Gene detail

Detailed information of ENSQPTP00000018325.1 in Actinia mediterranea

Genomic Location: :...
NR annotation: PFX32582.1, putative 115 kDa protein [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSQPTT00000022510

atggcgtatgatcaaactcatccaacacttgctactatattgagtaatctaggattgaacctcagcgatctaggcaagcatgaagaagcacagaaatgtctcgagagagcattgactattaaagagatggcgtatgatcaaaatcgtccaacacttgctactacattgagtaatctaggatCGATTGTCCGTCATCTGGgattgaaccttCGTGATCTGGGCAAGGTTGAAGAAGCGCAAaaatgtctcgagagagcactgactattcaagagatggcgtatgatcaaaatcatccaacacttgctactacattgagtaatctaggatCGATTCTCCGTCATCTGGGCAAGTACGAAGAATCACAGAAAAtactcgagagagcattgactattcaagagatggggtatgatcaaaatcatccaacacttgctactacattaaTTAATATAGGATCGAACCTCCGCGATCTAAGCAAACatgaagaagcacagaaatgtctcgagaaagcattgactattgagGAGATAGCTCATCTGGGCAAGTATgaagaagcgcagaaatgtttcgagagagcattgactattcaagagatggcgtatgatcaaaatcatccaacacttgctactacattgagtaATCCAGGAACGAGCCACCGAGATCTGGGTAAGTATgaagaagcgcagaaatgtcttttgagagcattgactattcaagagatgacgtatgatcaaaatcatacAACACTTGCTATtacattgaGAACGAGCCACCGAGATCTGGGCAAGTATgaagaagcgcagaaatgtcttttgagagcattgactattcaagagatgactaatctaggattgaacctaATTGATCTGGGCAAGTACGAAGAATCGCAGAAATATCTCGAGAGAGCTTTGACTATtaaagagatggcgtatgatcaaaatcatccaacacttgctactacattgattaatctaggattgaacctccgTCATCTGGGCAAGTGTgaagaagcgcagaaatgtctcgagagagcattgactattgaagagatggcgtatgatcaaaatcatccaacacttgctactacattgagtaatctaggatCGATTCTCCTTGATATGTGGAAGTATGAAGAGGCgcagaaatgtctcgagagagcattgactattaaagagatggcgtatgatcaaaatcatccaacacttgctactacattgaataatctaggattgaGCTTTCGTGATCTGGagatggcgtatgatcaaaatcatccaacacttgctgcTACACTGAGTAATCTAGGATCGATTCTCCGTCATCTGGGCAAGTACGAAGAATCGCAGAATTATCTCGAGAGAGCTTTGACTATtaaagagatggcgtatgatcaaaatcatccaacacttgctactacattgagtaatctaggattgaacctctGTTTTCTGGGCAAGTATGAAAAAGCGCAGAAATGTTTTTTGAGAGCATTCAttattcaagagatggcgtatgatcaaaatcatccaacacttgctactacattgagtaatctaggatCGATTCTCCGTCATCTGGGCAAGTATGAAGAATCGCAGAAATATCTCGAGAGAGCTttgactattcaagagatggcCCGGATTTCAAAGTCGCAAACCACGAGTAGAGTTGAGACCATGGTCGATGTAGGGCCCGGAGTAGTGACCAGATCGAAGTCTAAACTgttaaaaacacaaaaaattcCCCAAAACCGGAAAATGCCGAAACTTCCATGcaggaagaaaaaggaatttgCAGTTGGAGATTCCACTGAAAGAGAAGTTATTGGTCACGAGCATTTACAGATATTGCTAAGCCCTCGTTCGACACGAAGTAAACACAGTTCATCGCACAATTCAAGGAAATCAAAGGCACCGAGTTCACCTAGTAAAAGAAGCATTATAAAGGCAAAAAAAGCAGCAAAGCGAGCAGAGATTCAATTGGAAGCGGCCAAAAACGAAGCGAAGCTACGGGAGAGAGCAATACTCCCATTTCGAGTTCacctttgctcaAAGAATTTAGTTCAAAGTTTTAAAGACCCAACACGAGTTACTGAAACATCAAAATCTATGATTGACTTAATCTTCGTGAACAATGAACATCGTTATACTGACAGTGGGGTGGTAAATCTATCTATCAGTGATCATTCTCTCATTTACTGCGTTCTTAAAGTTGGTAAACCTAAGGCAAGTCCCAGGACAGTGGAATACCGTTTTTATAAGAACTATGATCGCAAAGCCTTTTTGAAAGACCTGAAAGACGTTCCTTGGAACTTTGTGGAAGACAGTGACGACGTTGATGCATCAGTCCTAGCTTGGAATAAACTATTTCTCGATGTGGCTGATGCTCATGCTCCAGCCAAGAAACGGCGAATCAATGGTATCCAATGTCCATGGATgacttcaaaaataaaagaagcTATGCACAACCGTGACTTCCATCATCGTAAAGCTACAAGAACTGGCTCTTCCTATCATTGGCGAAAGTACCGTCATCTTCGTAACAACGTTAATAGCGATATAAAGCGCAGTAAGTCAAAGTACTACATCGACCTGATCAAAGACAGCAAGGGAAACGGGAACAATCTGTGGAAAGCAATCAATAAAGCTACCTGCCGGAAGCAGGATCAGACCTCTATTCCCAACTGCATAGTCTCCAATGGTGTTCAATATCTGGAGTCAAAGTCCATCGTCGACGTATTGAACAATCACTTTGCTTCCATTGGTCAACTTCTTGCAAAGAAAATCACCTCTCTTATTCCTGCCTTCTCACCCAATATCACTTCTGAGCCAGATCAAAGTTTCCATCTAAGTCCAGTCGATGAAACATTTGTTCTCAATCAATTAAAATCTCTCAAGACCAACAAGTCGATTGGATTGGACAACATTAGTGCTCGCCTTCTCAAGGATTCTGCAGATGTGATCGCTCAACCAGTTACTAATCTACTTAACTTATCTATCAAGCTCCACTCGTTTCCTTGTATTTGGAAATGTGCTAAGGTCATAGCCCTGTTTAAAACTGGGGATAGAACTGATGCCACCAACTATCGACCCATCTCTATTCTTCCGACTTTGAGCAAAATCCTCGAAAGAGCTGTCCACCTGCAACTCTACGAACATCTGAGTACAAACAATCTACTTTCTGACAAGCAGTTTGGCTTTCGACCTAAACGTTCAACATCAACTGCATTAGCCAGCCTTGCAGATGACATTCTACGTAACATGGATAACGGTAAACTATGTGGAGCTGTCTTCTTGGATCTGTCAAAAGCCTTTGACACAGTAAACCACACGATTCTAATGAATAAACTATCTTCAATGCTTACGCACTACTTGTGGCTTAGAAGTATCACAGCCATTACCATGCAACATTGGTGTACCTCAGGAAGTATCCTTGGGCCTCTTCTGTTCATCATCTACATCAACGATCTTCCTAATGTTGTCCGCCATTCTCAAGTATCCCTATACGCTGACGATACAGTCTTGTACTATTTCTCCTCCTCAGTTCCTGACATAGAAGATAAGCTTAATGAAGATCTCAAGCTGGTTGGTGATTGGTTTAAGATCAATCATTTGACCTTGAATGCAACCAAAACTAATGCCATGCTGTTTGGAAGCAAGAGAAAGACCAACATCTCCACCATCTCCATACAGGCCCACCTCAAAGACATCGAGAGAGTTCAAGAATTAAAGTACCTTGGTGTGGTCTTTTCCAGCAATATGTCTTGGTCTGCTCATGTTGAAAAACAGATGACCAAAATCAACAAACGTCTTGGTCTCCTGAGGCGAATCAAACATCTTTTGCCTAAATTCGCTAGACTCTTGTATTTCAACAGCTTGGTCCTACCGCTTTTTGATTATGGTGATATTGTTTGGGGAGATAAAGATAATATCACGCTTATGGAATCTCTTCAAACCCTGCACAACAAAGCGGCCAAGATCATCCTGGATCGACCTCCATACTCCTCAGCATCTGATGCTCGGAAAGAACTTAATTGGATGGAACTCAGTAAGCACAGATACTACCATCgatgtttatatatattcaaatgtaaaaacagattattatcatcaaatCTAAAGCTGAATAAGCTCAATGAGCATGGCTACAACACGAGGCATGGAAGCGAGTTTCGCTTACCACGACCCAAAATTAACTGGGGAAAACAAACAATGCAGTTTCAAGCCATGAAAGAATGGAACAATCTGAGTGACACTCTTAAACAGTGTTCTAATATCAACCATTTTAAATCGAATTTCTTTTAA

Transcript

ENSQPTT00000022510

Protein

Uniprot

Uniprot term	Description
Q9NBX4	Probable RNA-directed DNA polymerase from transposon X-element OS=Drosophila melanogaster OX=7227 GN=X-elementORF2 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF13374	TPR_10	Tetratricopeptide repeat	Repeat	Interproscan
PF13181	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR051787	Family	Effector and Ciliary Development-Associated Protein	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45641	TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan