Gene detail

Detailed information of ENSQPTP00000017680.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031552726.1, E3 ubiquitin-protein ligase MYLIP-like [Actinia tenebrosa]
Species Actinia mediterranea · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000021647

CAATTTTCTATTCATGCAGAAGAGAGGCTCAGAAAAACCTACCAAAAACCTATTTTAATCGGCTCTCAGTCATAGATAAAAAGCATAGGAGCTAGGAAAAAATATGTGGTGCTTTGTATCAGAGCCCAATGGCATTAtccatgaaatatttttgcctAGAAACTCGGTAGGACAAGAGTGCTTTGATAAGGTTTGCGAAAAACTTCGCCTTGTTGAGAAAGATTATTTTGGTTTGCAGTACAATGGGCCAAACGGTGTTCGTCTTTGGCTCAACATGAGAAATGCAATGTCTGTACAACTAAGCGGAAAACCTCCATACAGACTTTATCTTCTCGTGAAATTTTTCGTTAAGCCTCAAGAACTACAGCAAGAAATATCGAGAAATTTGTTTTACTTAACTCTAAAGACCTTTGTCAGCCATGGAAAGATAGACTTGTCAAACTCACAAACCAAAACAATTGCAAGACTTTGCGCTCTCACTGCTCAAATTGATTCTGGAGATTTCATCCCAGAAAAACCGCCGCAATATTCAACATTTATTCCCAAAGCTCTCTACAATTTTTATAGCAAAACTTCGGATTTACAAAAAGATGCTGCTTCTGAACATACTCAATTATTACGCACTCCTGTGAATGAAGCGAAAGTAGAATATCTGCATTTGTTGGCTAATGTTCCTGGATACGGAATTGAtgtttttaaaggaaaaatgtCTAAAGAAAAATGCACAAAAAAGGTCGAAATCTGTGTTGGAAATGACGGAGTTAAAGTCTACAGCGTCTCTCAAGAATACGACGCCAAACAAAGCAGAGAAATTGTCAAAAAAATCGTCGaaaaaagGATAAACTTCGAGGATGTTTCAACAGTGTCTTACAACAACAGATGTTTCACAGTCGTTCACGGTAGTGGAACCCAGGCCCAGCGCGTCACCTACAAACTCAAGAGCGAATGTGACGCCGTCGCTTTGTTTCGAACATTCACAGAATTCCACACGTTTTACCAGTGTAATACGGTGAAGCGGTCTGTGGTAGACCAATGCACGCGAACACTTTTGGGACGACTTGTTTCAGTCGTTTTTCCGTCGAATGACTTTGGTAAGACTTACCTGTTTGATGTACAGCGGACTCGTCGACAGGCCTACAGTCATGCGTGGAATGAAATGAACAGCTATCGAAATACCAACATGTCACGTGTTACGGCCGGCAATAGCCGAAGTGGCTACTCGGTTTCCGAATTCCGGCCCGTACAATCTCCGCTCAGTCGTCGGAAATGTTCGGGCTCGAGGCAAAAGGATTTGGCTGAATTTGAGGAGCAAAACCTCACGGATTTGGATATCGAGGCAATGCAGCCAGAAGAACTAAAGAAAATGGTTCGACACATGCAAGACGCTCGGATTTGCCAGATTTGTATGGATGCGGAAGTGGCGACGGCCTTTTGTCCGTGTGGTCACGTGGTTTGCTGTGTGGAATGTTCGGCAATGTGCAAGGAATGTCCTTTATGTCGTAGCCAAATAACTTACGCCCAACGAGTCTTCTTTCCTTGCCAATGACAGCAAgcgattttatatttattatgacTAAAACCAATTCACGTGATTCTAGTAACTCAAGAAAATAAACTtggaaaaattatttattgatcTACACTAATTACCCCGAAAATGAcaatcaaaatacaaagacAAAATTATTTATACGAGGAAAATAAAACTATTGTCAACATTTGTATTTAATATCTCCCTGAGAAGCTTCAGCTTACGTTATAGTTGGCTATGAACTGAAAAAATTATATCTTGTTATTTAAAATTTGAGAGAACAAGGGTTTGTCCGTGTGTGTTtgtctattttttattgtgtaaGAATGACTTGTTAGTATGTCTATCAAACATTTGACTTACTAGCTTATGTTCCTGTGTATTTGTTGTCCGTTTATAGTATCAAGACTAGATTCCCATGAGCTCTTCGAATCAAAGAAATAAGACGAAATTTTCCTTAAAATTGAAGCtacttttaatttaattttacaaTATACTTTTTAATCAATGTAACTTATATTTAAGACACTAGAAAATCAATTTGTCATCGTAATATTGGTAGAATAGTTGATAAATGTTGTACATTAATTCTAAGTCTAGAAAGAATTCAGATTGCAAAACATAAAATATCAGAATTTTATCATGATTGTATTCATATGTGTTGAATGACTTGGTCTTCAATAATAGTAGACTGCGTCAGTGCATCGATTtcaaaaatggcgggaaaatggtgGACGCGCGCGTGTTTATAGAATTGATTGATAGAAAATATTACTAGAGCCGACTTTTATGCGAAGTACTAGATTTCAAAACTGAAGTCATAAAATGCCAAATCAGTTAGGGGAATTACAAGGGTGGTATCAGTGACAACTGGTGGACTTACTGTACCTCTCACCGAGATCTGGATTCCTGGTTCGATTCctggttcgattcctggacttgaGATCTCATCTTGTCCTCCAGCGTCTTCCTACTTTGTCATTTATCTGCGCCTGCCCAGAAACATGCATGTCA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6TEM9	E3 ubiquitin-protein ligase MYLIP-A OS=Danio rerio OX=7955 GN=mylipa PE=1 SV=2
Q05AK5	E3 ubiquitin-protein ligase MYLIP-B OS=Danio rerio OX=7955 GN=mylipb PE=2 SV=1
O43491	Band 4.1-like protein 2 OS=Homo sapiens OX=9606 GN=EPB41L2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002248 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00373 all species →	FERM_M	FERM central domain	Domain	Interproscan
PF13920 all species →	zf-C3HC4_3	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan
PF09379 all species →	FERM_N	FERM N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019748 all species →	Domain	FERM central domain	Interproscan
IPR001841 all species →	Domain	Zinc finger, RING-type	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR014352 all species →	Homologous_superfamily	FERM/acyl-CoA-binding protein superfamily	Interproscan
IPR000299 all species →	Domain	FERM domain	Interproscan
IPR011029 all species →	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR019749 all species →	Domain	Band 4.1 domain	Interproscan
IPR018979 all species →	Domain	FERM, N-terminal	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR035963 all species →	Homologous_superfamily	FERM superfamily, second domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23280 all species →	4.1 G PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005856 all species →	Cellular Component	cytoskeleton	Interproscan
GO:0004842 all species →	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0006511 all species →	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10637	MYLIP, MIR; E3 ubiquitin-protein ligase MYLIP	EC:2.3.2.27	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.