACATCGTATCAGTGCTTGTTCTAATGATGGGTATCAGTACTGTCATCAAGGTTGTCATGCGGGTGGAGTCCGATGAACACATTTTCAAGTTCGTAAAAGCCAAGTTAGGTTTTGACATCGGAAGGGATTTCGATGGATTGCTGTATCTTTGCGAAGCTGCTTTTCAAATGTTGCCCTTGGATACGTACCCTAGACTCACTAAAGGCGTTGTCTTTCCTTGTTACATCATATCTCTGGTTATTGTGCTGCAAATTCTGGCCTATACTGTTTTCTCTAACTGGAGCAAAAATGATGACGACAAAGATAAAATTACGAAAGCCCCAAAGTCCGCCCTCCCCTCCCTGGATCTGAATGATCAGCCAGAATTGGTCTACAACACTATCCAGACTGTTCTCTTTGGTATCATGGCCGTATCGACTCTACGCTTCAAGTTTCTGTGGACACCACACATGTGTATGTATGCGGCTGGCGTGTTCTGTCATCAAGGATTCTGGAGATTCCTCATGAGCAAGATTGGTATTAAACCAGCTATTaATAAAGTACTGAGTCACTCCGTACCTGCAATCTTGATAGCCTTACTGCTCAGCCTGCGACTACCCAAAGCTCTTCAGGAGCTCGCAGAACTGAAGGAGTTCCACGATCCCGATACAGTACAGCTGATGAACTGGATAAGAGCTGAAACACCCCCTGGTTCATCATTTACTGGCAGCATGCAGCTTCTGGCTGCTGTGAAGCTGTGTACGGACAGACACATCACCAACCATCCTCATTATGAGAACAAGTTCCTCAGGGAGAGAACAAAACAGGTTTATCAAGTTTACGCACGCagaaaaccacaggaagcccactcAATACTGAAGAAACACGGCGCCGACTACGTCATATTGGAAAACAGCATATGCTTCTCCCGTCAGCCTTCAGGCTGCAAACTCAAAGATATTTTAGACATGGATAATGGTCACGTGATTGAAGGTGGCCAACCAGAGCCAGGCTTGACATTTACTAACGTTCCTCGTTTTTGTGAAGCCATAAAATACGATCAAAAGAATTTTGCTCGATACTTTAGGAAGGTATTTGAGAACCGAACTTTCTATTTGTATAAAGTGTTATGACGGCTGTTGTAAACGTCTGCGGCCTGTATATTAGCTAGCCATACTAGTTTTGGTACGTAGTGGGTTTCTATATTTTAGAGAATAGCAAAATGCTCAGTAATGTAAAGAAAACATGAAAACGTTTGCGCAACACGAAGAGAGTAATAAGTAAGGCAGTAATAAACGTATAATAATAGTTTCACTGGGTGCTTGACTCTTAATCGCCCTTTCTTCCTGTCTAAActttcttccaaaaattgtaaTTTCTATTTGGTTCTTGGTGAGACACCCTCCCTCAACCTCTAGTTTGTTAGAATTataactataaataaatataatttgcaGAACAGTATTAATTTCTTTTCTAATACAAAGTctatttaaataaagaaatatcatTTGTTCGTCACTTACAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q71B07	Protein C-mannosyl-transferase DPY19L3 OS=Mus musculus OX=10090 GN=Dpy19l3 PE=1 SV=2
Q5RCJ4	Protein C-mannosyl-transferase DPY19L3 OS=Pongo abelii OX=9601 GN=DPY19L3 PE=2 SV=2
Q6ZPD9	Protein C-mannosyl-transferase DPY19L3 OS=Homo sapiens OX=9606 GN=DPY19L3 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004156 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10034 all species →	Dpy19	Q-cell neuroblast polarisation	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018732 all species →	Family	Dpy-19/Dpy-19-like	Interproscan
IPR047462 all species →	Family	C-mannosyltransferase Dpy19	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31488 all species →	DPY-19-LIKE 1, LIKE (H. SAPIENS)	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0000030 all species →	Molecular Function	mannosyltransferase activity	Interproscan
GO:0018406 all species →	Biological Process	protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan	Interproscan
GO:0005637 all species →	Cellular Component	nuclear inner membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24553	DPY19L; C-mannosyltransferase DPY19L	EC:2.4.1.-	Glycosyltransferases	ko01003	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.